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The map label for this gene is ydfR [H]

Identifier: 23100545

GI number: 23100545

Start: 3214819

End: 3215412

Strand: Reverse

Name: ydfR [H]

Synonym: OB3090

Alternate gene names: 23100545

Gene position: 3215412-3214819 (Counterclockwise)

Preceding gene: 23100546

Following gene: 23100544

Centisome position: 88.57

GC content: 33.5

Gene sequence:

>594_bases
ATGGAATGGGATTGGATATGGAAAGCTGTTTTAATTGTTGTTGCAGGAACTTTACTTTTACGAATAGCTGGAAGAAAATC
TATCTCACAAATGACACTTGCGCAAACAGTTATAATGATTGGTATTGGGTCTTTATTAATACAGCCGATTGCAGGAAAAA
GTGTTTGGGTTACTATTGGAGTTGGGTTAATTTTAATACTAACTTTAATTGTAATGGAATTTATCCAAATAAAGAGTGAT
AAGTTAGAAAAATTTTTAACTGGAAAATCTATTGTTGTGATTGAAGATGGTTTACTAAACGAGACTAACCTACGAAAACT
CCGCCTAACTGTTGATCAATTAGAAATGAATTTACGCCAGCAAAATGTGTCAAGTATGAAGGATATTCGCTGGGCAACGT
TAGAATCAAATGGAAAAATTGGTTTTGTGCTAAAAGAAGAAGCAAAGCCAGCTACAAAGAAAGATATTGAAGAATTAAAA
CAAATGCTATTTCACTATATACCGAAAGAAAAACAAGCTGATTTTTCAGATGAATTATTTGTGGAGGTACGCCAAAAGGA
ACACAAGACCAATCCCCCAAAACATTTGCGGTAA

Upstream 100 bases:

>100_bases
TGGTTTTTATTTTTTATGTAAGTATTGCTGCTTACTTATCTTTACATTGCATAAAAAAAAGATACAGTGTCAAGCTAGTT
ACTAAAAAGAGGTGGACATT

Downstream 100 bases:

>100_bases
CACTATTTTGTACAAATCGGTTCAAATTCTACCAGTTTTATAATTAATTAACAAAAAACGAGTGCTGTGTTATATGATGG
ATGAGGTTCTGTTTTAGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MEWDWIWKAVLIVVAGTLLLRIAGRKSISQMTLAQTVIMIGIGSLLIQPIAGKSVWVTIGVGLILILTLIVMEFIQIKSD
KLEKFLTGKSIVVIEDGLLNETNLRKLRLTVDQLEMNLRQQNVSSMKDIRWATLESNGKIGFVLKEEAKPATKKDIEELK
QMLFHYIPKEKQADFSDELFVEVRQKEHKTNPPKHLR

Sequences:

>Translated_197_residues
MEWDWIWKAVLIVVAGTLLLRIAGRKSISQMTLAQTVIMIGIGSLLIQPIAGKSVWVTIGVGLILILTLIVMEFIQIKSD
KLEKFLTGKSIVVIEDGLLNETNLRKLRLTVDQLEMNLRQQNVSSMKDIRWATLESNGKIGFVLKEEAKPATKKDIEELK
QMLFHYIPKEKQADFSDELFVEVRQKEHKTNPPKHLR
>Mature_197_residues
MEWDWIWKAVLIVVAGTLLLRIAGRKSISQMTLAQTVIMIGIGSLLIQPIAGKSVWVTIGVGLILILTLIVMEFIQIKSD
KLEKFLTGKSIVVIEDGLLNETNLRKLRLTVDQLEMNLRQQNVSSMKDIRWATLESNGKIGFVLKEEAKPATKKDIEELK
QMLFHYIPKEKQADFSDELFVEVRQKEHKTNPPKHLR

Specific function: Unknown

COG id: COG2323

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0702 family [H]

Homologues:

Organism=Escherichia coli, GI1787135, Length=139, Percent_Identity=32.3741007194245, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007353
- InterPro:   IPR023090 [H]

Pfam domain/function: PF04239 DUF421 [H]

EC number: NA

Molecular weight: Translated: 22503; Mature: 22503

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEWDWIWKAVLIVVAGTLLLRIAGRKSISQMTLAQTVIMIGIGSLLIQPIAGKSVWVTIG
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHH
VGLILILTLIVMEFIQIKSDKLEKFLTGKSIVVIEDGLLNETNLRKLRLTVDQLEMNLRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
QNVSSMKDIRWATLESNGKIGFVLKEEAKPATKKDIEELKQMLFHYIPKEKQADFSDELF
HHHHHHHHHHEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHH
VEVRQKEHKTNPPKHLR
HHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MEWDWIWKAVLIVVAGTLLLRIAGRKSISQMTLAQTVIMIGIGSLLIQPIAGKSVWVTIG
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHH
VGLILILTLIVMEFIQIKSDKLEKFLTGKSIVVIEDGLLNETNLRKLRLTVDQLEMNLRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
QNVSSMKDIRWATLESNGKIGFVLKEEAKPATKKDIEELKQMLFHYIPKEKQADFSDELF
HHHHHHHHHHEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHH
VEVRQKEHKTNPPKHLR
HHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]