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The map label for this gene is ykoS [H]

Identifier: 23099870

GI number: 23099870

Start: 2469578

End: 2471269

Strand: Reverse

Name: ykoS [H]

Synonym: OB2415

Alternate gene names: 23099870

Gene position: 2471269-2469578 (Counterclockwise)

Preceding gene: 23099871

Following gene: 23099869

Centisome position: 68.07

GC content: 33.45

Gene sequence:

>1692_bases
ATGTCATACAAACAATTCAGCAATATTATTCAACATAAATGGCTGTGGCTTGGTGTATTAATTATTCTTGCGTACCTATC
ACCATATTTTATAAATGGAGAAAACACGCATCTACGAATACATGACAATATGGATTCAAACGTTGTATGGTATAAAGTTC
TAGCCGAAAGCGGAAAAATATTTACACTACAAGATGTGATGTTACCATACGCAATAGATGGATTGCCTCGCAGCGCTTTA
CCGTCACCATTTGATGCTGTCGTTTGGCTTTATGTATTATTTGAACCAATAACCGCCTATACGATAAGCCAAACAATAAT
GCGATTAGCAGCATATTTTGGGATGTATCTATTATTAACAAGATTTGTATTAGCAAAAGATACGACTCCTTGGATTACCG
TTGGTGTATCACTTGCATTTGCGATGTTACCGTATTGGCCATCAGGAGCTTTATCTATTGCCGGCATTCCATTAGCTTTA
TATGTATTTTTGACGATTCGAAAATATAAATCCGAAGCACCGAAACATGTTTGGGTATTTTTAGTGATTATTCCATTCTT
TTCGAACTTTATTTTAAGTTTTGTATTTTTCGTCGGATTAATGGGTGTTTTATGGTTAGTTGATTATATTCGACAAAAGG
AATGGAATTGGAGTTTTTTTAAAGCACTATGCTTAATGACATCAATGTATCTTGTGAAAAACTACTTATTAATAACGTCG
ATGTTTTTTGACTCTAATTTTACATCGCATCGAGAAGAACTTGATTTAGGATATAATTCGTTTGAGCGAAGTTATGAATT
AGCATGGGAGAATTTCTTATATGGACATACCCACGATGAAGCGCATCAAGCATATATTATTGTTCCAATAATTCTTTTTG
CGCTATTCTTAGCCATATTTAAGAAGGTTCAACCCAAACTTCTAATCACACTATTTCTAAGTAATTTAATACTTTCCTTC
TGGTATGCATTCTGGTATTGGGAAGGCTGGCGTTTAATAAAAGATGAGATATCCATTGTTAATACATTTAACTTTGCAAG
AATACATTTTCTAGATCCGACTATTTGGTATATTGCATTTGCGATTGCATTAGTGATTATTTGGAAATATGCAAAGTTAG
GTAAATATCTCGTTATACTCGTATTAATTGCCCAAAGTCTTTATTTGTTTGTGTTAACCGAGGATATAAAATATGGTGAA
GTTGGAACTCCAACATTTAACGAGTTTTATTCTGAGGAATTATTTACAGAAATTAAACAATATATCGGTGAGGATCCATC
TAGTTATCGTGTCGTTAGCATCGGCATGCATCCAACAATTGCACAATACAATGGATTTTACACGTTGGATACATATAACA
ATAGCTTCCCTTTAGAATATAAGCATAATTTCCGAGAAGTTATAGCTGATGAATTAGATAAAAGCCCTTCCCTAAAGAAT
TACTTCGATACATGGGGAGGTAGATTGTATATGTATGTAGCAGAACATGGAGAGAATTATATGTTTACAAAGGATAGAAA
TGAGCCTATTCAACAACTTGATATTAATACAGAAGCGTTAAAGAACTTAGGAGGAGATTATATCCTCTCAGCAGTACCGA
TTAATAACGCTGATGAAATTAATTTAGAACTTGAAAACCGATTTGAACACGAGGATTCACCATGGGAAATCTATCTTTAT
CAAGTTTCATAA

Upstream 100 bases:

