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The map label for this gene is yurN [H]

Identifier: 23100577

GI number: 23100577

Start: 3253782

End: 3254660

Strand: Reverse

Name: yurN [H]

Synonym: OB3122

Alternate gene names: 23100577

Gene position: 3254660-3253782 (Counterclockwise)

Preceding gene: 23100578

Following gene: 23100576

Centisome position: 89.65

GC content: 33.45

Gene sequence:

>879_bases
ATGGATAAAGTTATGTCCAATAAATGGATCATTACACTTTATATCCTTCCTGCGCTGTTATTTATTGCAGTTCTCATAGT
TATTCCATTGTTATTGTCAGGATATTTTGGCTTAATGGATTGGGATGGCATCGGAGCGATGCAATTTATCGGTCTAGATA
ATTATATTACGGCAATGCAGGATTCGAAGTTTTGGGAAAGTACATTGCATTCATTTTTGTTGGCTATATTTTCTGCGTTA
AGTTTATTACTTTACTTAGTAGTAGCATTAATTCTTGCGTCGAAAATTAAAGGTGCAAACTTTTTAAAGAAGATATATCT
TATACCAATGTTGCTTTCATCGGTAGCTATTGCACAGTTATGGATAAAAGTCTATAACCCTAGTAATGGAATGCTAAACA
GTATTTTAACGAGTTTAGGAGTGGAAAATCCTCCAGCATGGTTAGCTGATCCAAATATAGTACTTTATGCAATTTTTATA
CCAATTATTTGGCAGTATGCAGGTTTCTATATTTTGATTTACTATGCAGCACTTAAAAATATACCAGAATCTATTATAGA
AGCCGCAAAAATTGATGGTGCAAGTCCGATTCAAATTGCAATTAGGATTAAATTCCCATTAATTATGACCGTATTCAAAG
TTACTATTGTTCTAGCTATTGTTGGGTCATTAAAATATTTTGACCTAATCTATGTAATGACTGGAGGAGGGCCGAATGGA
GCTAGTGAAGTAATGGCTTCCTATATGTATAAGCTCGCTTTTTCTAGTTATGACTTTGGTTATGGCAGTGCCATAGGCTT
CTTGCTTTTAATTATTACATTAATCGTTACTTTTATTATTCGAAAAGCGACAGAAACAAAAGACACCATTCAGTACTGA

Upstream 100 bases:

>100_bases
ATGAGGAATAAATAATAATGAAGGCTGTCTGCAGGAAATTAAATAGAATTATATGCTAGGCAGCCTTATTAATTAAATTC
AAAATTGGGGTTGAACACAT

Downstream 100 bases:

>100_bases
TCGGAGGAAATATAAATGCATCGAGTCGGTTATATTTTACTTTATATTTGTTTAGGTGTTGTCGGTGTATTTCAGATCTT
CCCAATCATTTGGCTGGTCT

Product: sugar ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MDKVMSNKWIITLYILPALLFIAVLIVIPLLLSGYFGLMDWDGIGAMQFIGLDNYITAMQDSKFWESTLHSFLLAIFSAL
SLLLYLVVALILASKIKGANFLKKIYLIPMLLSSVAIAQLWIKVYNPSNGMLNSILTSLGVENPPAWLADPNIVLYAIFI
PIIWQYAGFYILIYYAALKNIPESIIEAAKIDGASPIQIAIRIKFPLIMTVFKVTIVLAIVGSLKYFDLIYVMTGGGPNG
ASEVMASYMYKLAFSSYDFGYGSAIGFLLLIITLIVTFIIRKATETKDTIQY

Sequences:

>Translated_292_residues
MDKVMSNKWIITLYILPALLFIAVLIVIPLLLSGYFGLMDWDGIGAMQFIGLDNYITAMQDSKFWESTLHSFLLAIFSAL
SLLLYLVVALILASKIKGANFLKKIYLIPMLLSSVAIAQLWIKVYNPSNGMLNSILTSLGVENPPAWLADPNIVLYAIFI
PIIWQYAGFYILIYYAALKNIPESIIEAAKIDGASPIQIAIRIKFPLIMTVFKVTIVLAIVGSLKYFDLIYVMTGGGPNG
ASEVMASYMYKLAFSSYDFGYGSAIGFLLLIITLIVTFIIRKATETKDTIQY
>Mature_292_residues
MDKVMSNKWIITLYILPALLFIAVLIVIPLLLSGYFGLMDWDGIGAMQFIGLDNYITAMQDSKFWESTLHSFLLAIFSAL
SLLLYLVVALILASKIKGANFLKKIYLIPMLLSSVAIAQLWIKVYNPSNGMLNSILTSLGVENPPAWLADPNIVLYAIFI
PIIWQYAGFYILIYYAALKNIPESIIEAAKIDGASPIQIAIRIKFPLIMTVFKVTIVLAIVGSLKYFDLIYVMTGGGPNG
ASEVMASYMYKLAFSSYDFGYGSAIGFLLLIITLIVTFIIRKATETKDTIQY

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=291, Percent_Identity=27.8350515463918, Blast_Score=124, Evalue=6e-30,
Organism=Escherichia coli, GI1787570, Length=241, Percent_Identity=26.5560165975104, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1790465, Length=255, Percent_Identity=25.4901960784314, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1787080, Length=254, Percent_Identity=25.1968503937008, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32451; Mature: 32451

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKVMSNKWIITLYILPALLFIAVLIVIPLLLSGYFGLMDWDGIGAMQFIGLDNYITAMQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHH
DSKFWESTLHSFLLAIFSALSLLLYLVVALILASKIKGANFLKKIYLIPMLLSSVAIAQL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
WIKVYNPSNGMLNSILTSLGVENPPAWLADPNIVLYAIFIPIIWQYAGFYILIYYAALKN
HHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPESIIEAAKIDGASPIQIAIRIKFPLIMTVFKVTIVLAIVGSLKYFDLIYVMTGGGPNG
HHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCC
ASEVMASYMYKLAFSSYDFGYGSAIGFLLLIITLIVTFIIRKATETKDTIQY
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC
>Mature Secondary Structure
MDKVMSNKWIITLYILPALLFIAVLIVIPLLLSGYFGLMDWDGIGAMQFIGLDNYITAMQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHH
DSKFWESTLHSFLLAIFSALSLLLYLVVALILASKIKGANFLKKIYLIPMLLSSVAIAQL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
WIKVYNPSNGMLNSILTSLGVENPPAWLADPNIVLYAIFIPIIWQYAGFYILIYYAALKN
HHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPESIIEAAKIDGASPIQIAIRIKFPLIMTVFKVTIVLAIVGSLKYFDLIYVMTGGGPNG
HHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCC
ASEVMASYMYKLAFSSYDFGYGSAIGFLLLIITLIVTFIIRKATETKDTIQY
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]