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The map label for this gene is yedE [H]

Identifier: 23100599

GI number: 23100599

Start: 3275529

End: 3276776

Strand: Reverse

Name: yedE [H]

Synonym: OB3144

Alternate gene names: 23100599

Gene position: 3276776-3275529 (Counterclockwise)

Preceding gene: 23100600

Following gene: 23100597

Centisome position: 90.26

GC content: 40.14

Gene sequence:

>1248_bases
ATGGAGCAATCCGTAACTCAGAAAAACTTTATGCAAAAACAGACAACAATTTTGGCGGACTTAAATCCTATGCAAAAGCC
CCTTCTTATAATAGGGATCATTGTATCTATTATTCTATTTTCAGCAATTGTCATCACAGCTGATTGGATACAAGGTGTAT
TATTTATATTAGGATTAGCGCTAGGAGCGACATTGCTTTATGCTCGTTTTGGTTTTACTTCTGCCTTTAGAAGACTAGCA
TCTGTTGGTAATGTTCAAGGTATTCAAGCGCATCTTCTTATGTTTGTTGTTTCAACAACTTTATTTGCAATTATTTTAAG
TAATGGTTTTAGTTTTACAGGGGTAGAACCGCAAGGATATGTTTCACCTGTAGGGATTAGTGTACTTGTTGGAGCATTTT
TATTCGGTATTGGAATGCAATTGGGTAATGGATGTGCATCAGGGACATTGTATAACCTTGGTGGTGGAGGATCATCCATG
ATTTTCACATTAATTGCTTTTATTATTGGTTCAACCCTCGGTGCATATCATTTACCTTTTTGGACAGAGACTCCATCCTT
ACCGCCGATTTCACTTGCTGAGTCGACTGGATTAGGATTCTTTGGGGGGTGGGTTGTTCAGCTTCTATTGTTTGGTCTTA
TTTATTGGATTACGTTAATCGTAGCGAAACGTAAAAATCCACCGGCAATGAAGCCTTTAGCAAAAGGTAGTGGTTGGAAG
CTTGTTTTCCGTGGAGCATGGCCATTATTTATTGCTGGTGTAATTTTAGCAGCACTGAATGCACTTGTACTACTCGTACG
TGGAACTCCTTGGGGGATTACTTCTGCATTTGCTTTATGGGGAGGTAAAACCTTACAAGCGGTTGGTGTAGATGTATCTT
CCTGGGGATATTTTTCAGGGGATGCAGCAAATGCACTTTCCCAATCCGTATTAATGGATTCCACAAGTGTAATGAACTTC
GGAATCATTTTAGGAGCATTTATTGCAGTAACTGCGCAGGGTAACTTTAAACCGCGCAAGATTAAACCAGGTGTAGCAGG
AGCTGCTATCGTCGGAGGATTACTAATGGGATATGGTGCGCGTCTTGCGTTTGGTTGTAATATTGGAGCATACTTCGGTG
GAATCTCTTCATTCAGTCTTCACGGCTGGGTATGGGCAATAATGGCATTACTAGGAACTGGTGTAGCATTATTCCTACGG
CCACTATTTGGTATGATGAACCCGAATAAAAATGATCAATTTTGTTAG

Upstream 100 bases:

>100_bases
TCTAAATGTGATGAAATTAGGCCAAGCAAAGCTATTTACTTTTTCAAAAAAATCATGTATCCTTAATCCTTAGTAAATTA
ATTGGAAAAGAGGGTTTTAG

Downstream 100 bases:

>100_bases
TGAATAATGGAATGAAGAACCCCGTGCAGATGCTCGGGGTTCTTCACATTGTCCGTAGAAGAACGTAAATCACCAGTGTT
ATCTACCATATGATTGGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MEQSVTQKNFMQKQTTILADLNPMQKPLLIIGIIVSIILFSAIVITADWIQGVLFILGLALGATLLYARFGFTSAFRRLA
SVGNVQGIQAHLLMFVVSTTLFAIILSNGFSFTGVEPQGYVSPVGISVLVGAFLFGIGMQLGNGCASGTLYNLGGGGSSM
IFTLIAFIIGSTLGAYHLPFWTETPSLPPISLAESTGLGFFGGWVVQLLLFGLIYWITLIVAKRKNPPAMKPLAKGSGWK
LVFRGAWPLFIAGVILAALNALVLLVRGTPWGITSAFALWGGKTLQAVGVDVSSWGYFSGDAANALSQSVLMDSTSVMNF
GIILGAFIAVTAQGNFKPRKIKPGVAGAAIVGGLLMGYGARLAFGCNIGAYFGGISSFSLHGWVWAIMALLGTGVALFLR
PLFGMMNPNKNDQFC

Sequences:

>Translated_415_residues
MEQSVTQKNFMQKQTTILADLNPMQKPLLIIGIIVSIILFSAIVITADWIQGVLFILGLALGATLLYARFGFTSAFRRLA
SVGNVQGIQAHLLMFVVSTTLFAIILSNGFSFTGVEPQGYVSPVGISVLVGAFLFGIGMQLGNGCASGTLYNLGGGGSSM
IFTLIAFIIGSTLGAYHLPFWTETPSLPPISLAESTGLGFFGGWVVQLLLFGLIYWITLIVAKRKNPPAMKPLAKGSGWK
LVFRGAWPLFIAGVILAALNALVLLVRGTPWGITSAFALWGGKTLQAVGVDVSSWGYFSGDAANALSQSVLMDSTSVMNF
GIILGAFIAVTAQGNFKPRKIKPGVAGAAIVGGLLMGYGARLAFGCNIGAYFGGISSFSLHGWVWAIMALLGTGVALFLR
PLFGMMNPNKNDQFC
>Mature_415_residues
MEQSVTQKNFMQKQTTILADLNPMQKPLLIIGIIVSIILFSAIVITADWIQGVLFILGLALGATLLYARFGFTSAFRRLA
SVGNVQGIQAHLLMFVVSTTLFAIILSNGFSFTGVEPQGYVSPVGISVLVGAFLFGIGMQLGNGCASGTLYNLGGGGSSM
IFTLIAFIIGSTLGAYHLPFWTETPSLPPISLAESTGLGFFGGWVVQLLLFGLIYWITLIVAKRKNPPAMKPLAKGSGWK
LVFRGAWPLFIAGVILAALNALVLLVRGTPWGITSAFALWGGKTLQAVGVDVSSWGYFSGDAANALSQSVLMDSTSVMNF
GIILGAFIAVTAQGNFKPRKIKPGVAGAAIVGGLLMGYGARLAFGCNIGAYFGGISSFSLHGWVWAIMALLGTGVALFLR
PLFGMMNPNKNDQFC

Specific function: Unknown

COG id: COG2391

COG function: function code R; Predicted transporter component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0394 family [H]

Homologues:

Organism=Escherichia coli, GI1788238, Length=141, Percent_Identity=39.7163120567376, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1788323, Length=365, Percent_Identity=25.2054794520548, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007272 [H]

Pfam domain/function: PF04143 DUF395 [H]

EC number: NA

Molecular weight: Translated: 43829; Mature: 43829

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQSVTQKNFMQKQTTILADLNPMQKPLLIIGIIVSIILFSAIVITADWIQGVLFILGLA
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGATLLYARFGFTSAFRRLASVGNVQGIQAHLLMFVVSTTLFAIILSNGFSFTGVEPQGY
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
VSPVGISVLVGAFLFGIGMQLGNGCASGTLYNLGGGGSSMIFTLIAFIIGSTLGAYHLPF
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCC
WTETPSLPPISLAESTGLGFFGGWVVQLLLFGLIYWITLIVAKRKNPPAMKPLAKGSGWK
CCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCE
LVFRGAWPLFIAGVILAALNALVLLVRGTPWGITSAFALWGGKTLQAVGVDVSSWGYFSG
EEEECCCHHHHHHHHHHHHHHHEEHCCCCCCCHHHHHHHHCCCEEEEECCCHHCCCCCCC
DAANALSQSVLMDSTSVMNFGIILGAFIAVTAQGNFKPRKIKPGVAGAAIVGGLLMGYGA
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
RLAFGCNIGAYFGGISSFSLHGWVWAIMALLGTGVALFLRPLFGMMNPNKNDQFC
CEEECCCHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MEQSVTQKNFMQKQTTILADLNPMQKPLLIIGIIVSIILFSAIVITADWIQGVLFILGLA
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGATLLYARFGFTSAFRRLASVGNVQGIQAHLLMFVVSTTLFAIILSNGFSFTGVEPQGY
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
VSPVGISVLVGAFLFGIGMQLGNGCASGTLYNLGGGGSSMIFTLIAFIIGSTLGAYHLPF
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCC
WTETPSLPPISLAESTGLGFFGGWVVQLLLFGLIYWITLIVAKRKNPPAMKPLAKGSGWK
CCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCE
LVFRGAWPLFIAGVILAALNALVLLVRGTPWGITSAFALWGGKTLQAVGVDVSSWGYFSG
EEEECCCHHHHHHHHHHHHHHHEEHCCCCCCCHHHHHHHHCCCEEEEECCCHHCCCCCCC
DAANALSQSVLMDSTSVMNFGIILGAFIAVTAQGNFKPRKIKPGVAGAAIVGGLLMGYGA
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
RLAFGCNIGAYFGGISSFSLHGWVWAIMALLGTGVALFLRPLFGMMNPNKNDQFC
CEEECCCHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8371104; 9097040; 9278503 [H]