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The map label for this gene is ymaD [H]

Identifier: 23100490

GI number: 23100490

Start: 3145860

End: 3146303

Strand: Reverse

Name: ymaD [H]

Synonym: OB3035

Alternate gene names: 23100490

Gene position: 3146303-3145860 (Counterclockwise)

Preceding gene: 23100491

Following gene: 23100488

Centisome position: 86.66

GC content: 36.71

Gene sequence:

>444_bases
ATGGCACAGCATCATTTTTATTTAAAAGCAGAGTGGCCTGGCGGAAGAAATAGCCAGGGAACGATAGATGCAGGAAATTT
AAAAACAAAAATCTCAATTCCGACAGAAATGGATGGACCAGGAATTGGTAGCAATCCAGATGAAATGTTATTAGGGGCGG
CTGCTACTTGCTATGTGATTACACTGGCTGCAATGATTGAACGTGCAGAACTTCCTTTAAGTAAAATGTCTCTAGAATCA
GAAGGTATTGTGGATGTGACCAACGGTGTATTTACATACGAAAAAATCATTCATAAACCTTTCGTAGATTTAAAAAATGA
GGCAAGTGATAAACAATGGAATCATGTTAGAAAACTTGTAGAAAAAGCCGAAACTTCCTGTATGATTTCAAGAGCAATTC
AAGGTAATGTACAAATAGAATTGCAACCAACTTTCGGTAAATAA

Upstream 100 bases:

>100_bases
TTAATAATAGTATTAGCAGCTGGCATTTTTTGTACATAGCTTAGCTAGTTGTGTATTATTAAGATTATATTAGGTTTGAA
TATTCTAGAGGGGGATAACG

Downstream 100 bases:

>100_bases
AATCTATATTAAGCCCTGACCCGAACCGCTCTAAGCAGGAAAATAGAGTATGGTTCGGGTTTTTAATTAAAAAGGATACA
TGTTATCCACGGACTAAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MAQHHFYLKAEWPGGRNSQGTIDAGNLKTKISIPTEMDGPGIGSNPDEMLLGAAATCYVITLAAMIERAELPLSKMSLES
EGIVDVTNGVFTYEKIIHKPFVDLKNEASDKQWNHVRKLVEKAETSCMISRAIQGNVQIELQPTFGK

Sequences:

>Translated_147_residues
MAQHHFYLKAEWPGGRNSQGTIDAGNLKTKISIPTEMDGPGIGSNPDEMLLGAAATCYVITLAAMIERAELPLSKMSLES
EGIVDVTNGVFTYEKIIHKPFVDLKNEASDKQWNHVRKLVEKAETSCMISRAIQGNVQIELQPTFGK
>Mature_146_residues
AQHHFYLKAEWPGGRNSQGTIDAGNLKTKISIPTEMDGPGIGSNPDEMLLGAAATCYVITLAAMIERAELPLSKMSLESE
GIVDVTNGVFTYEKIIHKPFVDLKNEASDKQWNHVRKLVEKAETSCMISRAIQGNVQIELQPTFGK

Specific function: Unknown

COG id: COG1764

COG function: function code O; Predicted redox protein, regulator of disulfide bond formation

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the osmC/ohr family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015946
- InterPro:   IPR019905
- InterPro:   IPR003718 [H]

Pfam domain/function: PF02566 OsmC [H]

EC number: NA

Molecular weight: Translated: 16160; Mature: 16029

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQHHFYLKAEWPGGRNSQGTIDAGNLKTKISIPTEMDGPGIGSNPDEMLLGAAATCYVI
CCCCEEEEEEECCCCCCCCCCEECCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH
TLAAMIERAELPLSKMSLESEGIVDVTNGVFTYEKIIHKPFVDLKNEASDKQWNHVRKLV
HHHHHHHHHCCCHHHHCCCCCCCEECCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
EKAETSCMISRAIQGNVQIELQPTFGK
HHHHHHHHHHHHCCCCEEEEEEECCCC
>Mature Secondary Structure 
AQHHFYLKAEWPGGRNSQGTIDAGNLKTKISIPTEMDGPGIGSNPDEMLLGAAATCYVI
CCCEEEEEEECCCCCCCCCCEECCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH
TLAAMIERAELPLSKMSLESEGIVDVTNGVFTYEKIIHKPFVDLKNEASDKQWNHVRKLV
HHHHHHHHHCCCHHHHCCCCCCCEECCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
EKAETSCMISRAIQGNVQIELQPTFGK
HHHHHHHHHHHHCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]