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The map label for this gene is ycjP [C]

Identifier: 23100576

GI number: 23100576

Start: 3252945

End: 3253766

Strand: Reverse

Name: ycjP [C]

Synonym: OB3121

Alternate gene names: 23100576

Gene position: 3253766-3252945 (Counterclockwise)

Preceding gene: 23100577

Following gene: 23100574

Centisome position: 89.62

GC content: 33.7

Gene sequence:

>822_bases
ATGCATCGAGTCGGTTATATTTTACTTTATATTTGTTTAGGTGTTGTCGGTGTATTTCAGATCTTCCCAATCATTTGGCT
GGTCTCTTTCTCTTTAAAGACGAACCAGGAAATTTTTGCGGGAAATCCGTTTGCATTACCAACTGATCCTAAATGGGAAA
ATTACTTAAAAGTGTTTGAAGGTGGAATTGGAACGTATTTTTGGAATAGCATTTGGATAACAGTTGTTGCTACAATACTA
ACTATTTTAATTGCAAGTATGGCGACATTTGCAATAACGAGAATGAAATGGAAGTTATCGAGCTTTGTGTTAGGAATTAT
TATGATAGGATTAATGATTCCCATTCATTCAGCGCTAATTCCACTATACAATATGTTCCTCAATGTAAATTTAATTGATA
ATCCAGTATCGATTGTTGTTACGTATATGACGTATAATCTACCGATAACAGTGATGATTCTTTTAGGCTTTTACACAACA
TTACCAAGAGAAATAGAGGAAGCAGCTATCATTGATGGAAGCTCCATTCATCGGTTGTTTTTCAAGATTATCTTACCGTT
ATCAGCACCAATTATGTCCACCACTGTAATCATTAATATGATCTATAACTGGAATGAATTTGTATTTGTAAATACATTTA
TTAGTTCCGATAAATTTAAAACGTTAACTGTCGGTATTCAAAACTTTATAGGTCAATATATGACGGATTGGGGAGCAATT
GGAGCTACGTTGGTTATTAGTGTACTTCCAATCATAATTGCGTTCATTTTCTTTAGCGATAAAATCATGGAAGGTCTATC
TGCAAGTGCAGTAAAAGGGTAA

Upstream 100 bases:

>100_bases
AGGCTTCTTGCTTTTAATTATTACATTAATCGTTACTTTTATTATTCGAAAAGCGACAGAAACAAAAGACACCATTCAGT
ACTGATCGGAGGAAATATAA

Downstream 100 bases:

>100_bases
TCTCTTTATGATTTTTTAAAAGATTGTATTATCTCGAAACGATGTTTAATGATCCATGTTGAAATAGACGCGATTATACT
GATCCCAAAGATAAAGAAAA

Product: sugar ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MHRVGYILLYICLGVVGVFQIFPIIWLVSFSLKTNQEIFAGNPFALPTDPKWENYLKVFEGGIGTYFWNSIWITVVATIL
TILIASMATFAITRMKWKLSSFVLGIIMIGLMIPIHSALIPLYNMFLNVNLIDNPVSIVVTYMTYNLPITVMILLGFYTT
LPREIEEAAIIDGSSIHRLFFKIILPLSAPIMSTTVIINMIYNWNEFVFVNTFISSDKFKTLTVGIQNFIGQYMTDWGAI
GATLVISVLPIIIAFIFFSDKIMEGLSASAVKG

Sequences:

>Translated_273_residues
MHRVGYILLYICLGVVGVFQIFPIIWLVSFSLKTNQEIFAGNPFALPTDPKWENYLKVFEGGIGTYFWNSIWITVVATIL
TILIASMATFAITRMKWKLSSFVLGIIMIGLMIPIHSALIPLYNMFLNVNLIDNPVSIVVTYMTYNLPITVMILLGFYTT
LPREIEEAAIIDGSSIHRLFFKIILPLSAPIMSTTVIINMIYNWNEFVFVNTFISSDKFKTLTVGIQNFIGQYMTDWGAI
GATLVISVLPIIIAFIFFSDKIMEGLSASAVKG
>Mature_273_residues
MHRVGYILLYICLGVVGVFQIFPIIWLVSFSLKTNQEIFAGNPFALPTDPKWENYLKVFEGGIGTYFWNSIWITVVATIL
TILIASMATFAITRMKWKLSSFVLGIIMIGLMIPIHSALIPLYNMFLNVNLIDNPVSIVVTYMTYNLPITVMILLGFYTT
LPREIEEAAIIDGSSIHRLFFKIILPLSAPIMSTTVIINMIYNWNEFVFVNTFISSDKFKTLTVGIQNFIGQYMTDWGAI
GATLVISVLPIIIAFIFFSDKIMEGLSASAVKG

Specific function: Probably Part Of The Binding-Protein-Dependent Transport System Ycjnop. Probably Responsible For The Translocation Of The Substrate Across The Membrane. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=281, Percent_Identity=26.3345195729537, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1789860, Length=244, Percent_Identity=25.4098360655738, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1790464, Length=273, Percent_Identity=24.9084249084249, Blast_Score=89, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30667; Mature: 30667

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRVGYILLYICLGVVGVFQIFPIIWLVSFSLKTNQEIFAGNPFALPTDPKWENYLKVFE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHH
GGIGTYFWNSIWITVVATILTILIASMATFAITRMKWKLSSFVLGIIMIGLMIPIHSALI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLYNMFLNVNLIDNPVSIVVTYMTYNLPITVMILLGFYTTLPREIEEAAIIDGSSIHRLF
HHHHHHEEEEEECCCHHHEEEHHHHCCHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHH
FKIILPLSAPIMSTTVIINMIYNWNEFVFVNTFISSDKFKTLTVGIQNFIGQYMTDWGAI
HHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
GATLVISVLPIIIAFIFFSDKIMEGLSASAVKG
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC
>Mature Secondary Structure
MHRVGYILLYICLGVVGVFQIFPIIWLVSFSLKTNQEIFAGNPFALPTDPKWENYLKVFE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHH
GGIGTYFWNSIWITVVATILTILIASMATFAITRMKWKLSSFVLGIIMIGLMIPIHSALI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLYNMFLNVNLIDNPVSIVVTYMTYNLPITVMILLGFYTTLPREIEEAAIIDGSSIHRLF
HHHHHHEEEEEECCCHHHEEEHHHHCCHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHH
FKIILPLSAPIMSTTVIINMIYNWNEFVFVNTFISSDKFKTLTVGIQNFIGQYMTDWGAI
HHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
GATLVISVLPIIIAFIFFSDKIMEGLSASAVKG
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8920183 [H]