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The map label for this gene is ykpA [H]

Identifier: 23100507

GI number: 23100507

Start: 3167091

End: 3168713

Strand: Direct

Name: ykpA [H]

Synonym: OB3052

Alternate gene names: 23100507

Gene position: 3167091-3168713 (Clockwise)

Preceding gene: 23100505

Following gene: 23100510

Centisome position: 87.23

GC content: 36.41

Gene sequence:

>1623_bases
ATGATTAACGTTACAAATGTTAGTTTACGATATGGAGATAAAAAACTTTTTGAAGACGTGAATTTAAAATTCACTCCAGG
CAATTGCTATGGAGTAATTGGAGCAAACGGAGCTGGTAAATCGACGTTTCTTAAGGTACTTTCCGGTGAAGTAGAGCCCC
AATCCGGTAATGTATCTATGGCACCTGGACAGAGATTGACTGTATTAAAACAGGATCATTTCGCATATGAAGAACACCCT
GTTTTAGAAACTGTGCTAATGGGACATGAGCGCCTGTATAAAGTAAAACAGGAAAAAGACGCAATTTATATGAAAGAAGA
TTTCTCTGAAGAAGACGGAATACGTGCAGCTGAACTTGAAGGTGATTTTGCTGAGATGAACGGTTGGGAAGCAGAATCCG
ATGCAGCTGTATTATTAAAAGGTCTTGGTATAGATGAATCCATTCACGATAAATTGATGTCAGATATTCCTGAAGACCAA
AAAGTAAAGGTCTTACTCGCACAAGCATTATTCGGTAATCCAGATATCTTACTATTGGATGAGCCGACAAACGGTTTGGA
TATTCAAGCCATTCAGTGGTTAGAAGAATTCCTTATTAACTTTGAGAATACAGTTATTGTAGTATCTCATGACCGACACT
TTTTAAACAAAGTATGTACGCATATCGCGGATGTGGACTATGGAAAGATACAAATTTATGTTGGGAACTATGATTTCTGG
TATGAATCTAGCCAACTCGCATCAAGAATGGCACAAGAAGCGAATAAGAAAAAAGAAGAAAAGATGAATGAACTTAAAGA
ATTTATTGCAAGATTTAGTGCAAATGCTTCTAAATCAAAACAAGCAACTTCTCGTAAAAAAATGTTAGATAATATTACAC
TAGAAGATATCAAACCATCTTCACGTAAATACCCATATATTGCATTTACACCAGAAAGAGAAATTGGAAATGACTTGTTA
CAGGTACAAGGCTTGACCAAATCCATTAACGGTGTAAAAGTTCTAGACAATATCAACTTTACGTTAAACCCGAATGATAA
AGTAGCGCTAATTGGTAAGAATGATATTGCGAATACGACGCTACTCCAGATTCTTGCTGGTGAATTAGAACCAGATGAAG
GTTCATTTAAATGGGGTATTACAACTTCCCAATCCTACTTTCCGAAAGATAACTCGGAGTACTTTGAAGGAAGCGACTTA
CCTCTAGTTGATTGGTTACGTCAGTACTCTCCAGAGGATGAAACAGAAACGTTCCTACGTGGGTTCTTAGGACGTATGCT
ATTCTCTGGTGAAGAAGCGAAGAAAAAAGCCAATGTACTATCAGGTGGAGAAAAAGTCCGTTGCATGCTATCTAAAATGA
TGCTTTCACATGCAAATGTGCTATTGCTTGATGAGCCTACGAACCATTTAGATTTAGAGTCCATTCAATCATTAAATAAT
GGATTAATCCGTTTTAAAGGTTCCATCATTTTCACGTCACATGACCATGAATTCATTAATAGTATCGCAAATCGATTAAT
TGAAATTACTCCATCAGGCATTATCGATAAAGAGATTTCTTATGATGAATATGCTCGTGATAAAGAACTACAAGACCGTA
TCCAAAAAATGTATGCATCATAA

Upstream 100 bases:

