Click here to switch to the map view.

The map label for this gene is ybaN [H]

Identifier: 23100804

GI number: 23100804

Start: 3485759

End: 3486142

Strand: Direct

Name: ybaN [H]

Synonym: OB3349

Alternate gene names: 23100804

Gene position: 3485759-3486142 (Clockwise)

Preceding gene: 23100803

Following gene: 23100806

Centisome position: 96.01

GC content: 31.25

Gene sequence:

>384_bases
ATGAAATCTATAAAAAAAGCATTTTTACTAATCATAGGCTCTATTTCGTTAGGACTTGGTGTATTAGGGATAATATTGCC
ATTATTACCGACAACACCATTACTTTTACTTTCAGCTGCTTGTTATATCCGCAGTTCGGATAAATTATATCAATGGCTAA
TCACGAACAAATACGTCGGATCCTATATATTAAATTATCGCTCAGGAAAAGGAATACCACTAAAAGCGAAGATTATTGGT
GTTAGTCTATTGTGGATTTCAATACTTTATACCATTATTTTTGTTGTTCCTTTAGTAATCGTGAAAATTCTTTTATTCCT
AATCGCTTCTTATTTTACCTGGTTTATTTTAAAACAGAAAACCTTTCGGGAAATAGGCAATTGA

Upstream 100 bases:

>100_bases
TATTCTTTTCATCACGATTATTACATTAATGATCTTAAAACCGTTTTAGCAGTATAGGAATTTATATAAAAAGCAAGACG
ATGCGAGTAGGTGGTTGTTT

Downstream 100 bases:

>100_bases
TATAAAGAGTACAGATTAATGAATATCATCACCTTCGTAAATTACAGTTTTCTTTTTCGTTATAATTGGGTAGAATAAAA
GTAAATACTCATACAATATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MKSIKKAFLLIIGSISLGLGVLGIILPLLPTTPLLLLSAACYIRSSDKLYQWLITNKYVGSYILNYRSGKGIPLKAKIIG
VSLLWISILYTIIFVVPLVIVKILLFLIASYFTWFILKQKTFREIGN

Sequences:

>Translated_127_residues
MKSIKKAFLLIIGSISLGLGVLGIILPLLPTTPLLLLSAACYIRSSDKLYQWLITNKYVGSYILNYRSGKGIPLKAKIIG
VSLLWISILYTIIFVVPLVIVKILLFLIASYFTWFILKQKTFREIGN
>Mature_127_residues
MKSIKKAFLLIIGSISLGLGVLGIILPLLPTTPLLLLSAACYIRSSDKLYQWLITNKYVGSYILNYRSGKGIPLKAKIIG
VSLLWISILYTIIFVVPLVIVKILLFLIASYFTWFILKQKTFREIGN

Specific function: Unknown

COG id: COG2832

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786674, Length=110, Percent_Identity=33.6363636363636, Blast_Score=69, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007401 [H]

Pfam domain/function: PF04304 DUF454 [H]

EC number: NA

Molecular weight: Translated: 14263; Mature: 14263

Theoretical pI: Translated: 10.64; Mature: 10.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSIKKAFLLIIGSISLGLGVLGIILPLLPTTPLLLLSAACYIRSSDKLYQWLITNKYVG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
SYILNYRSGKGIPLKAKIIGVSLLWISILYTIIFVVPLVIVKILLFLIASYFTWFILKQK
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFREIGN
HHHHHCC
>Mature Secondary Structure
MKSIKKAFLLIIGSISLGLGVLGIILPLLPTTPLLLLSAACYIRSSDKLYQWLITNKYVG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
SYILNYRSGKGIPLKAKIIGVSLLWISILYTIIFVVPLVIVKILLFLIASYFTWFILKQK
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFREIGN
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]