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The map label for this gene is yedU [C]

Identifier: 23100806

GI number: 23100806

Start: 3486902

End: 3487588

Strand: Direct

Name: yedU [C]

Synonym: OB3351

Alternate gene names: 23100806

Gene position: 3486902-3487588 (Clockwise)

Preceding gene: 23100804

Following gene: 23100807

Centisome position: 96.04

GC content: 40.9

Gene sequence:

>687_bases
ATGAAAAAAGTACTAATCGCAGTGACAAGTGTCGCAAAATATCCAAATCTTGAACGCCCTACCGGATTATGGTTAGGAGA
AGCTGTACATTTTGCTGATGAAATGTACAACAAAGGGTACGAAATTGACTACGTAAGCCCTGAAGGCGGCTATACACCGA
TTGATCCAGAAAGCTTAAAACCTGATTTCATGAGTGATTTAGATTGGAAATATTATCAAGATAAATCCTTTATGAACAAA
TTAGGTAATACGTTGAAACCATCGGAAATTAACGCTGAAGATTACGAAGTGATTTATTATGCAGGTGGCCATGGAGTTAT
CTGGGACTTTAAAGACAATCAAGAGCTTCAAACAATCTCTAGCCAAATTTACAATTCCGATGGCATCGTATCATCTGTAT
GTCACGGCGCTATCGGCTTACTGAATATTCCTGGTAGCGACAAGGCTTACTTGATTGACGGTAAAAATGTCACTGGCTTC
ACCAATAGTGAAGAGGAAGCAGTAGGTTTAGCTGACCATGTCCCTTATCTAACGGAAGATGCGTTGAAAGAAAAAGGCGC
CAATTTCAAAGGCGAAGCAGACTGGTCTTCCTTTGCAGTTGTTGACGAACGCTTAGTGACCGGACAAAACCCGCAATCCG
GGAAAGCTGTAGCCGAGCAGGTATTGCGTATTTTAAATGCTAAATAA

Upstream 100 bases:

>100_bases
ACAAATTCAATATCATATTGCTTCATAAGCATTTCACTTCCTTTAAACCATAGTTTAAGCGATACAATGCAAATATACAA
AAGTTAAGGAGGTCCATACC

Downstream 100 bases:

>100_bases
GTGTACGGAGAAAACATGGGTGGTATGTGATATCACTCATGTTTATTATGTGTGATTTTGACCTGGGTGATTTTCTAAAT
CCACCCACATCATATTTATT

Product: hypothetical protein

Products: NA

Alternate protein names: ThiJ/PfpI Domain-Containing Protein; ThiJ/PfpI Domain Protein; ThiJ/PfpI; Intracellular Protease/Amidase; DJ-1/PfpI Family Protein; NonF-Related Protein; DJ-1/PfpI Family; Peptidase; DJ-1/PfPI Family Protein; Intracellular Protease/Amidase ThiJ/PfpL Family; Exported Pfp1 Family Protein; C56 Family Peptidase; Chaperone Protein; Thij/Pfpi Domain-Containing Protein; Amidotransferase; PFPI-Like Cystiene Protease; Protease I; Transcriptional Regulator Fis Family; Intracellular Protease Amidase; Protease; Intracellular Protease/Amidase ThiJ/PfpL Family Protein; ThiJ/PfpI Protein; Regulatory Protein; Pfp1 Family Protein; Fis Family Transcriptional Regulator; NonF Protein; ThiJ Protein

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MKKVLIAVTSVAKYPNLERPTGLWLGEAVHFADEMYNKGYEIDYVSPEGGYTPIDPESLKPDFMSDLDWKYYQDKSFMNK
LGNTLKPSEINAEDYEVIYYAGGHGVIWDFKDNQELQTISSQIYNSDGIVSSVCHGAIGLLNIPGSDKAYLIDGKNVTGF
TNSEEEAVGLADHVPYLTEDALKEKGANFKGEADWSSFAVVDERLVTGQNPQSGKAVAEQVLRILNAK

Sequences:

>Translated_228_residues
MKKVLIAVTSVAKYPNLERPTGLWLGEAVHFADEMYNKGYEIDYVSPEGGYTPIDPESLKPDFMSDLDWKYYQDKSFMNK
LGNTLKPSEINAEDYEVIYYAGGHGVIWDFKDNQELQTISSQIYNSDGIVSSVCHGAIGLLNIPGSDKAYLIDGKNVTGF
TNSEEEAVGLADHVPYLTEDALKEKGANFKGEADWSSFAVVDERLVTGQNPQSGKAVAEQVLRILNAK
>Mature_228_residues
MKKVLIAVTSVAKYPNLERPTGLWLGEAVHFADEMYNKGYEIDYVSPEGGYTPIDPESLKPDFMSDLDWKYYQDKSFMNK
LGNTLKPSEINAEDYEVIYYAGGHGVIWDFKDNQELQTISSQIYNSDGIVSSVCHGAIGLLNIPGSDKAYLIDGKNVTGF
TNSEEEAVGLADHVPYLTEDALKEKGANFKGEADWSSFAVVDERLVTGQNPQSGKAVAEQVLRILNAK

Specific function: Not Known. [C]

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6320742, Length=235, Percent_Identity=33.1914893617021, Blast_Score=120, Evalue=2e-28,
Organism=Saccharomyces cerevisiae, GI6324967, Length=237, Percent_Identity=29.957805907173, Blast_Score=100, Evalue=1e-22,
Organism=Saccharomyces cerevisiae, GI6324975, Length=237, Percent_Identity=29.535864978903, Blast_Score=100, Evalue=2e-22,
Organism=Saccharomyces cerevisiae, GI6323984, Length=237, Percent_Identity=29.1139240506329, Blast_Score=100, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25216; Mature: 25216

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVLIAVTSVAKYPNLERPTGLWLGEAVHFADEMYNKGYEIDYVSPEGGYTPIDPESLK
CCEEEEEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHCC
PDFMSDLDWKYYQDKSFMNKLGNTLKPSEINAEDYEVIYYAGGHGVIWDFKDNQELQTIS
CHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCHHHHHH
SQIYNSDGIVSSVCHGAIGLLNIPGSDKAYLIDGKNVTGFTNSEEEAVGLADHVPYLTED
HHHHCCCCHHHHHHHCCEEEEECCCCCCEEEEECCCCCCCCCCCHHHCCHHHCCCHHHHH
ALKEKGANFKGEADWSSFAVVDERLVTGQNPQSGKAVAEQVLRILNAK
HHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKVLIAVTSVAKYPNLERPTGLWLGEAVHFADEMYNKGYEIDYVSPEGGYTPIDPESLK
CCEEEEEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHCC
PDFMSDLDWKYYQDKSFMNKLGNTLKPSEINAEDYEVIYYAGGHGVIWDFKDNQELQTIS
CHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCHHHHHH
SQIYNSDGIVSSVCHGAIGLLNIPGSDKAYLIDGKNVTGFTNSEEEAVGLADHVPYLTED
HHHHCCCCHHHHHHHCCEEEEECCCCCCEEEEECCCCCCCCCCCHHHCCHHHCCCHHHHH
ALKEKGANFKGEADWSSFAVVDERLVTGQNPQSGKAVAEQVLRILNAK
HHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA