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The map label for this gene is licR [H]

Identifier: 23100219

GI number: 23100219

Start: 2834981

End: 2836927

Strand: Direct

Name: licR [H]

Synonym: OB2764

Alternate gene names: 23100219

Gene position: 2834981-2836927 (Clockwise)

Preceding gene: 23100218

Following gene: 23100225

Centisome position: 78.09

GC content: 34.46

Gene sequence:

>1947_bases
ATGGACACTAGATTACGTGTAATGTTAAAGGAATTCATTCAGGCAAAAGCCCCACTAACAAGCACTTTTATTGCGAATAT
TAACCAAGTGACTTCACGAACAACGCGAGATGATATAAAAAAATTAAACCAACACATTCAATTACATGGAGCAGTGATTC
AATCCATCAAAGGAAAAGGGTATCAATTATCTATTCAAAATGAAGATACATTTCATCGTTTTTTAACCATGGAATGGAAT
GAAGACATGGATTCCCGAAAAACCCCAAACACTCCAGAACAACGCGTCAAATATATCGTTAGACGTTTATTATTTACAAT
GGATTACATAAAACTAGAACAATTAGCAGACGAGATGTATATTAGTAAATCTACCATTCAAAATGATATGAAATTAGTAC
GGCAACAATTAAATCCTTTTGAGTTAGATATACATGTTAAACCTAGTCATGGGATTAAAATAATTGGAGAAGAAATAAAA
ATTCGATTTTGCATGGCAGAATTTTTTGTTGATCGAGAGAACCATTCACACGCAGATGTAAAAACACATTGTGAATTTGT
TACACTACCAGACCAACAAATGAGTATGATTAAAAATATAATTATCCAACAACTGGACTCACATCAAATGACCTTATCAG
ATATTGCCATCCATAATCTGTTTATTCATATTGCTATTGCCGTCTTACGTATTAGAGACGGACACCCTATCGACTTTAAT
GCAGCACACAGAGAAGAAATGCAAGATATGAAGGACACAAAAGCATATTTTGTCGCAGAAAAGATCGTAGAAGATACAGA
AAAACAATTACACTTATCTTTTCCTAAGACAGAAACAACTTATGTTGCTTTGCATCTTCTCGGTACAAAAATGGTTGGCT
CCACCAATATAGATAGTACGGATATTGAATCTATATTAGATCCTTCTATTTATAAACTCATAATGCTCTCATTGGAAAAG
ATTGAGGAGGAAATGCATCTCGGTATAAGTCAAGATACAGAGTTAATGATTAGTCTTGGGATGCATTTAAAGCCTGCAAT
GAATCGATACAAGTATGGCATGAACATACGTAACCCTATGCTTACACATATTAAGAAGAACTACCCACTTGCTTTTCAAG
CTGCTGTTTATGCAGGAGTTGTTATCGAAGAGAAAACCGATATAACAATTGATGAAAATGAAATTGGCTACCTCGCGCTA
CACATTGGTGCAGCAATGGAGAGAAACAAATTGAGAAAAGGACCAAAGCGTTGTCTCGTTGTGTGTGCATCTGGTATGGG
TACTGCACAATTAATATACTATAAATTAAAGTCAAAATTTGAAGGACAAATGGAAGTAGTGGGAACTACGGAATATTATC
GTCTACGTGATTATCCACTTGATGATATCGACCTGATTATTTCATCTATTCCCATCAAGGAAGACCTATGTATTCCTGTT
ATAGAAGTTAATGCAATTATCGAAGAAGAAGATTTACAACATATTCAATCATTTATTTCTGGTAAAAAAACAAATCTACT
ATCCCAATATTTGCATGAATCGAATATCTTTTTAAATCTTGAAGCTTCTTCTAAACAAGATGTACTGGAACATATGACAG
CACATGTAATAGAGAACGAATTCGTAGACACGGATCTGTTAGATTCCATTTACGAACGAGAAAAGATTGCTCCGACCGCA
TTTGGAAATCTAGTGGCTATTCCACATCCACTAACACCAAAATCAGATCAAACGTTCATTTCTATTGCGACGTTACGCGA
ACCTATTATATGGTCTGATAAAACGGTACAATTCATTTGTCTATTAAGCGTAAAAAGAAACAGTCAGGAAGATTTACAAT
CCTTATATGAAACCCTCGGAAAAATAATCGACCGTCCATCGATTATTCAAAAGCTAGTAAAGGCAAAAGATAAGAATGCT
TTCATCGAGATTATTGAGCAAGTTTAA

Upstream 100 bases:

>100_bases
AAATGGATTTCACGCATAGATATAGATAAAGAATAGATAGAAGGAGTTGTTTTTATGATAAAAAACAACTCCCTTCTCTA
CGTTAAGGAGGTGGATTAAA

Downstream 100 bases:

>100_bases
AGCAGACCTAGAAAAAAAAGCGAGTCTCCGTCACTTGGAGACTCACTAATACTCAATTAAAGCGTTAATTTCCCTTTCGA
TATTAAGAAGGATGAGATAC

Product: transcriptional antiterminator of lichenan operon

Products: NA

Alternate protein names: Putative phosphotransferase enzyme IIB component; Putative PTS system EIIB component; Putative phosphotransferase enzyme IIA component; Putative PTS system EIIA component [H]

Number of amino acids: Translated: 648; Mature: 648

Protein sequence:

>648_residues
MDTRLRVMLKEFIQAKAPLTSTFIANINQVTSRTTRDDIKKLNQHIQLHGAVIQSIKGKGYQLSIQNEDTFHRFLTMEWN
EDMDSRKTPNTPEQRVKYIVRRLLFTMDYIKLEQLADEMYISKSTIQNDMKLVRQQLNPFELDIHVKPSHGIKIIGEEIK
IRFCMAEFFVDRENHSHADVKTHCEFVTLPDQQMSMIKNIIIQQLDSHQMTLSDIAIHNLFIHIAIAVLRIRDGHPIDFN
AAHREEMQDMKDTKAYFVAEKIVEDTEKQLHLSFPKTETTYVALHLLGTKMVGSTNIDSTDIESILDPSIYKLIMLSLEK
IEEEMHLGISQDTELMISLGMHLKPAMNRYKYGMNIRNPMLTHIKKNYPLAFQAAVYAGVVIEEKTDITIDENEIGYLAL
HIGAAMERNKLRKGPKRCLVVCASGMGTAQLIYYKLKSKFEGQMEVVGTTEYYRLRDYPLDDIDLIISSIPIKEDLCIPV
IEVNAIIEEEDLQHIQSFISGKKTNLLSQYLHESNIFLNLEASSKQDVLEHMTAHVIENEFVDTDLLDSIYEREKIAPTA
FGNLVAIPHPLTPKSDQTFISIATLREPIIWSDKTVQFICLLSVKRNSQEDLQSLYETLGKIIDRPSIIQKLVKAKDKNA
FIEIIEQV

Sequences:

>Translated_648_residues
MDTRLRVMLKEFIQAKAPLTSTFIANINQVTSRTTRDDIKKLNQHIQLHGAVIQSIKGKGYQLSIQNEDTFHRFLTMEWN
EDMDSRKTPNTPEQRVKYIVRRLLFTMDYIKLEQLADEMYISKSTIQNDMKLVRQQLNPFELDIHVKPSHGIKIIGEEIK
IRFCMAEFFVDRENHSHADVKTHCEFVTLPDQQMSMIKNIIIQQLDSHQMTLSDIAIHNLFIHIAIAVLRIRDGHPIDFN
AAHREEMQDMKDTKAYFVAEKIVEDTEKQLHLSFPKTETTYVALHLLGTKMVGSTNIDSTDIESILDPSIYKLIMLSLEK
IEEEMHLGISQDTELMISLGMHLKPAMNRYKYGMNIRNPMLTHIKKNYPLAFQAAVYAGVVIEEKTDITIDENEIGYLAL
HIGAAMERNKLRKGPKRCLVVCASGMGTAQLIYYKLKSKFEGQMEVVGTTEYYRLRDYPLDDIDLIISSIPIKEDLCIPV
IEVNAIIEEEDLQHIQSFISGKKTNLLSQYLHESNIFLNLEASSKQDVLEHMTAHVIENEFVDTDLLDSIYEREKIAPTA
FGNLVAIPHPLTPKSDQTFISIATLREPIIWSDKTVQFICLLSVKRNSQEDLQSLYETLGKIIDRPSIIQKLVKAKDKNA
FIEIIEQV
>Mature_648_residues
MDTRLRVMLKEFIQAKAPLTSTFIANINQVTSRTTRDDIKKLNQHIQLHGAVIQSIKGKGYQLSIQNEDTFHRFLTMEWN
EDMDSRKTPNTPEQRVKYIVRRLLFTMDYIKLEQLADEMYISKSTIQNDMKLVRQQLNPFELDIHVKPSHGIKIIGEEIK
IRFCMAEFFVDRENHSHADVKTHCEFVTLPDQQMSMIKNIIIQQLDSHQMTLSDIAIHNLFIHIAIAVLRIRDGHPIDFN
AAHREEMQDMKDTKAYFVAEKIVEDTEKQLHLSFPKTETTYVALHLLGTKMVGSTNIDSTDIESILDPSIYKLIMLSLEK
IEEEMHLGISQDTELMISLGMHLKPAMNRYKYGMNIRNPMLTHIKKNYPLAFQAAVYAGVVIEEKTDITIDENEIGYLAL
HIGAAMERNKLRKGPKRCLVVCASGMGTAQLIYYKLKSKFEGQMEVVGTTEYYRLRDYPLDDIDLIISSIPIKEDLCIPV
IEVNAIIEEEDLQHIQSFISGKKTNLLSQYLHESNIFLNLEASSKQDVLEHMTAHVIENEFVDTDLLDSIYEREKIAPTA
FGNLVAIPHPLTPKSDQTFISIATLREPIIWSDKTVQFICLLSVKRNSQEDLQSLYETLGKIIDRPSIIQKLVKAKDKNA
FIEIIEQV

Specific function: Positive regulator of the licABCH operon [H]

COG id: COG3711

COG function: function code K; Transcriptional antiterminator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIB type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR007737
- InterPro:   IPR011608
- InterPro:   IPR016152
- InterPro:   IPR002178
- InterPro:   IPR013011
- InterPro:   IPR003501
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11; PF05043 Mga; PF00874 PRD; PF00359 PTS_EIIA_2; PF02302 PTS_IIB [H]

EC number: =2.7.1.69 [H]

Molecular weight: Translated: 74549; Mature: 74549

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: PS51094 PTS_EIIA_TYPE_2 ; PS51099 PTS_EIIB_TYPE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTRLRVMLKEFIQAKAPLTSTFIANINQVTSRTTRDDIKKLNQHIQLHGAVIQSIKGKG
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC
YQLSIQNEDTFHRFLTMEWNEDMDSRKTPNTPEQRVKYIVRRLLFTMDYIKLEQLADEMY
EEEEECCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISKSTIQNDMKLVRQQLNPFELDIHVKPSHGIKIIGEEIKIRFCMAEFFVDRENHSHADV
HHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEECHHEEEHHHHHHHHCCCCCCCCCH
KTHCEFVTLPDQQMSMIKNIIIQQLDSHQMTLSDIAIHNLFIHIAIAVLRIRDGHPIDFN
HHCCEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
AAHREEMQDMKDTKAYFVAEKIVEDTEKQLHLSFPKTETTYVALHLLGTKMVGSTNIDST
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHEEEEEEHHHHHCCCCCCCHH
DIESILDPSIYKLIMLSLEKIEEEMHLGISQDTELMISLGMHLKPAMNRYKYGMNIRNPM
HHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHCCCCCCCHH
LTHIKKNYPLAFQAAVYAGVVIEEKTDITIDENEIGYLALHIGAAMERNKLRKGPKRCLV
HHHHHCCCCCEEEHHHHHCEEEECCCCEEECCCCCCEEEEEHHHHHHHHHHHCCHHHEEE
VCASGMGTAQLIYYKLKSKFEGQMEVVGTTEYYRLRDYPLDDIDLIISSIPIKEDLCIPV
EEECCCCHHHHHHHHHHHCCCCCEEEEECCEEEEECCCCCCHHHHHHHCCCCCCCCEEEE
IEVNAIIEEEDLQHIQSFISGKKTNLLSQYLHESNIFLNLEASSKQDVLEHMTAHVIENE
EEEHHHHCHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHH
FVDTDLLDSIYEREKIAPTAFGNLVAIPHPLTPKSDQTFISIATLREPIIWSDKTVQFIC
CCCHHHHHHHHHHHCCCCHHCCCEEECCCCCCCCCCCCEEEEEHHCCCCEECCCCEEEEE
LLSVKRNSQEDLQSLYETLGKIIDRPSIIQKLVKAKDKNAFIEIIEQV
EEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHCC
>Mature Secondary Structure
MDTRLRVMLKEFIQAKAPLTSTFIANINQVTSRTTRDDIKKLNQHIQLHGAVIQSIKGKG
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC
YQLSIQNEDTFHRFLTMEWNEDMDSRKTPNTPEQRVKYIVRRLLFTMDYIKLEQLADEMY
EEEEECCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISKSTIQNDMKLVRQQLNPFELDIHVKPSHGIKIIGEEIKIRFCMAEFFVDRENHSHADV
HHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEECHHEEEHHHHHHHHCCCCCCCCCH
KTHCEFVTLPDQQMSMIKNIIIQQLDSHQMTLSDIAIHNLFIHIAIAVLRIRDGHPIDFN
HHCCEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
AAHREEMQDMKDTKAYFVAEKIVEDTEKQLHLSFPKTETTYVALHLLGTKMVGSTNIDST
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHEEEEEEHHHHHCCCCCCCHH
DIESILDPSIYKLIMLSLEKIEEEMHLGISQDTELMISLGMHLKPAMNRYKYGMNIRNPM
HHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHCCCCCCCHH
LTHIKKNYPLAFQAAVYAGVVIEEKTDITIDENEIGYLALHIGAAMERNKLRKGPKRCLV
HHHHHCCCCCEEEHHHHHCEEEECCCCEEECCCCCCEEEEEHHHHHHHHHHHCCHHHEEE
VCASGMGTAQLIYYKLKSKFEGQMEVVGTTEYYRLRDYPLDDIDLIISSIPIKEDLCIPV
EEECCCCHHHHHHHHHHHCCCCCEEEEECCEEEEECCCCCCHHHHHHHCCCCCCCCEEEE
IEVNAIIEEEDLQHIQSFISGKKTNLLSQYLHESNIFLNLEASSKQDVLEHMTAHVIENE
EEEHHHHCHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHH
FVDTDLLDSIYEREKIAPTAFGNLVAIPHPLTPKSDQTFISIATLREPIIWSDKTVQFIC
CCCHHHHHHHHHHHCCCCHHCCCEEECCCCCCCCCCCCEEEEEHHCCCCEECCCCEEEEE
LLSVKRNSQEDLQSLYETLGKIIDRPSIIQKLVKAKDKNAFIEIIEQV
EEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8990303; 8969509; 9384377; 10438772 [H]