| Definition | Oceanobacillus iheyensis HTE831, complete genome. |
|---|---|
| Accession | NC_004193 |
| Length | 3,630,528 |
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The map label for this gene is yvrD [H]
Identifier: 23100247
GI number: 23100247
Start: 2870573
End: 2871364
Strand: Reverse
Name: yvrD [H]
Synonym: OB2792
Alternate gene names: 23100247
Gene position: 2871364-2870573 (Counterclockwise)
Preceding gene: 23100248
Following gene: 23100244
Centisome position: 79.09
GC content: 38.13
Gene sequence:
>792_bases ATGGATTTAGGTTTACATGGAAAATCAGTAATTGTAGCGGCTTCTAGTAAAGGTTTAGGAAAGGCGACTGCAAAGCAGTT CGCTGCAGAAGGGGCCAAGGTGATTATTTCAAGTCGCAGTCAAGAAGAATTAGAGAAAGCGCAAGAAGAAATTCGTTCAG AAACAGGTAATAACAATGTCAGCTATATTGTTTGTGATATTACAAATCCAGCATCTGTGAAAGAATTAGTGGTAAAGACA ATTGAATTAAATGAAACAATAGATGTTCTTGTTAACAATGCTGGAGGTCCACCTGCTGGTAACTTTGATGACGTAAGTGA TGAGGAATGGACAAATGCATTTGAATTAAACTTACTTAGCTTTGTACGGTTAATACGTGAGGTATTGCCCTATATGCGTC GCCAGGGAAGTGGACACATTGTAAATATTGCTTCATCGTCTATTAAACAACCAATTGATAATTTAATTTTATCGAATACA TTCAGAGCGGGTATAGTTGGTTTGGCGAAGAGTTTATCACAAGAATTAGCTCCAGATAACATCTTAATTAATACAATTGG ACCAGGGAGAATTGGAACCGATCGTGTGAAACATTTAGATGAATTTGTAGCAAAGCAGCAAGACATGCGTTATGAAGATG TAAAATCGAAAGCAGAATCATCCATTCCAATTGGGCGTTATGGTAAGACTGAAGAATTCGCTAATTTGGTAGTATACCTA TGCTCGGGTGCGAATACGTATATAACGGGACAATCGTTATTAGTGGATGGCGGTATGGTGAAGGCGTTGTAG
Upstream 100 bases:
>100_bases TAATAACAGGAATAAAATTCAGTATATTTTGACGGGGATGGAACTATTGGTACAATAATATAAAAGCAATTTCCCTTTAG AGAAGGAGGAGAAAAACATT
Downstream 100 bases:
>100_bases ATTTTCATTTTCACTAGAGCAACAGTGGAATAGGATTATAATTTAGGAAAGGAAAAAAAGCGCTTAGATTGACTTTAATC TCTAAGCGCTTTTTTTAGAT
Product: 3-oxoacyl-(acyl carrier protein) reductase
Products: 3-oxoacyl-[acyl-carrier protein]; NADPH; H+
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MDLGLHGKSVIVAASSKGLGKATAKQFAAEGAKVIISSRSQEELEKAQEEIRSETGNNNVSYIVCDITNPASVKELVVKT IELNETIDVLVNNAGGPPAGNFDDVSDEEWTNAFELNLLSFVRLIREVLPYMRRQGSGHIVNIASSSIKQPIDNLILSNT FRAGIVGLAKSLSQELAPDNILINTIGPGRIGTDRVKHLDEFVAKQQDMRYEDVKSKAESSIPIGRYGKTEEFANLVVYL CSGANTYITGQSLLVDGGMVKAL
Sequences:
>Translated_263_residues MDLGLHGKSVIVAASSKGLGKATAKQFAAEGAKVIISSRSQEELEKAQEEIRSETGNNNVSYIVCDITNPASVKELVVKT IELNETIDVLVNNAGGPPAGNFDDVSDEEWTNAFELNLLSFVRLIREVLPYMRRQGSGHIVNIASSSIKQPIDNLILSNT FRAGIVGLAKSLSQELAPDNILINTIGPGRIGTDRVKHLDEFVAKQQDMRYEDVKSKAESSIPIGRYGKTEEFANLVVYL CSGANTYITGQSLLVDGGMVKAL >Mature_263_residues MDLGLHGKSVIVAASSKGLGKATAKQFAAEGAKVIISSRSQEELEKAQEEIRSETGNNNVSYIVCDITNPASVKELVVKT IELNETIDVLVNNAGGPPAGNFDDVSDEEWTNAFELNLLSFVRLIREVLPYMRRQGSGHIVNIASSSIKQPIDNLILSNT FRAGIVGLAKSLSQELAPDNILINTIGPGRIGTDRVKHLDEFVAKQQDMRYEDVKSKAESSIPIGRYGKTEEFANLVVYL CSGANTYITGQSLLVDGGMVKAL
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=255, Percent_Identity=31.7647058823529, Blast_Score=135, Evalue=4e-32, Organism=Homo sapiens, GI5031737, Length=256, Percent_Identity=30.078125, Blast_Score=120, Evalue=9e-28, Organism=Homo sapiens, GI19923817, Length=257, Percent_Identity=33.0739299610895, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI126723750, Length=258, Percent_Identity=27.906976744186, Blast_Score=113, Evalue=2e-25, Organism=Homo sapiens, GI66933014, Length=256, Percent_Identity=30.859375, Blast_Score=105, Evalue=4e-23, Organism=Homo sapiens, GI33667109, Length=191, Percent_Identity=31.9371727748691, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI126723191, Length=183, Percent_Identity=30.6010928961749, Blast_Score=95, Evalue=6e-20, Organism=Homo sapiens, GI59889578, Length=237, Percent_Identity=29.1139240506329, Blast_Score=95, Evalue=8e-20, Organism=Homo sapiens, GI40254992, Length=252, Percent_Identity=27.3809523809524, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI4503301, Length=236, Percent_Identity=30.5084745762712, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI7705925, Length=265, Percent_Identity=26.0377358490566, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI10190704, Length=263, Percent_Identity=26.2357414448669, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI225579078, Length=205, Percent_Identity=28.780487804878, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI4503817, Length=207, Percent_Identity=28.5024154589372, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI146231950, Length=91, Percent_Identity=36.2637362637363, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI31542939, Length=217, Percent_Identity=24.4239631336406, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI4504505, Length=198, Percent_Identity=32.3232323232323, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI4557649, Length=209, Percent_Identity=27.2727272727273, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI20149619, Length=194, Percent_Identity=27.319587628866, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI7657478, Length=196, Percent_Identity=29.5918367346939, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI109715829, Length=238, Percent_Identity=24.3697478991597, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI210032110, Length=170, Percent_Identity=26.4705882352941, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI15277342, Length=261, Percent_Identity=25.2873563218391, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI7705855, Length=199, Percent_Identity=27.1356783919598, Blast_Score=66, Evalue=3e-11, Organism=Escherichia coli, GI1787335, Length=260, Percent_Identity=33.8461538461538, Blast_Score=130, Evalue=1e-31, Organism=Escherichia coli, GI1788459, Length=254, Percent_Identity=34.251968503937, Blast_Score=120, Evalue=9e-29, Organism=Escherichia coli, GI1787905, Length=262, Percent_Identity=31.2977099236641, Blast_Score=118, Evalue=5e-28, Organism=Escherichia coli, GI87082100, Length=256, Percent_Identity=31.25, Blast_Score=112, Evalue=4e-26, Organism=Escherichia coli, GI1786812, Length=259, Percent_Identity=29.7297297297297, Blast_Score=111, Evalue=6e-26, Organism=Escherichia coli, GI87082160, Length=261, Percent_Identity=28.735632183908, Blast_Score=94, Evalue=8e-21, Organism=Escherichia coli, GI1790717, Length=262, Percent_Identity=28.2442748091603, Blast_Score=94, Evalue=8e-21, Organism=Escherichia coli, GI1789208, Length=257, Percent_Identity=26.0700389105058, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1787820, Length=188, Percent_Identity=30.3191489361702, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1789378, Length=257, Percent_Identity=26.0700389105058, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI2367365, Length=252, Percent_Identity=24.2063492063492, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI2367175, Length=255, Percent_Identity=28.2352941176471, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1789057, Length=252, Percent_Identity=25.3968253968254, Blast_Score=70, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17560676, Length=256, Percent_Identity=31.640625, Blast_Score=127, Evalue=4e-30, Organism=Caenorhabditis elegans, GI17562910, Length=266, Percent_Identity=32.7067669172932, Blast_Score=125, Evalue=2e-29, Organism=Caenorhabditis elegans, GI17561402, Length=256, Percent_Identity=32.8125, Blast_Score=124, Evalue=5e-29, Organism=Caenorhabditis elegans, GI17562904, Length=258, Percent_Identity=29.8449612403101, Blast_Score=111, Evalue=4e-25, Organism=Caenorhabditis elegans, GI17544670, Length=270, Percent_Identity=30.7407407407407, Blast_Score=104, Evalue=4e-23, Organism=Caenorhabditis elegans, GI17565030, Length=255, Percent_Identity=28.6274509803922, Blast_Score=104, Evalue=4e-23, Organism=Caenorhabditis elegans, GI17560150, Length=259, Percent_Identity=28.5714285714286, Blast_Score=104, Evalue=4e-23, Organism=Caenorhabditis elegans, GI17538480, Length=266, Percent_Identity=28.1954887218045, Blast_Score=104, Evalue=5e-23, Organism=Caenorhabditis elegans, GI17562990, Length=261, Percent_Identity=29.5019157088123, Blast_Score=102, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17559104, Length=258, Percent_Identity=28.6821705426357, Blast_Score=101, Evalue=4e-22, Organism=Caenorhabditis elegans, GI17560332, Length=263, Percent_Identity=28.5171102661597, Blast_Score=100, Evalue=6e-22, Organism=Caenorhabditis elegans, GI72000259, Length=261, Percent_Identity=29.8850574712644, Blast_Score=100, Evalue=6e-22, Organism=Caenorhabditis elegans, GI17538486, Length=264, Percent_Identity=28.4090909090909, Blast_Score=100, Evalue=6e-22, Organism=Caenorhabditis elegans, GI17563726, Length=261, Percent_Identity=28.735632183908, Blast_Score=99, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17551412, Length=258, Percent_Identity=28.6821705426357, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17562906, Length=265, Percent_Identity=29.0566037735849, Blast_Score=96, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17555706, Length=260, Percent_Identity=30.7692307692308, Blast_Score=95, Evalue=3e-20, Organism=Caenorhabditis elegans, GI71994600, Length=250, Percent_Identity=26.8, Blast_Score=94, Evalue=5e-20, Organism=Caenorhabditis elegans, GI17531453, Length=268, Percent_Identity=29.4776119402985, Blast_Score=94, Evalue=1e-19, Organism=Caenorhabditis elegans, GI193204405, Length=262, Percent_Identity=28.6259541984733, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI71994604, Length=249, Percent_Identity=26.5060240963855, Blast_Score=91, Evalue=5e-19, Organism=Caenorhabditis elegans, GI25147288, Length=259, Percent_Identity=27.7992277992278, Blast_Score=91, Evalue=6e-19, Organism=Caenorhabditis elegans, GI115534694, Length=255, Percent_Identity=27.843137254902, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17561272, Length=265, Percent_Identity=30.9433962264151, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI17560220, Length=263, Percent_Identity=26.9961977186312, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17562908, Length=265, Percent_Identity=28.3018867924528, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17536025, Length=263, Percent_Identity=28.8973384030418, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17508895, Length=174, Percent_Identity=32.7586206896552, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17536651, Length=263, Percent_Identity=27.3764258555133, Blast_Score=80, Evalue=9e-16, Organism=Caenorhabditis elegans, GI17508651, Length=255, Percent_Identity=25.8823529411765, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17568967, Length=200, Percent_Identity=30.5, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17564282, Length=172, Percent_Identity=26.7441860465116, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17532791, Length=144, Percent_Identity=31.9444444444444, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI212646214, Length=200, Percent_Identity=26.5, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17558006, Length=205, Percent_Identity=25.3658536585366, Blast_Score=64, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6324126, Length=258, Percent_Identity=28.2945736434109, Blast_Score=89, Evalue=9e-19, Organism=Saccharomyces cerevisiae, GI6323882, Length=256, Percent_Identity=26.953125, Blast_Score=84, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6322861, Length=202, Percent_Identity=30.1980198019802, Blast_Score=71, Evalue=2e-13, Organism=Drosophila melanogaster, GI21355319, Length=260, Percent_Identity=35, Blast_Score=142, Evalue=3e-34, Organism=Drosophila melanogaster, GI23397609, Length=256, Percent_Identity=28.90625, Blast_Score=105, Evalue=3e-23, Organism=Drosophila melanogaster, GI28571526, Length=253, Percent_Identity=28.8537549407115, Blast_Score=98, Evalue=5e-21, Organism=Drosophila melanogaster, GI24644339, Length=256, Percent_Identity=27.34375, Blast_Score=95, Evalue=4e-20, Organism=Drosophila melanogaster, GI21357041, Length=253, Percent_Identity=28.8537549407115, Blast_Score=95, Evalue=5e-20, Organism=Drosophila melanogaster, GI24639444, Length=265, Percent_Identity=27.5471698113208, Blast_Score=87, Evalue=9e-18, Organism=Drosophila melanogaster, GI24643142, Length=261, Percent_Identity=24.904214559387, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI24584748, Length=230, Percent_Identity=28.695652173913, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI161076933, Length=230, Percent_Identity=28.695652173913, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI24644337, Length=257, Percent_Identity=28.0155642023346, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI21358495, Length=191, Percent_Identity=27.7486910994764, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24584744, Length=228, Percent_Identity=26.7543859649123, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI28574402, Length=228, Percent_Identity=26.7543859649123, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24580925, Length=197, Percent_Identity=30.4568527918782, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI24647946, Length=203, Percent_Identity=29.5566502463054, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI45553409, Length=203, Percent_Identity=29.5566502463054, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI24647948, Length=203, Percent_Identity=29.5566502463054, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI24640492, Length=198, Percent_Identity=27.7777777777778, Blast_Score=71, Evalue=9e-13, Organism=Drosophila melanogaster, GI18859837, Length=191, Percent_Identity=27.2251308900524, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24640442, Length=203, Percent_Identity=30.5418719211823, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI161076371, Length=213, Percent_Identity=24.8826291079812, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24586328, Length=212, Percent_Identity=25.4716981132075, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.1.1.100
Molecular weight: Translated: 28424; Mature: 28424
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLGLHGKSVIVAASSKGLGKATAKQFAAEGAKVIISSRSQEELEKAQEEIRSETGNNNV CCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHCCCCCE SYIVCDITNPASVKELVVKTIELNETIDVLVNNAGGPPAGNFDDVSDEEWTNAFELNLLS EEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHCCHHHHHHHH FVRLIREVLPYMRRQGSGHIVNIASSSIKQPIDNLILSNTFRAGIVGLAKSLSQELAPDN HHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ILINTIGPGRIGTDRVKHLDEFVAKQQDMRYEDVKSKAESSIPIGRYGKTEEFANLVVYL EEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH CSGANTYITGQSLLVDGGMVKAL CCCCCEEEECCEEEECCCHHCCC >Mature Secondary Structure MDLGLHGKSVIVAASSKGLGKATAKQFAAEGAKVIISSRSQEELEKAQEEIRSETGNNNV CCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHCCCCCE SYIVCDITNPASVKELVVKTIELNETIDVLVNNAGGPPAGNFDDVSDEEWTNAFELNLLS EEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHCCHHHHHHHH FVRLIREVLPYMRRQGSGHIVNIASSSIKQPIDNLILSNTFRAGIVGLAKSLSQELAPDN HHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ILINTIGPGRIGTDRVKHLDEFVAKQQDMRYEDVKSKAESSIPIGRYGKTEEFANLVVYL EEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH CSGANTYITGQSLLVDGGMVKAL CCCCCEEEECCEEEECCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NADPH [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: (3R)-3-hydroxyacyl-[acyl-carrier protein]; NADP+
Specific reaction: (3R)-3-hydroxyacyl-[acyl-carrier protein] + NADP+ = 3-oxoacyl-[acyl-carrier protein] + NADPH + H+
General reaction: Redox reaction [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9639930; 9384377 [H]