Click here to switch to the map view.

The map label for this gene is 23100508

Identifier: 23100508

GI number: 23100508

Start: 3169310

End: 3170251

Strand: Reverse

Name: 23100508

Synonym: OB3053

Alternate gene names: NA

Gene position: 3170251-3169310 (Counterclockwise)

Preceding gene: 23100509

Following gene: 23100506

Centisome position: 87.32

GC content: 38.96

Gene sequence:

>942_bases
ATGAAAAAGATTTTAGTTACAGGAGCCTTAGGACAAATCGGCTCCGAGTTAACAGGTATGCTCCGTCGAATTTATGGAGA
AGACAAAGTTATTGCAACAGATTTAAGAGAACCAGAAGGAGATTTTGGTCCTTTCGAAGTAGTTGATGTAACGAATGGCG
AACAATTATATGATGTCGCTAAAAAACATAAAGTAGACTCGGTAATGCATTTAGCAGCATTGCTTTCTGCTAAAGCAGAG
GCTTTCCCAAAAATGGCTTGGGATATAAATATGGGTGGATTGTTAAATGCATTAGAGACAGCGAAAGAATTAGACTTAAA
ATTTTTTACACCAAGTTCTATTGGTGCGTTTGGTCCATCTACTCCTCGTGATCAAACACCACAGGATACATTGCAACGTC
CGACGACGATGTATGGTGTGAATAAAGTATCTGGGGAACTATTATGTGATTATTATCATTCTCGTTTTGGTGTAGATACT
CGCGGTGTCCGTTTTCCGGGATTGATTTCATATGTAGCTCCTCCAGGAGGCGGAACCACTGACTATGCGGTAGAAATTTA
TTACGAGGCTATCCGTAAAGGTGCTTATGAGTCGTATATTTCAAAAGGTACGTATATGGACATGATGTATATGCCAGATG
CATTAAATGCTATTGTAAAATTAATGGAAGCTAATCCAAACAAATTGGTACATCGTAATGCATTCAATATCGCGGCGATT
TCAGCTGCACCAGAAGATTTTGCTAAAGCAATTAAAAAGCATATGCCTGATTTTAAAATGTCTTACTCCGTTGATCCTAT
CCGTCAATCAATAGCGGATAGTTGGCCAAACTCCATTTCTGCTGATGCAGCAGCGGCAGAATGGGGATTTGAAGCAAAAT
ATGATATCGATCGTATGACCACGGATATGCTAAGTAAAGTCCGTAAGAAAATCAATGTATAA

Upstream 100 bases:

>100_bases
ATACGAAAGAAATGCTTGATGATGCAATTGCCATTTACAAAAAAATTGGACAAGAAATGAAACTTATATAATGAATGCCA
AGTAAGAGGAGATTTTTACT

Downstream 100 bases:

>100_bases
TAAAATGCGCTTTTTCTAGATATCGAAATAAATATGAACTACTTTTTCGAGCCGCTTCTATTCCATCTTTAACTGGAATG
AAGCGGCTTTTTTCATAGTA

Product: UDP-glucose 4-epimerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MKKILVTGALGQIGSELTGMLRRIYGEDKVIATDLREPEGDFGPFEVVDVTNGEQLYDVAKKHKVDSVMHLAALLSAKAE
AFPKMAWDINMGGLLNALETAKELDLKFFTPSSIGAFGPSTPRDQTPQDTLQRPTTMYGVNKVSGELLCDYYHSRFGVDT
RGVRFPGLISYVAPPGGGTTDYAVEIYYEAIRKGAYESYISKGTYMDMMYMPDALNAIVKLMEANPNKLVHRNAFNIAAI
SAAPEDFAKAIKKHMPDFKMSYSVDPIRQSIADSWPNSISADAAAAEWGFEAKYDIDRMTTDMLSKVRKKINV

Sequences:

>Translated_313_residues
MKKILVTGALGQIGSELTGMLRRIYGEDKVIATDLREPEGDFGPFEVVDVTNGEQLYDVAKKHKVDSVMHLAALLSAKAE
AFPKMAWDINMGGLLNALETAKELDLKFFTPSSIGAFGPSTPRDQTPQDTLQRPTTMYGVNKVSGELLCDYYHSRFGVDT
RGVRFPGLISYVAPPGGGTTDYAVEIYYEAIRKGAYESYISKGTYMDMMYMPDALNAIVKLMEANPNKLVHRNAFNIAAI
SAAPEDFAKAIKKHMPDFKMSYSVDPIRQSIADSWPNSISADAAAAEWGFEAKYDIDRMTTDMLSKVRKKINV
>Mature_313_residues
MKKILVTGALGQIGSELTGMLRRIYGEDKVIATDLREPEGDFGPFEVVDVTNGEQLYDVAKKHKVDSVMHLAALLSAKAE
AFPKMAWDINMGGLLNALETAKELDLKFFTPSSIGAFGPSTPRDQTPQDTLQRPTTMYGVNKVSGELLCDYYHSRFGVDT
RGVRFPGLISYVAPPGGGTTDYAVEIYYEAIRKGAYESYISKGTYMDMMYMPDALNAIVKLMEANPNKLVHRNAFNIAAI
SAAPEDFAKAIKKHMPDFKMSYSVDPIRQSIADSWPNSISADAAAAEWGFEAKYDIDRMTTDMLSKVRKKINV

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family [H]

Homologues:

Organism=Caenorhabditis elegans, GI32566934, Length=311, Percent_Identity=40.1929260450161, Blast_Score=261, Evalue=3e-70,
Organism=Drosophila melanogaster, GI24667531, Length=315, Percent_Identity=41.9047619047619, Blast_Score=266, Evalue=1e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 34597; Mature: 34597

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILVTGALGQIGSELTGMLRRIYGEDKVIATDLREPEGDFGPFEVVDVTNGEQLYDVA
CCEEEEECCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEECCCCHHHHHHH
KKHKVDSVMHLAALLSAKAEAFPKMAWDINMGGLLNALETAKELDLKFFTPSSIGAFGPS
HHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHCCEEEECCCCCCCCCCC
TPRDQTPQDTLQRPTTMYGVNKVSGELLCDYYHSRFGVDTRGVRFPGLISYVAPPGGGTT
CCCCCCCHHHHHCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEECCCCCCCC
DYAVEIYYEAIRKGAYESYISKGTYMDMMYMPDALNAIVKLMEANPNKLVHRNAFNIAAI
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCEEECCCCCEEEE
SAAPEDFAKAIKKHMPDFKMSYSVDPIRQSIADSWPNSISADAAAAEWGFEAKYDIDRMT
CCCHHHHHHHHHHHCCCCEECCCCCHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCHHHHH
TDMLSKVRKKINV
HHHHHHHHHHCCC
>Mature Secondary Structure
MKKILVTGALGQIGSELTGMLRRIYGEDKVIATDLREPEGDFGPFEVVDVTNGEQLYDVA
CCEEEEECCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEECCCCHHHHHHH
KKHKVDSVMHLAALLSAKAEAFPKMAWDINMGGLLNALETAKELDLKFFTPSSIGAFGPS
HHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHCCEEEECCCCCCCCCCC
TPRDQTPQDTLQRPTTMYGVNKVSGELLCDYYHSRFGVDTRGVRFPGLISYVAPPGGGTT
CCCCCCCHHHHHCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEECCCCCCCC
DYAVEIYYEAIRKGAYESYISKGTYMDMMYMPDALNAIVKLMEANPNKLVHRNAFNIAAI
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCEEECCCCCEEEE
SAAPEDFAKAIKKHMPDFKMSYSVDPIRQSIADSWPNSISADAAAAEWGFEAKYDIDRMT
CCCHHHHHHHHHHHCCCCEECCCCCHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCHHHHH
TDMLSKVRKKINV
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA