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The map label for this gene is ykoV [H]

Identifier: 23100488

GI number: 23100488

Start: 3143037

End: 3143879

Strand: Reverse

Name: ykoV [H]

Synonym: OB3033

Alternate gene names: 23100488

Gene position: 3143879-3143037 (Counterclockwise)

Preceding gene: 23100490

Following gene: 23100487

Centisome position: 86.6

GC content: 34.99

Gene sequence:

>843_bases
ATGCATACAATGTGGAAAGGAACCATCAGTTTTGGTTTGGTCAACATACCAGTGAAAATGCATGCAGCAACCGAAAACAA
AGATATACGACTTCGCCAACTACACAAGAAGTGTAAAACTCCAATTAAATATGAAAAGGTTTGTCCAAACTGTGAAGAGG
ATGTATCGAATGACGATATTGTTAAAGCGTATGAATATGCAAAAAATAAATTTGTAGTGTTGGACGATGAAGAATTAGAA
GCACTGAAGAAAGAACAGGAGGATAAAGCAGTAGAAATAATTGATTTCGTTCAGTTAAAGGATATTGATCCCATATACTT
TGAAAAAAGCTATTATTTGTCTCCAAACGAAGGGGGATCAAAGGCATATGCTTTATTGAGAGAAGCTTTATTAGATTCTG
GTAAGATTGGAATAGCGAAAATGATGATACGTTCTAAAGAACAATTAGCTGTCATTCGTGTTTATGAAAGTGCAATAGTT
GTAGAAACCATTCATTATCCAGATGAAGTTCGAGCTGTGTCAGATGTGCCCAATGTTCCTGAGCAAGCAGATGTAGGAAA
AAAAGAACTGGACACAGCAAAATTATTAATTGATCAATTGACAACAGAGTTTGAACCTGAGAAATATCAAGATAATTATC
GAACAGCTCTATTAGAATTAATAGAAGCGAAGAAAAATAATGAAGAAATAGAAGTTGGTGGAGAACCAAAATCAACTCCA
GATAATGTAACCAATCTGATGGATGCATTGCAGGAATCATTGGATCGAGCAAAGAAAGACAAGCCAAAACCAAAACAACC
GAAGAAAAAAACAGCTACAAGGAAGAAAAAAGCAACGTCATAA

Upstream 100 bases:

>100_bases
TAACCACCTCTATCATAGGTTGTCTGATTTTATTATTTTTACTATTCCGTTCGTATAAAAAACCAAGCGAACTGCAAAAT
AACTGTAAGGAGGGAACGGA

Downstream 100 bases:

>100_bases
AGTCTCTAGTACCATTCTAGGGGCTTTTTTACATAAATTGAAAATCCGTCTACCTTTTAAATAGGCGTTAAGGTCCTCCC
TAATAAAGTATTACTTTATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MHTMWKGTISFGLVNIPVKMHAATENKDIRLRQLHKKCKTPIKYEKVCPNCEEDVSNDDIVKAYEYAKNKFVVLDDEELE
ALKKEQEDKAVEIIDFVQLKDIDPIYFEKSYYLSPNEGGSKAYALLREALLDSGKIGIAKMMIRSKEQLAVIRVYESAIV
VETIHYPDEVRAVSDVPNVPEQADVGKKELDTAKLLIDQLTTEFEPEKYQDNYRTALLELIEAKKNNEEIEVGGEPKSTP
DNVTNLMDALQESLDRAKKDKPKPKQPKKKTATRKKKATS

Sequences:

>Translated_280_residues
MHTMWKGTISFGLVNIPVKMHAATENKDIRLRQLHKKCKTPIKYEKVCPNCEEDVSNDDIVKAYEYAKNKFVVLDDEELE
ALKKEQEDKAVEIIDFVQLKDIDPIYFEKSYYLSPNEGGSKAYALLREALLDSGKIGIAKMMIRSKEQLAVIRVYESAIV
VETIHYPDEVRAVSDVPNVPEQADVGKKELDTAKLLIDQLTTEFEPEKYQDNYRTALLELIEAKKNNEEIEVGGEPKSTP
DNVTNLMDALQESLDRAKKDKPKPKQPKKKTATRKKKATS
>Mature_280_residues
MHTMWKGTISFGLVNIPVKMHAATENKDIRLRQLHKKCKTPIKYEKVCPNCEEDVSNDDIVKAYEYAKNKFVVLDDEELE
ALKKEQEDKAVEIIDFVQLKDIDPIYFEKSYYLSPNEGGSKAYALLREALLDSGKIGIAKMMIRSKEQLAVIRVYESAIV
VETIHYPDEVRAVSDVPNVPEQADVGKKELDTAKLLIDQLTTEFEPEKYQDNYRTALLELIEAKKNNEEIEVGGEPKSTP
DNVTNLMDALQESLDRAKKDKPKPKQPKKKTATRKKKATS

Specific function: Could be involved in DNA repair during spore germination [H]

COG id: COG1273

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Spore core. Note=Expressed in the center of the spore core, presumably with the nucleoid [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ku domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006164
- InterPro:   IPR009187
- InterPro:   IPR016194 [H]

Pfam domain/function: PF02735 Ku [H]

EC number: NA

Molecular weight: Translated: 31918; Mature: 31918

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTMWKGTISFGLVNIPVKMHAATENKDIRLRQLHKKCKTPIKYEKVCPNCEEDVSNDDI
CCCCCCCHHEEEEEECCEEEEECCCCCCHHHHHHHHHHCCCCCHHHHCCCCHHHCCCCHH
VKAYEYAKNKFVVLDDEELEALKKEQEDKAVEIIDFVQLKDIDPIYFEKSYYLSPNEGGS
HHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCEEEECCCCCCH
KAYALLREALLDSGKIGIAKMMIRSKEQLAVIRVYESAIVVETIHYPDEVRAVSDVPNVP
HHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHEEEEEEECCCHHHHHHHCCCCCC
EQADVGKKELDTAKLLIDQLTTEFEPEKYQDNYRTALLELIEAKKNNEEIEVGGEPKSTP
CHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCH
DNVTNLMDALQESLDRAKKDKPKPKQPKKKTATRKKKATS
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MHTMWKGTISFGLVNIPVKMHAATENKDIRLRQLHKKCKTPIKYEKVCPNCEEDVSNDDI
CCCCCCCHHEEEEEECCEEEEECCCCCCHHHHHHHHHHCCCCCHHHHCCCCHHHCCCCHH
VKAYEYAKNKFVVLDDEELEALKKEQEDKAVEIIDFVQLKDIDPIYFEKSYYLSPNEGGS
HHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCEEEECCCCCCH
KAYALLREALLDSGKIGIAKMMIRSKEQLAVIRVYESAIVVETIHYPDEVRAVSDVPNVP
HHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHEEEEEEECCCHHHHHHHCCCCCC
EQADVGKKELDTAKLLIDQLTTEFEPEKYQDNYRTALLELIEAKKNNEEIEVGGEPKSTP
CHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCH
DNVTNLMDALQESLDRAKKDKPKPKQPKKKTATRKKKATS
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]