>100_bases
TATGGATCCTTCTCAGGAGAAGACATGTATACAACATCTCATAGTAACAGGATTCTACGCTTACCACTTTATTACGGAAT
AACAAAAAGGGATGTCGCAT

Downstream 100 bases:

>100_bases
CGAAGTGAATTTCATAATGGCTACCTTTTTAACAGAATTTAGCTCAAACCATAAATGAACTATTTCTTGGAAATTTTTAT
TCAAGAAATAGTTCGTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 563; Mature: 562

Protein sequence:

>563_residues
MSYKQFSNIIQHKWLWLGVLIILAYLSPYFINGENTHLRIHDNMDSNVVWYKVLAESGKIFTLQDVMLPYAIDGLPRSAL
PSPFDAVVWLYVLFEPITAYTISQTIMRLAAYFGMYLLLTRFVLAKDTTPWITVGVSLAFAMLPYWPSGALSIAGIPLAL
YVFLTIRKYKSEAPKHVWVFLVIIPFFSNFILSFVFFVGLMGVLWLVDYIRQKEWNWSFFKALCLMTSMYLVKNYLLITS
MFFDSNFTSHREELDLGYNSFERSYELAWENFLYGHTHDEAHQAYIIVPIILFALFLAIFKKVQPKLLITLFLSNLILSF
WYAFWYWEGWRLIKDEISIVNTFNFARIHFLDPTIWYIAFAIALVIIWKYAKLGKYLVILVLIAQSLYLFVLTEDIKYGE
VGTPTFNEFYSEELFTEIKQYIGEDPSSYRVVSIGMHPTIAQYNGFYTLDTYNNSFPLEYKHNFREVIADELDKSPSLKN
YFDTWGGRLYMYVAEHGENYMFTKDRNEPIQQLDINTEALKNLGGDYILSAVPINNADEINLELENRFEHEDSPWEIYLY
QVS

Sequences:

>Translated_563_residues
MSYKQFSNIIQHKWLWLGVLIILAYLSPYFINGENTHLRIHDNMDSNVVWYKVLAESGKIFTLQDVMLPYAIDGLPRSAL
PSPFDAVVWLYVLFEPITAYTISQTIMRLAAYFGMYLLLTRFVLAKDTTPWITVGVSLAFAMLPYWPSGALSIAGIPLAL
YVFLTIRKYKSEAPKHVWVFLVIIPFFSNFILSFVFFVGLMGVLWLVDYIRQKEWNWSFFKALCLMTSMYLVKNYLLITS
MFFDSNFTSHREELDLGYNSFERSYELAWENFLYGHTHDEAHQAYIIVPIILFALFLAIFKKVQPKLLITLFLSNLILSF
WYAFWYWEGWRLIKDEISIVNTFNFARIHFLDPTIWYIAFAIALVIIWKYAKLGKYLVILVLIAQSLYLFVLTEDIKYGE
VGTPTFNEFYSEELFTEIKQYIGEDPSSYRVVSIGMHPTIAQYNGFYTLDTYNNSFPLEYKHNFREVIADELDKSPSLKN
YFDTWGGRLYMYVAEHGENYMFTKDRNEPIQQLDINTEALKNLGGDYILSAVPINNADEINLELENRFEHEDSPWEIYLY
QVS
>Mature_562_residues
SYKQFSNIIQHKWLWLGVLIILAYLSPYFINGENTHLRIHDNMDSNVVWYKVLAESGKIFTLQDVMLPYAIDGLPRSALP
SPFDAVVWLYVLFEPITAYTISQTIMRLAAYFGMYLLLTRFVLAKDTTPWITVGVSLAFAMLPYWPSGALSIAGIPLALY
VFLTIRKYKSEAPKHVWVFLVIIPFFSNFILSFVFFVGLMGVLWLVDYIRQKEWNWSFFKALCLMTSMYLVKNYLLITSM
FFDSNFTSHREELDLGYNSFERSYELAWENFLYGHTHDEAHQAYIIVPIILFALFLAIFKKVQPKLLITLFLSNLILSFW
YAFWYWEGWRLIKDEISIVNTFNFARIHFLDPTIWYIAFAIALVIIWKYAKLGKYLVILVLIAQSLYLFVLTEDIKYGEV
GTPTFNEFYSEELFTEIKQYIGEDPSSYRVVSIGMHPTIAQYNGFYTLDTYNNSFPLEYKHNFREVIADELDKSPSLKNY
FDTWGGRLYMYVAEHGENYMFTKDRNEPIQQLDINTEALKNLGGDYILSAVPINNADEINLELENRFEHEDSPWEIYLYQ
VS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66066; Mature: 65935

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: PS00267 TACHYKININ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYKQFSNIIQHKWLWLGVLIILAYLSPYFINGENTHLRIHDNMDSNVVWYKVLAESGKI
CCHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCEEEEECCCCCCEEEEEEECCCCCE
FTLQDVMLPYAIDGLPRSALPSPFDAVVWLYVLFEPITAYTISQTIMRLAAYFGMYLLLT
EEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RFVLAKDTTPWITVGVSLAFAMLPYWPSGALSIAGIPLALYVFLTIRKYKSEAPKHVWVF
HHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHH
LVIIPFFSNFILSFVFFVGLMGVLWLVDYIRQKEWNWSFFKALCLMTSMYLVKNYLLITS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
MFFDSNFTSHREELDLGYNSFERSYELAWENFLYGHTHDEAHQAYIIVPIILFALFLAIF
HHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHH
KKVQPKLLITLFLSNLILSFWYAFWYWEGWRLIKDEISIVNTFNFARIHFLDPTIWYIAF
HHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHEECCEEEEEEECHHHHHHHH
AIALVIIWKYAKLGKYLVILVLIAQSLYLFVLTEDIKYGEVGTPTFNEFYSEELFTEIKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH
YIGEDPSSYRVVSIGMHPTIAQYNGFYTLDTYNNSFPLEYKHNFREVIADELDKSPSLKN
HHCCCCCCEEEEEECCCCCHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCHHH
YFDTWGGRLYMYVAEHGENYMFTKDRNEPIQQLDINTEALKNLGGDYILSAVPINNADEI
HHHCCCCEEEEEEEECCCCEEEECCCCCCHHHHCCCHHHHHHCCCCEEEEEECCCCCCEE
NLELENRFEHEDSPWEIYLYQVS
EEEECCCCCCCCCCEEEEEEEEC
>Mature Secondary Structure 
SYKQFSNIIQHKWLWLGVLIILAYLSPYFINGENTHLRIHDNMDSNVVWYKVLAESGKI
CHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCEEEEECCCCCCEEEEEEECCCCCE
FTLQDVMLPYAIDGLPRSALPSPFDAVVWLYVLFEPITAYTISQTIMRLAAYFGMYLLLT
EEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RFVLAKDTTPWITVGVSLAFAMLPYWPSGALSIAGIPLALYVFLTIRKYKSEAPKHVWVF
HHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHH
LVIIPFFSNFILSFVFFVGLMGVLWLVDYIRQKEWNWSFFKALCLMTSMYLVKNYLLITS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
MFFDSNFTSHREELDLGYNSFERSYELAWENFLYGHTHDEAHQAYIIVPIILFALFLAIF
HHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHH
KKVQPKLLITLFLSNLILSFWYAFWYWEGWRLIKDEISIVNTFNFARIHFLDPTIWYIAF
HHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHEECCEEEEEEECHHHHHHHH
AIALVIIWKYAKLGKYLVILVLIAQSLYLFVLTEDIKYGEVGTPTFNEFYSEELFTEIKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH
YIGEDPSSYRVVSIGMHPTIAQYNGFYTLDTYNNSFPLEYKHNFREVIADELDKSPSLKN
HHCCCCCCEEEEEECCCCCHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCHHH
YFDTWGGRLYMYVAEHGENYMFTKDRNEPIQQLDINTEALKNLGGDYILSAVPINNADEI
HHHCCCCEEEEEEEECCCCEEEECCCCCCHHHHCCCHHHHHHCCCCEEEEEECCCCCCEE
NLELENRFEHEDSPWEIYLYQVS
EEEECCCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]