Click here to switch to the map view.

The map label for this gene is yiaM [C]

Identifier: 23100859

GI number: 23100859

Start: 3540228

End: 3540734

Strand: Direct

Name: yiaM [C]

Synonym: OB3404

Alternate gene names: 23100859

Gene position: 3540228-3540734 (Clockwise)

Preceding gene: 23100858

Following gene: 23100860

Centisome position: 97.51

GC content: 38.46

Gene sequence:

>507_bases
GTGAAGAAGGTAAAACGCTGGTTTGATTTAGGACTATTAACCATTGCCAGCATCTTAATCTTATTTCTAGTTGTCGCAGC
AATATGGCAAGTGTTCACTAGATTCGTACTGCAAGACCCTAGTATTTCCACGCAGGAAGTATTACGTTTTTCATTAATCT
GGGTAGCCGTAATTGGCGCTACTTATGCATTTGGCCAGGATGAACATTTGTCCCTTACCTTTTTAAGAGACAAGATTACT
GGGCAAGCTCATAAAATCTTACGTTGGTTCATTGATTTACTTGTTATTGTATTTGCCTTATTTGTGATGGTGATTGGTGG
TTTTAATATTGCACAAGCAACCATGGCGGAACTGTCACCAATTTTGAATATGCCGATGGGATTCGTATATGGTGTTCTTC
CTATTTGTGGAGTCATCATCATTTTCTATCAAATCATCCATATTTCGGAACGACAGGGCATCGAACAATCCAATTCATTT
GAAAAGGGTGAGAATACATGGATGTAA

Upstream 100 bases:

>100_bases
CACTGTTAAAAGAACAAAGAGAAGCAAATGATGCGATCGACGCATTGCTTACAGAGATAGAAGCAATAGAGTAACCATAA
AGAAAGTTGGAGGGGTTCAC

Downstream 100 bases:

>100_bases
CTGTATGGACAGCCATTATATTATTTGGATCGTTTTTCTTACTCTTATTTATTGGCGTACCGATTGCCGTAAGTATCACT
ATTTCTTCTTTTGTGTCTAT

Product: C4-dicarboxylate transport system permease small protein

Products: NA

Alternate protein names: C4-Dicarboxylate Transport System Permease Small Protein; TRAP Transporter DctQ-Like Membrane Protein; C4-Dicarboxylate Transport System; Aspartate Kinase Monofunctional Class; TRAP Transporter Small Transmembrane Protein; 30S Ribosomal; TRAP-Type C4-Dicarboxylate Transport System; Membrane Transporter; TRAP Transporter DctQ Family Protein; C4-Dicarboxylate Transport System Permease; C4-Dicarboxylate Transport System Small Permease; TRAP Dicarboxylate Transporter DctQ Subunit; C4-Dicarboxylate Permease Small Protein; C4-Dicarboxylate Transporter Small Permease Component; ATP-Independent Transporter Subunit; Inner Membrane Protein; Tripartite ATP-Independent Periplasmic Transporter

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MKKVKRWFDLGLLTIASILILFLVVAAIWQVFTRFVLQDPSISTQEVLRFSLIWVAVIGATYAFGQDEHLSLTFLRDKIT
GQAHKILRWFIDLLVIVFALFVMVIGGFNIAQATMAELSPILNMPMGFVYGVLPICGVIIIFYQIIHISERQGIEQSNSF
EKGENTWM

Sequences:

>Translated_168_residues
MKKVKRWFDLGLLTIASILILFLVVAAIWQVFTRFVLQDPSISTQEVLRFSLIWVAVIGATYAFGQDEHLSLTFLRDKIT
GQAHKILRWFIDLLVIVFALFVMVIGGFNIAQATMAELSPILNMPMGFVYGVLPICGVIIIFYQIIHISERQGIEQSNSF
EKGENTWM
>Mature_168_residues
MKKVKRWFDLGLLTIASILILFLVVAAIWQVFTRFVLQDPSISTQEVLRFSLIWVAVIGATYAFGQDEHLSLTFLRDKIT
GQAHKILRWFIDLLVIVFALFVMVIGGFNIAQATMAELSPILNMPMGFVYGVLPICGVIIIFYQIIHISERQGIEQSNSF
EKGENTWM

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19113; Mature: 19113

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVKRWFDLGLLTIASILILFLVVAAIWQVFTRFVLQDPSISTQEVLRFSLIWVAVIGA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
TYAFGQDEHLSLTFLRDKITGQAHKILRWFIDLLVIVFALFVMVIGGFNIAQATMAELSP
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
ILNMPMGFVYGVLPICGVIIIFYQIIHISERQGIEQSNSFEKGENTWM
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKVKRWFDLGLLTIASILILFLVVAAIWQVFTRFVLQDPSISTQEVLRFSLIWVAVIGA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
TYAFGQDEHLSLTFLRDKITGQAHKILRWFIDLLVIVFALFVMVIGGFNIAQATMAELSP
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
ILNMPMGFVYGVLPICGVIIIFYQIIHISERQGIEQSNSFEKGENTWM
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA