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The map label for this gene is soxA [H]

Identifier: 23100233

GI number: 23100233

Start: 2854457

End: 2855827

Strand: Reverse

Name: soxA [H]

Synonym: OB2778

Alternate gene names: 23100233

Gene position: 2855827-2854457 (Counterclockwise)

Preceding gene: 23100234

Following gene: 23100232

Centisome position: 78.66

GC content: 40.99

Gene sequence:

>1371_bases
ATGCCAAAGCAAATTCATTTTAATGGATTCGTACAAAATTCACCATCCCCTCATTCAACGGGACTATGGAAACATGAAAA
AGATCGCGGAATAAATCATAATCGTTTAAATTACTGGACGGAAATTGCACAAATACTTGAACGCGGGAAATTTGACGCGT
TATTTATTGCCGATGTGTTAGGTACGTACAGTGTATATGGGAAAAATCATGATGCAGCGACAAGAGGTGCCGTACAACTA
CCTGCACACGATCCTTTACTTCCGATTACAGCGATGGCTGCAGTTACCGAGCATCTCGGTTTTGCACCAACCATATCTAC
CACTTATGCTCAACCGTATGTATTGTCACGTCAGCTCTCCACTTTAGATCATTTAACCGGAGGCAGAGTTGGGTGGAATG
TCGTAACTTCCTATTTGGAAAGTGAAGCAGTCAATATGGGTTTAACGGAAAGGTTGCCGAAAGAATTACGTTATAATCGA
GCAGATGAATTTTTGGATGTGGTCTACAAGCTTTGGGAACACAGCTGGGAAGAGGATTCGGTGACCTATGACCGTTCCAA
TGACTCTTTTGCTGACCCAGAGAAAGTTCATTTAATTAATCATAGCGGTGAGTTTTTTAATTTGCCTGGACCACACTTAG
TTGAGCCTTCACCACAACGAACGCCAGTATTATTCCAAGCTGGAGCATCTCCAAAGGGAAGAGATTTTGCGGCAAAACAT
GCAGAGGCCGTTTTCACAAAGCAGACATCAATTGAATCGTTGAAGAATTATTCTGCCGACATTCGAAAGCGTGCTCAAGC
AAATGGAAGAAATGCAGATGACGTCAAAATATTCCCGATGATGTTACCGATTGTTGGCTCAACAGAAGCAGAGGCGATTG
CGAAGTATGAAGACTTCGTGAATCATATCAGTTATGAAGGCACAGCTTCTTTACTATCAGGACATACAGGAATTGATTTT
TCAGAGTATGATCCAGATCAATATATTGAAGATATTGAAACAGAAGCAGTGCAAGGAAATCTAGATTTATATACGAAAGA
CCCGCATCGAAAATGGACGTTACGTGAAGCAATAAAAAATCATGGTCTTGGAAATGGTTGCCCGAAGTTTGTCGGTACTC
CAGAACAGATTGCTGATCAAATACAAAAGTGGGCTGTTGAAGCTGATATAGACGGTTTTAATGTCGCATTAGCAACTTCT
CCTGATACCTTCGGAGATTTTGTTGATCACGTAGTACCTATATTACAAGAACGGGGAATCTATCGAACGGAGTATGAAGG
AACTACGTTACGTGAAAATTTATTCGGTAAAGGGAAAAAACGATTGGCAGAAAATCATATAGCGAAGCAACTAGGAATTG
TTCACACGTAA

Upstream 100 bases:

>100_bases
ATAGTGTCAATGCGTTAAATGCTTACGATGATGAATAGTTTTGTAGACTTAACCTCAATTTTAGTGTAATTATCTTATTC
ATATACAAGGAGCTGAGTGT

Downstream 100 bases:

>100_bases
TATTTTAAGGAATGTCCTTGAACGGAAACAGATGATAGATTTCCGTTGACGCGGAAGCCTATCATCTAGAATTGTTCGAA
AAAAGGAGTGGAAAAGCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 456; Mature: 455

Protein sequence:

>456_residues
MPKQIHFNGFVQNSPSPHSTGLWKHEKDRGINHNRLNYWTEIAQILERGKFDALFIADVLGTYSVYGKNHDAATRGAVQL
PAHDPLLPITAMAAVTEHLGFAPTISTTYAQPYVLSRQLSTLDHLTGGRVGWNVVTSYLESEAVNMGLTERLPKELRYNR
ADEFLDVVYKLWEHSWEEDSVTYDRSNDSFADPEKVHLINHSGEFFNLPGPHLVEPSPQRTPVLFQAGASPKGRDFAAKH
AEAVFTKQTSIESLKNYSADIRKRAQANGRNADDVKIFPMMLPIVGSTEAEAIAKYEDFVNHISYEGTASLLSGHTGIDF
SEYDPDQYIEDIETEAVQGNLDLYTKDPHRKWTLREAIKNHGLGNGCPKFVGTPEQIADQIQKWAVEADIDGFNVALATS
PDTFGDFVDHVVPILQERGIYRTEYEGTTLRENLFGKGKKRLAENHIAKQLGIVHT

Sequences:

>Translated_456_residues
MPKQIHFNGFVQNSPSPHSTGLWKHEKDRGINHNRLNYWTEIAQILERGKFDALFIADVLGTYSVYGKNHDAATRGAVQL
PAHDPLLPITAMAAVTEHLGFAPTISTTYAQPYVLSRQLSTLDHLTGGRVGWNVVTSYLESEAVNMGLTERLPKELRYNR
ADEFLDVVYKLWEHSWEEDSVTYDRSNDSFADPEKVHLINHSGEFFNLPGPHLVEPSPQRTPVLFQAGASPKGRDFAAKH
AEAVFTKQTSIESLKNYSADIRKRAQANGRNADDVKIFPMMLPIVGSTEAEAIAKYEDFVNHISYEGTASLLSGHTGIDF
SEYDPDQYIEDIETEAVQGNLDLYTKDPHRKWTLREAIKNHGLGNGCPKFVGTPEQIADQIQKWAVEADIDGFNVALATS
PDTFGDFVDHVVPILQERGIYRTEYEGTTLRENLFGKGKKRLAENHIAKQLGIVHT
>Mature_455_residues
PKQIHFNGFVQNSPSPHSTGLWKHEKDRGINHNRLNYWTEIAQILERGKFDALFIADVLGTYSVYGKNHDAATRGAVQLP
AHDPLLPITAMAAVTEHLGFAPTISTTYAQPYVLSRQLSTLDHLTGGRVGWNVVTSYLESEAVNMGLTERLPKELRYNRA
DEFLDVVYKLWEHSWEEDSVTYDRSNDSFADPEKVHLINHSGEFFNLPGPHLVEPSPQRTPVLFQAGASPKGRDFAAKHA
EAVFTKQTSIESLKNYSADIRKRAQANGRNADDVKIFPMMLPIVGSTEAEAIAKYEDFVNHISYEGTASLLSGHTGIDFS
EYDPDQYIEDIETEAVQGNLDLYTKDPHRKWTLREAIKNHGLGNGCPKFVGTPEQIADQIQKWAVEADIDGFNVALATSP
DTFGDFVDHVVPILQERGIYRTEYEGTTLRENLFGKGKKRLAENHIAKQLGIVHT

Specific function: Part of a pathway to remove covalently bound sulfur from dibenzothiophene (DBT) without breaking carbon-carbon bonds. This enzyme metabolizes DBT-sulfone (DBTO2 or DBT 5,5-dioxide) to 2- hydroxybiphenyl (2-HBP) [H]

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ntaA/snaA/soxA(dszA) monooxygenase family [H]

Homologues:

Organism=Escherichia coli, GI1787247, Length=215, Percent_Identity=23.7209302325581, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048
- InterPro:   IPR016215 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 51101; Mature: 50969

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKQIHFNGFVQNSPSPHSTGLWKHEKDRGINHNRLNYWTEIAQILERGKFDALFIADVL
CCCEEEECCEECCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH
GTYSVYGKNHDAATRGAVQLPAHDPLLPITAMAAVTEHLGFAPTISTTYAQPYVLSRQLS
HHHHHCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHH
TLDHLTGGRVGWNVVTSYLESEAVNMGLTERLPKELRYNRADEFLDVVYKLWEHSWEEDS
HHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCC
VTYDRSNDSFADPEKVHLINHSGEFFNLPGPHLVEPSPQRTPVLFQAGASPKGRDFAAKH
EEEECCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHH
AEAVFTKQTSIESLKNYSADIRKRAQANGRNADDVKIFPMMLPIVGSTEAEAIAKYEDFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHCCCCHHHHHHHHHHHH
NHISYEGTASLLSGHTGIDFSEYDPDQYIEDIETEAVQGNLDLYTKDPHRKWTLREAIKN
HHCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHH
HGLGNGCPKFVGTPEQIADQIQKWAVEADIDGFNVALATSPDTFGDFVDHVVPILQERGI
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCC
YRTEYEGTTLRENLFGKGKKRLAENHIAKQLGIVHT
EEEECCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PKQIHFNGFVQNSPSPHSTGLWKHEKDRGINHNRLNYWTEIAQILERGKFDALFIADVL
CCEEEECCEECCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH
GTYSVYGKNHDAATRGAVQLPAHDPLLPITAMAAVTEHLGFAPTISTTYAQPYVLSRQLS
HHHHHCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHH
TLDHLTGGRVGWNVVTSYLESEAVNMGLTERLPKELRYNRADEFLDVVYKLWEHSWEEDS
HHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCC
VTYDRSNDSFADPEKVHLINHSGEFFNLPGPHLVEPSPQRTPVLFQAGASPKGRDFAAKH
EEEECCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHH
AEAVFTKQTSIESLKNYSADIRKRAQANGRNADDVKIFPMMLPIVGSTEAEAIAKYEDFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHCCCCHHHHHHHHHHHH
NHISYEGTASLLSGHTGIDFSEYDPDQYIEDIETEAVQGNLDLYTKDPHRKWTLREAIKN
HHCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHH
HGLGNGCPKFVGTPEQIADQIQKWAVEADIDGFNVALATSPDTFGDFVDHVVPILQERGI
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCC
YRTEYEGTTLRENLFGKGKKRLAENHIAKQLGIVHT
EEEECCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961424; 7574582 [H]