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The map label for this gene is ycgA [H]

Identifier: 23100166

GI number: 23100166

Start: 2781158

End: 2781613

Strand: Direct

Name: ycgA [H]

Synonym: OB2711

Alternate gene names: 23100166

Gene position: 2781158-2781613 (Clockwise)

Preceding gene: 23100149

Following gene: 23100167

Centisome position: 76.6

GC content: 36.18

Gene sequence:

>456_bases
ATGAACAATCAACAAAAGAAAAAAAGGAAGCTCAACCTACCAGATGCTTATGTGATATTATTCGCTATACTTCTTATCGC
AGCCTTACTAACGTACATAATTCCAGCCGGTTCATTTGACCGGGAAACTTCTGAAAATGGTATTGATGTAATTGTTCCTG
ATAGTTATAGCCAAATAGAACAGCAACCCACTTCTGTAATTGATATCTTTCGTTCTATTCAAGACGGCCTTATTGGAGGA
GCTGGTTTAATATTCCTCGTTTTAATTATAGGTGGTGCTTTTGCAGTTATTGAAAAGACAGGTGCTATCGACAATCTTAT
TATGAAAACAATTCGAGGAACTCAAAACAAAGAGTGGATGTTAATTATTATCGTGGCTAGTTTGTTTTCTACCTTCGGAG
CACTCGGTATTATAGTAAATGCCGTCATTGCTTTTATCCCGATTGGTAAATTTTAG

Upstream 100 bases:

>100_bases
AAGTTTTTCCAATATTTTGTATTGCTTTAAAGTATAAACTTTATTATAATTTATTTCAACTTAAAATATTTAGATTTTTT
AAATAAAAAGGAGGTTAACG

Downstream 100 bases:

>100_bases
CCAGAGCAATGAAAATGGATGCAATTGTTGGAGTATCTATTATTTATCTAGGTGCCTATTCTGGTTTTGCTATCGGATTT
CTCGACCCAATGACAACTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MNNQQKKKRKLNLPDAYVILFAILLIAALLTYIIPAGSFDRETSENGIDVIVPDSYSQIEQQPTSVIDIFRSIQDGLIGG
AGLIFLVLIIGGAFAVIEKTGAIDNLIMKTIRGTQNKEWMLIIIVASLFSTFGALGIIVNAVIAFIPIGKF

Sequences:

>Translated_151_residues
MNNQQKKKRKLNLPDAYVILFAILLIAALLTYIIPAGSFDRETSENGIDVIVPDSYSQIEQQPTSVIDIFRSIQDGLIGG
AGLIFLVLIIGGAFAVIEKTGAIDNLIMKTIRGTQNKEWMLIIIVASLFSTFGALGIIVNAVIAFIPIGKF
>Mature_151_residues
MNNQQKKKRKLNLPDAYVILFAILLIAALLTYIIPAGSFDRETSENGIDVIVPDSYSQIEQQPTSVIDIFRSIQDGLIGG
AGLIFLVLIIGGAFAVIEKTGAIDNLIMKTIRGTQNKEWMLIIIVASLFSTFGALGIIVNAVIAFIPIGKF

Specific function: Unknown

COG id: COG1288

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yfcC and H.influenzae HI_0594 [H]

Homologues:

Organism=Escherichia coli, GI87082082, Length=160, Percent_Identity=28.125, Blast_Score=68, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018387
- InterPro:   IPR018385 [H]

Pfam domain/function: PF03606 DcuC [H]

EC number: NA

Molecular weight: Translated: 16410; Mature: 16410

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNQQKKKRKLNLPDAYVILFAILLIAALLTYIIPAGSFDRETSENGIDVIVPDSYSQIE
CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHH
QQPTSVIDIFRSIQDGLIGGAGLIFLVLIIGGAFAVIEKTGAIDNLIMKTIRGTQNKEWM
HCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHH
LIIIVASLFSTFGALGIIVNAVIAFIPIGKF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNNQQKKKRKLNLPDAYVILFAILLIAALLTYIIPAGSFDRETSENGIDVIVPDSYSQIE
CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHH
QQPTSVIDIFRSIQDGLIGGAGLIFLVLIIGGAFAVIEKTGAIDNLIMKTIRGTQNKEWM
HCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHH
LIIIVASLFSTFGALGIIVNAVIAFIPIGKF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]