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The map label for this gene is ywqD [H]

Identifier: 23100355

GI number: 23100355

Start: 2988499

End: 2989194

Strand: Reverse

Name: ywqD [H]

Synonym: OB2900

Alternate gene names: 23100355

Gene position: 2989194-2988499 (Counterclockwise)

Preceding gene: 23100356

Following gene: 23100354

Centisome position: 82.33

GC content: 38.94

Gene sequence:

>696_bases
ATGGCGCGAAAAAAACTGTCTAATGTCAATAATAAAATGCGTCATTTAATTACAAAGATTAATCCACGATCGCCAATTTC
AGAGCAATACCGAACTATCCGTACGAACCTGCAGTTTGCATCTGTTGACTCTGATTTAAGAAGTATATTACTTACTTCTG
CTGGCCCTTCCGAAGGGAAATCAATGACGACAGCGAATTTGGCGATTGTTTACGCTCAGCAAGGAAAACGTGTGTTATTA
GTAGACGCTGATTTACGTAAACCAACCATACATTACACTTTCCGCTTGGATAATCTTCGAGGACTCAGCAATATTCTTGT
AGGTGAGACTTCGTTAAGAGATGCCGTAGAATCTAGTGATGTAGAGAATTTGGATTTAATTTCTTGTGGTCCAATCCCTC
CTAACCCTTCGGAATTACTTGGTTCAAAACGTATGCAATTTTTTATTGAAGAAGCGAAGCAATCCTATGATATTGTCATT
TTTGATATGCCACCTGTACTTGCGGTGACAGACGCACAAGTAATGTCAAACTTTGTTGACGGCACGATTCTTGTCGTGAG
AAGTAAACAAACGGAAAACGATGCAGCTAATCGAGCGATGGAAGCACTACAATCCGTAAACGCAAATGTACTCGGTGCAG
TATTAAATGATCGTGATAAGAAAGATGCAAATTACTATTATTACTATGGAAGTTAA

Upstream 100 bases:

>100_bases
CCAGTACTAGGTGTCATCTCACATATGGATGAAAAAGATGTCCGTAATGAACAATTTGGTCGGGCATCCTCGGTAAATAA
ATCAGTAAGGAGTGGTTTTG

Downstream 100 bases:

>100_bases
ATAACTAAAAGAGCGCAGCGAAGTTAGGATGCGCTCTTCTTTTCGTTGTCTGGATACAATACTAATTTATACATGATGAT
AAACTTTGTCATTTATCTAA

Product: capsular polysaccharide biosynthesis

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MARKKLSNVNNKMRHLITKINPRSPISEQYRTIRTNLQFASVDSDLRSILLTSAGPSEGKSMTTANLAIVYAQQGKRVLL
VDADLRKPTIHYTFRLDNLRGLSNILVGETSLRDAVESSDVENLDLISCGPIPPNPSELLGSKRMQFFIEEAKQSYDIVI
FDMPPVLAVTDAQVMSNFVDGTILVVRSKQTENDAANRAMEALQSVNANVLGAVLNDRDKKDANYYYYYGS

Sequences:

>Translated_231_residues
MARKKLSNVNNKMRHLITKINPRSPISEQYRTIRTNLQFASVDSDLRSILLTSAGPSEGKSMTTANLAIVYAQQGKRVLL
VDADLRKPTIHYTFRLDNLRGLSNILVGETSLRDAVESSDVENLDLISCGPIPPNPSELLGSKRMQFFIEEAKQSYDIVI
FDMPPVLAVTDAQVMSNFVDGTILVVRSKQTENDAANRAMEALQSVNANVLGAVLNDRDKKDANYYYYYGS
>Mature_230_residues
ARKKLSNVNNKMRHLITKINPRSPISEQYRTIRTNLQFASVDSDLRSILLTSAGPSEGKSMTTANLAIVYAQQGKRVLLV
DADLRKPTIHYTFRLDNLRGLSNILVGETSLRDAVESSDVENLDLISCGPIPPNPSELLGSKRMQFFIEEAKQSYDIVIF
DMPPVLAVTDAQVMSNFVDGTILVVRSKQTENDAANRAMEALQSVNANVLGAVLNDRDKKDANYYYYYGS

Specific function: May be involved in the regulation of capsular polysaccharide biosynthesis. Autophosphorylates in vitro. Phosphorylates and activates in vitro two UDP-glucose dehydrogenases, YwqF and TuaD, as well as the DNA-binding proteins Ssb and SsbB [H]

COG id: COG0489

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Inner membrane (Probable) [C]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpsD/CapB family [H]

Homologues:

Organism=Escherichia coli, GI87082032, Length=220, Percent_Identity=35.9090909090909, Blast_Score=144, Evalue=4e-36,
Organism=Escherichia coli, GI1787216, Length=213, Percent_Identity=36.6197183098592, Blast_Score=141, Evalue=3e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR005702 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: =2.7.10.2 [H]

Molecular weight: Translated: 25720; Mature: 25588

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARKKLSNVNNKMRHLITKINPRSPISEQYRTIRTNLQFASVDSDLRSILLTSAGPSEGK
CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEECCHHHHHHHHCCCCCCCCC
SMTTANLAIVYAQQGKRVLLVDADLRKPTIHYTFRLDNLRGLSNILVGETSLRDAVESSD
CEEEEEEEEEEECCCCEEEEEECCCCCCEEEEEEEECCCCCHHHHHCCCHHHHHHHHHCC
VENLDLISCGPIPPNPSELLGSKRMQFFIEEAKQSYDIVIFDMPPVLAVTDAQVMSNFVD
CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECHHHHHHHCC
GTILVVRSKQTENDAANRAMEALQSVNANVLGAVLNDRDKKDANYYYYYGS
CEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEHHHCCCCCCCCCEEEEECC
>Mature Secondary Structure 
ARKKLSNVNNKMRHLITKINPRSPISEQYRTIRTNLQFASVDSDLRSILLTSAGPSEGK
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEECCHHHHHHHHCCCCCCCCC
SMTTANLAIVYAQQGKRVLLVDADLRKPTIHYTFRLDNLRGLSNILVGETSLRDAVESSD
CEEEEEEEEEEECCCCEEEEEECCCCCCEEEEEEEECCCCCHHHHHCCCHHHHHHHHHCC
VENLDLISCGPIPPNPSELLGSKRMQFFIEEAKQSYDIVIFDMPPVLAVTDAQVMSNFVD
CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECHHHHHHHCC
GTILVVRSKQTENDAANRAMEALQSVNANVLGAVLNDRDKKDANYYYYYGS
CEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEHHHCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]