Click here to switch to the map view.

The map label for this gene is ycgA [H]

Identifier: 23100167

GI number: 23100167

Start: 2781628

End: 2782566

Strand: Direct

Name: ycgA [H]

Synonym: OB2712

Alternate gene names: 23100167

Gene position: 2781628-2782566 (Clockwise)

Preceding gene: 23100166

Following gene: 23100168

Centisome position: 76.62

GC content: 36.95

Gene sequence:

>939_bases
ATGGATGCAATTGTTGGAGTATCTATTATTTATCTAGGTGCCTATTCTGGTTTTGCTATCGGATTTCTCGACCCAATGAC
AACTGGATTTGGACAACAAATTGCACAGCTTCCTTTATTTTCAGGAATTGGTTTTCGGTTAATCATATATGTGACTGTTG
TAAGTGCTACGATTTCTTACATTATCTGGTATGCAAATCGAGTTAAAAATGACCCGAATAAAAGTATTATTCGTGAAAAT
CGTTTTCCTAAATATGACGAAGGAAGTATCGATGAAGTAGATGGAACGTTAACCACTGTTCACAAAATTGTTTTGACGAT
ACTTGTACTTGGAATCGGAACATACGTCTATGGCGTGTTTCAATTAGATTGGTCCATTAATGAAATGGCAGGAGTATTTA
TTGCTATCGCCATGTTAACTGCTATTGTCTCAAAAATGGGAGCAAATCACATGGTAGAGGAATTTATGCATGGTGCTAAA
GGTGTTTTATATGGTGCACTAATCATTGGTATGGCTCGATCTATTGTCGTTGTATTAGAAAACGGCTATGTACTTGATAC
TATTGTCAATGGAATGGCAATTATAATGGAACCTTTTTCAAGTGTATTAGGAGCAATTGCTATGTTTATCGGTAATGGCC
TGTTTAACCTTATTGTTTCTTCCGGCAGTGGGCAAGCAGCCATTGTGATGCCAATTATGACTCCTCTTGCAGACTTAATG
GATGTACCAAGACAAGTAGCCGTACAAGCCTATTCAATGGGTGATGGATTCACAAATATAATTACCCCATTATCTGGGGT
ATTGATGGCTAATCTAGCAATCGCAGGCATCCCATGGACCAAATGGATTAAATTTGCTATTCCATTAGTTATTATTTGGT
ATATTATTGGCATTATTTTCTTAAGCATTGGTGTTATGATAAATTGGGGACCGATGTAG

Upstream 100 bases:

>100_bases
TCGTGGCTAGTTTGTTTTCTACCTTCGGAGCACTCGGTATTATAGTAAATGCCGTCATTGCTTTTATCCCGATTGGTAAA
TTTTAGCCAGAGCAATGAAA

Downstream 100 bases:

>100_bases
TGGTATTCAAATCAAGATTATTTTTCTAAAATGCGTTATTCTTATATAGACAAACATATCTTGGTGTGAACGTTTGCTAT
GCTTCCCTTCATCTTCTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MDAIVGVSIIYLGAYSGFAIGFLDPMTTGFGQQIAQLPLFSGIGFRLIIYVTVVSATISYIIWYANRVKNDPNKSIIREN
RFPKYDEGSIDEVDGTLTTVHKIVLTILVLGIGTYVYGVFQLDWSINEMAGVFIAIAMLTAIVSKMGANHMVEEFMHGAK
GVLYGALIIGMARSIVVVLENGYVLDTIVNGMAIIMEPFSSVLGAIAMFIGNGLFNLIVSSGSGQAAIVMPIMTPLADLM
DVPRQVAVQAYSMGDGFTNIITPLSGVLMANLAIAGIPWTKWIKFAIPLVIIWYIIGIIFLSIGVMINWGPM

Sequences:

>Translated_312_residues
MDAIVGVSIIYLGAYSGFAIGFLDPMTTGFGQQIAQLPLFSGIGFRLIIYVTVVSATISYIIWYANRVKNDPNKSIIREN
RFPKYDEGSIDEVDGTLTTVHKIVLTILVLGIGTYVYGVFQLDWSINEMAGVFIAIAMLTAIVSKMGANHMVEEFMHGAK
GVLYGALIIGMARSIVVVLENGYVLDTIVNGMAIIMEPFSSVLGAIAMFIGNGLFNLIVSSGSGQAAIVMPIMTPLADLM
DVPRQVAVQAYSMGDGFTNIITPLSGVLMANLAIAGIPWTKWIKFAIPLVIIWYIIGIIFLSIGVMINWGPM
>Mature_312_residues
MDAIVGVSIIYLGAYSGFAIGFLDPMTTGFGQQIAQLPLFSGIGFRLIIYVTVVSATISYIIWYANRVKNDPNKSIIREN
RFPKYDEGSIDEVDGTLTTVHKIVLTILVLGIGTYVYGVFQLDWSINEMAGVFIAIAMLTAIVSKMGANHMVEEFMHGAK
GVLYGALIIGMARSIVVVLENGYVLDTIVNGMAIIMEPFSSVLGAIAMFIGNGLFNLIVSSGSGQAAIVMPIMTPLADLM
DVPRQVAVQAYSMGDGFTNIITPLSGVLMANLAIAGIPWTKWIKFAIPLVIIWYIIGIIFLSIGVMINWGPM

Specific function: Unknown

COG id: COG1288

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yfcC and H.influenzae HI_0594 [H]

Homologues:

Organism=Escherichia coli, GI87082082, Length=307, Percent_Identity=31.9218241042345, Blast_Score=154, Evalue=5e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018387
- InterPro:   IPR018385 [H]

Pfam domain/function: PF03606 DcuC [H]

EC number: NA

Molecular weight: Translated: 33705; Mature: 33705

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAIVGVSIIYLGAYSGFAIGFLDPMTTGFGQQIAQLPLFSGIGFRLIIYVTVVSATISY
CCCHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
IIWYANRVKNDPNKSIIRENRFPKYDEGSIDEVDGTLTTVHKIVLTILVLGIGTYVYGVF
HHHHHHHHCCCCCHHHHHCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
QLDWSINEMAGVFIAIAMLTAIVSKMGANHMVEEFMHGAKGVLYGALIIGMARSIVVVLE
EECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEE
NGYVLDTIVNGMAIIMEPFSSVLGAIAMFIGNGLFNLIVSSGSGQAAIVMPIMTPLADLM
CCEEHHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHHHHEECCCCCEEEEHHHHHHHHHHH
DVPRQVAVQAYSMGDGFTNIITPLSGVLMANLAIAGIPWTKWIKFAIPLVIIWYIIGIIF
HCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
LSIGVMINWGPM
HHHHHHEECCCC
>Mature Secondary Structure
MDAIVGVSIIYLGAYSGFAIGFLDPMTTGFGQQIAQLPLFSGIGFRLIIYVTVVSATISY
CCCHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
IIWYANRVKNDPNKSIIRENRFPKYDEGSIDEVDGTLTTVHKIVLTILVLGIGTYVYGVF
HHHHHHHHCCCCCHHHHHCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
QLDWSINEMAGVFIAIAMLTAIVSKMGANHMVEEFMHGAKGVLYGALIIGMARSIVVVLE
EECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEE
NGYVLDTIVNGMAIIMEPFSSVLGAIAMFIGNGLFNLIVSSGSGQAAIVMPIMTPLADLM
CCEEHHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHHHHEECCCCCEEEEHHHHHHHHHHH
DVPRQVAVQAYSMGDGFTNIITPLSGVLMANLAIAGIPWTKWIKFAIPLVIIWYIIGIIF
HCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
LSIGVMINWGPM
HHHHHHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]