>100_bases
AATGCATACACATTTCAACTATTTCTCAAGCCCCATCTTGCATTGTGGCTATAAATGACGTAAGCTGAATTTGATACTTT
TTTTCTGGAGGCAATTAATA

Downstream 100 bases:

>100_bases
AAAGCTGTCTTGAAATAGAGTTACCGATAATAATAAACACCTTCGATCTTGTACGTAACGCTAGTACTATTTCGAAGGTG
TTTTTTGCATTGAATTGAAG

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 540; Mature: 540

Protein sequence:

>540_residues
MINVTNVSLRYGDKKLFEDVNLKFTPGNCYGVIGANGAGKSTFLKVLSGEVEPQSGNVSMAPGQRLTVLKQDHFAYEEHP
VLETVLMGHERLYKVKQEKDAIYMKEDFSEEDGIRAAELEGDFAEMNGWEAESDAAVLLKGLGIDESIHDKLMSDIPEDQ
KVKVLLAQALFGNPDILLLDEPTNGLDIQAIQWLEEFLINFENTVIVVSHDRHFLNKVCTHIADVDYGKIQIYVGNYDFW
YESSQLASRMAQEANKKKEEKMNELKEFIARFSANASKSKQATSRKKMLDNITLEDIKPSSRKYPYIAFTPEREIGNDLL
QVQGLTKSINGVKVLDNINFTLNPNDKVALIGKNDIANTTLLQILAGELEPDEGSFKWGITTSQSYFPKDNSEYFEGSDL
PLVDWLRQYSPEDETETFLRGFLGRMLFSGEEAKKKANVLSGGEKVRCMLSKMMLSHANVLLLDEPTNHLDLESIQSLNN
GLIRFKGSIIFTSHDHEFINSIANRLIEITPSGIIDKEISYDEYARDKELQDRIQKMYAS

Sequences:

>Translated_540_residues
MINVTNVSLRYGDKKLFEDVNLKFTPGNCYGVIGANGAGKSTFLKVLSGEVEPQSGNVSMAPGQRLTVLKQDHFAYEEHP
VLETVLMGHERLYKVKQEKDAIYMKEDFSEEDGIRAAELEGDFAEMNGWEAESDAAVLLKGLGIDESIHDKLMSDIPEDQ
KVKVLLAQALFGNPDILLLDEPTNGLDIQAIQWLEEFLINFENTVIVVSHDRHFLNKVCTHIADVDYGKIQIYVGNYDFW
YESSQLASRMAQEANKKKEEKMNELKEFIARFSANASKSKQATSRKKMLDNITLEDIKPSSRKYPYIAFTPEREIGNDLL
QVQGLTKSINGVKVLDNINFTLNPNDKVALIGKNDIANTTLLQILAGELEPDEGSFKWGITTSQSYFPKDNSEYFEGSDL
PLVDWLRQYSPEDETETFLRGFLGRMLFSGEEAKKKANVLSGGEKVRCMLSKMMLSHANVLLLDEPTNHLDLESIQSLNN
GLIRFKGSIIFTSHDHEFINSIANRLIEITPSGIIDKEISYDEYARDKELQDRIQKMYAS
>Mature_540_residues
MINVTNVSLRYGDKKLFEDVNLKFTPGNCYGVIGANGAGKSTFLKVLSGEVEPQSGNVSMAPGQRLTVLKQDHFAYEEHP
VLETVLMGHERLYKVKQEKDAIYMKEDFSEEDGIRAAELEGDFAEMNGWEAESDAAVLLKGLGIDESIHDKLMSDIPEDQ
KVKVLLAQALFGNPDILLLDEPTNGLDIQAIQWLEEFLINFENTVIVVSHDRHFLNKVCTHIADVDYGKIQIYVGNYDFW
YESSQLASRMAQEANKKKEEKMNELKEFIARFSANASKSKQATSRKKMLDNITLEDIKPSSRKYPYIAFTPEREIGNDLL
QVQGLTKSINGVKVLDNINFTLNPNDKVALIGKNDIANTTLLQILAGELEPDEGSFKWGITTSQSYFPKDNSEYFEGSDL
PLVDWLRQYSPEDETETFLRGFLGRMLFSGEEAKKKANVLSGGEKVRCMLSKMMLSHANVLLLDEPTNHLDLESIQSLNN
GLIRFKGSIIFTSHDHEFINSIANRLIEITPSGIIDKEISYDEYARDKELQDRIQKMYAS

