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The map label for this gene is ywqC [H]

Identifier: 23100356

GI number: 23100356

Start: 2989172

End: 2989939

Strand: Reverse

Name: ywqC [H]

Synonym: OB2901

Alternate gene names: 23100356

Gene position: 2989939-2989172 (Counterclockwise)

Preceding gene: 23100358

Following gene: 23100355

Centisome position: 82.36

GC content: 37.76

Gene sequence:

>768_bases
ATGGAGGAGACAATTTCCCTCAAGGAAATCTTTGAGGTCATCAAGAAGCGCCTTTTATTAATTTTTACGTTTATTTTAGT
CGCGGCGCTTGCAGCAGCAATTATAAGTTATTTTGTCATGACACCAAAATATGAAAATAGTTCGCAATTTATTGTTAATC
AGAGCAATCAAGAACAGGCTAACCAGTTCACGCAGACAGATATTCGCACCAATGTTGAAATTATTAATACATATAACGTT
ATTATTAAAAGTCCAGCGATTCTTGATACGGTAGCGACTGAATTACAATTAGATTTAACTAGTAGTCAACTATCCGAGAA
AATTAGTGTGGCTAGTGAGGAAAATTCTCAAGTAGTGACAGTTACGGCTACGGACCCGGATCCTCTATTAGCAACAGATA
TAGCTAATACCACTGTTCAAGTATTCCAAGATGAAATTCCAGATATTATGAATGTAGATAATGTTTCCGTTCTTTCTCAG
GCAGAACTTGCCGAAGAACCGTCACCAGTTGCTCCTAACCCGATTCTAAATATCGCAATTGCGATGGTATTGGGTGCGAT
GGTAGGAGTAGGTATCGCATTCTTACTAGAGTACTTAGATAATACCATTAAGACAGAACAGGATATCGAGAAACAATTGA
ATATTCCAGTACTAGGTGTCATCTCACATATGGATGAAAAAGATGTCCGTAATGAACAATTTGGTCGGGCATCCTCGGTA
AATAAATCAGTAAGGAGTGGTTTTGATGGCGCGAAAAAAACTGTCTAA

Upstream 100 bases:

>100_bases
AATCGATTTAGTAGATATTGATCTTTTACTCTCGAGGCATTTAATACTTTATTCATGCTGTCATCAACATAAGATGACAC
AATATATTGGAGGTACAGAA

Downstream 100 bases:

>100_bases
TGTCAATAATAAAATGCGTCATTTAATTACAAAGATTAATCCACGATCGCCAATTTCAGAGCAATACCGAACTATCCGTA
CGAACCTGCAGTTTGCATCT

Product: capsular polysaccharide biosynthesis

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MEETISLKEIFEVIKKRLLLIFTFILVAALAAAIISYFVMTPKYENSSQFIVNQSNQEQANQFTQTDIRTNVEIINTYNV
IIKSPAILDTVATELQLDLTSSQLSEKISVASEENSQVVTVTATDPDPLLATDIANTTVQVFQDEIPDIMNVDNVSVLSQ
AELAEEPSPVAPNPILNIAIAMVLGAMVGVGIAFLLEYLDNTIKTEQDIEKQLNIPVLGVISHMDEKDVRNEQFGRASSV
NKSVRSGFDGAKKTV

Sequences:

>Translated_255_residues
MEETISLKEIFEVIKKRLLLIFTFILVAALAAAIISYFVMTPKYENSSQFIVNQSNQEQANQFTQTDIRTNVEIINTYNV
IIKSPAILDTVATELQLDLTSSQLSEKISVASEENSQVVTVTATDPDPLLATDIANTTVQVFQDEIPDIMNVDNVSVLSQ
AELAEEPSPVAPNPILNIAIAMVLGAMVGVGIAFLLEYLDNTIKTEQDIEKQLNIPVLGVISHMDEKDVRNEQFGRASSV
NKSVRSGFDGAKKTV
>Mature_255_residues
MEETISLKEIFEVIKKRLLLIFTFILVAALAAAIISYFVMTPKYENSSQFIVNQSNQEQANQFTQTDIRTNVEIINTYNV
IIKSPAILDTVATELQLDLTSSQLSEKISVASEENSQVVTVTATDPDPLLATDIANTTVQVFQDEIPDIMNVDNVSVLSQ
AELAEEPSPVAPNPILNIAIAMVLGAMVGVGIAFLLEYLDNTIKTEQDIEKQLNIPVLGVISHMDEKDVRNEQFGRASSV
NKSVRSGFDGAKKTV

Specific function: Required for YwqD kinase activity. May bring YwqD and its substrates into contact. Probably involved in the regulation of capsular polysaccharide biosynthesis [H]

COG id: COG3944

COG function: function code M; Capsular polysaccharide biosynthesis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpsC/CapA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003856 [H]

Pfam domain/function: PF02706 Wzz [H]

EC number: NA

Molecular weight: Translated: 27976; Mature: 27976

Theoretical pI: Translated: 4.08; Mature: 4.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEETISLKEIFEVIKKRLLLIFTFILVAALAAAIISYFVMTPKYENSSQFIVNQSNQEQA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHH
NQFTQTDIRTNVEIINTYNVIIKSPAILDTVATELQLDLTSSQLSEKISVASEENSQVVT
HHHHHHHHHCCEEEEEEEHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEE
VTATDPDPLLATDIANTTVQVFQDEIPDIMNVDNVSVLSQAELAEEPSPVAPNPILNIAI
EEECCCCCCHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHH
AMVLGAMVGVGIAFLLEYLDNTIKTEQDIEKQLNIPVLGVISHMDEKDVRNEQFGRASSV
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHCCHHHHHHHHCCCHHHH
NKSVRSGFDGAKKTV
HHHHHCCCCCCCCCC
>Mature Secondary Structure
MEETISLKEIFEVIKKRLLLIFTFILVAALAAAIISYFVMTPKYENSSQFIVNQSNQEQA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHH
NQFTQTDIRTNVEIINTYNVIIKSPAILDTVATELQLDLTSSQLSEKISVASEENSQVVT
HHHHHHHHHCCEEEEEEEHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEE
VTATDPDPLLATDIANTTVQVFQDEIPDIMNVDNVSVLSQAELAEEPSPVAPNPILNIAI
EEECCCCCCHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHH
AMVLGAMVGVGIAFLLEYLDNTIKTEQDIEKQLNIPVLGVISHMDEKDVRNEQFGRASSV
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHCCHHHHHHHHCCCHHHH
NKSVRSGFDGAKKTV
HHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]