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=540, Percent_Identity=29.0740740740741, Blast_Score=240, Evalue=3e-63,
Organism=Homo sapiens, GI27881506, Length=518, Percent_Identity=29.7297297297297, Blast_Score=213, Evalue=3e-55,
Organism=Homo sapiens, GI10947137, Length=518, Percent_Identity=29.7297297297297, Blast_Score=213, Evalue=4e-55,
Organism=Homo sapiens, GI10947135, Length=557, Percent_Identity=26.7504488330341, Blast_Score=179, Evalue=8e-45,
Organism=Homo sapiens, GI69354671, Length=557, Percent_Identity=26.7504488330341, Blast_Score=178, Evalue=1e-44,
Organism=Homo sapiens, GI105990541, Length=213, Percent_Identity=28.6384976525822, Blast_Score=80, Evalue=6e-15,
Organism=Homo sapiens, GI45446740, Length=242, Percent_Identity=26.0330578512397, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI47078218, Length=242, Percent_Identity=26.0330578512397, Blast_Score=71, Evalue=3e-12,
Organism=Escherichia coli, GI1787041, Length=531, Percent_Identity=48.0225988700565, Blast_Score=537, Evalue=1e-154,
Organism=Escherichia coli, GI1789751, Length=509, Percent_Identity=33.2023575638507, Blast_Score=283, Evalue=2e-77,
Organism=Escherichia coli, GI2367384, Length=530, Percent_Identity=29.0566037735849, Blast_Score=224, Evalue=8e-60,
Organism=Escherichia coli, GI1787182, Length=536, Percent_Identity=27.7985074626866, Blast_Score=202, Evalue=4e-53,
Organism=Escherichia coli, GI1788897, Length=543, Percent_Identity=21.9152854511971, Blast_Score=79, Evalue=9e-16,
Organism=Escherichia coli, GI1786398, Length=238, Percent_Identity=26.890756302521, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1789864, Length=238, Percent_Identity=23.9495798319328, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI87081791, Length=232, Percent_Identity=27.5862068965517, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1788165, Length=188, Percent_Identity=24.468085106383, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1786563, Length=216, Percent_Identity=27.3148148148148, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI48995001, Length=219, Percent_Identity=26.9406392694064, Blast_Score=63, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17555318, Length=545, Percent_Identity=27.7064220183486, Blast_Score=210, Evalue=2e-54,
Organism=Caenorhabditis elegans, GI17553372, Length=544, Percent_Identity=29.0441176470588, Blast_Score=209, Evalue=2e-54,
Organism=Caenorhabditis elegans, GI17559834, Length=546, Percent_Identity=25.6410256410256, Blast_Score=191, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI17565938, Length=212, Percent_Identity=25.9433962264151, Blast_Score=66, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6320874, Length=514, Percent_Identity=32.1011673151751, Blast_Score=244, Evalue=3e-65,
Organism=Saccharomyces cerevisiae, GI6321121, Length=543, Percent_Identity=28.3609576427256, Blast_Score=205, Evalue=1e-53,
Organism=Saccharomyces cerevisiae, GI6325030, Length=374, Percent_Identity=25.9358288770053, Blast_Score=112, Evalue=1e-25,
Organism=Saccharomyces cerevisiae, GI6323278, Length=380, Percent_Identity=26.5789473684211, Blast_Score=103, Evalue=7e-23,
Organism=Saccharomyces cerevisiae, GI6324314, Length=373, Percent_Identity=25.7372654155496, Blast_Score=96, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24666836, Length=534, Percent_Identity=30.5243445692884, Blast_Score=239, Evalue=5e-63,
Organism=Drosophila melanogaster, GI24642252, Length=516, Percent_Identity=29.2635658914729, Blast_Score=220, Evalue=2e-57,
Organism=Drosophila melanogaster, GI18859989, Length=516, Percent_Identity=29.2635658914729, Blast_Score=220, Evalue=2e-57,
Organism=Drosophila melanogaster, GI24641342, Length=540, Percent_Identity=28.8888888888889, Blast_Score=204, Evalue=1e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 61000; Mature: 61000

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINVTNVSLRYGDKKLFEDVNLKFTPGNCYGVIGANGAGKSTFLKVLSGEVEPQSGNVSM
CEEEEEEEEECCCHHHHHCCCEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEE
APGQRLTVLKQDHFAYEEHPVLETVLMGHERLYKVKQEKDAIYMKEDFSEEDGIRAAELE
CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEECC
GDFAEMNGWEAESDAAVLLKGLGIDESIHDKLMSDIPEDQKVKVLLAQALFGNPDILLLD
CCHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEE
EPTNGLDIQAIQWLEEFLINFENTVIVVSHDRHFLNKVCTHIADVDYGKIQIYVGNYDFW
CCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCEEEE
YESSQLASRMAQEANKKKEEKMNELKEFIARFSANASKSKQATSRKKMLDNITLEDIKPS
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHCCCCC
SRKYPYIAFTPEREIGNDLLQVQGLTKSINGVKVLDNINFTLNPNDKVALIGKNDIANTT
CCCCCEEEECCCHHHCCHHHHHHHHHHCCCCEEEEECCEEEECCCCCEEEEECCCCCHHH
LLQILAGELEPDEGSFKWGITTSQSYFPKDNSEYFEGSDLPLVDWLRQYSPEDETETFLR
HHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHH
GFLGRMLFSGEEAKKKANVLSGGEKVRCMLSKMMLSHANVLLLDEPTNHLDLESIQSLNN
HHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHCC
GLIRFKGSIIFTSHDHEFINSIANRLIEITPSGIIDKEISYDEYARDKELQDRIQKMYAS
CEEEEECEEEEECCCHHHHHHHHHHHEEECCCCCCCCCCCHHHHHCCHHHHHHHHHHHCC
>Mature Secondary Structure
MINVTNVSLRYGDKKLFEDVNLKFTPGNCYGVIGANGAGKSTFLKVLSGEVEPQSGNVSM
CEEEEEEEEECCCHHHHHCCCEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEE
APGQRLTVLKQDHFAYEEHPVLETVLMGHERLYKVKQEKDAIYMKEDFSEEDGIRAAELE
CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEECC
GDFAEMNGWEAESDAAVLLKGLGIDESIHDKLMSDIPEDQKVKVLLAQALFGNPDILLLD
CCHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEE
EPTNGLDIQAIQWLEEFLINFENTVIVVSHDRHFLNKVCTHIADVDYGKIQIYVGNYDFW
CCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCEEEE
YESSQLASRMAQEANKKKEEKMNELKEFIARFSANASKSKQATSRKKMLDNITLEDIKPS
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHCCCCC
SRKYPYIAFTPEREIGNDLLQVQGLTKSINGVKVLDNINFTLNPNDKVALIGKNDIANTT
CCCCCEEEECCCHHHCCHHHHHHHHHHCCCCEEEEECCEEEECCCCCEEEEECCCCCHHH
LLQILAGELEPDEGSFKWGITTSQSYFPKDNSEYFEGSDLPLVDWLRQYSPEDETETFLR
HHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHH
GFLGRMLFSGEEAKKKANVLSGGEKVRCMLSKMMLSHANVLLLDEPTNHLDLESIQSLNN
HHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHCC
GLIRFKGSIIFTSHDHEFINSIANRLIEITPSGIIDKEISYDEYARDKELQDRIQKMYAS
CEEEEECEEEEECCCHHHHHHHHHHHEEECCCCCCCCCCCHHHHHCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]