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The map label for this gene is yocB [H]

Identifier: 23099855

GI number: 23099855

Start: 2451297

End: 2452100

Strand: Reverse

Name: yocB [H]

Synonym: OB2400

Alternate gene names: 23099855

Gene position: 2452100-2451297 (Counterclockwise)

Preceding gene: 23099856

Following gene: 23099850

Centisome position: 67.54

GC content: 32.46

Gene sequence:

>804_bases
TTGGACATTCAAAAAAAGATTAAAGAACTTGAATATATGCAGACAGAAGGTAGTAACAAAATATTTACAATGTATTTAAA
TACGGATTTAAGTGATCCAGATCAGCAAGGCGGAGAATGGAAAATACATCTTAAAAATGGAATGAGAAATTTTGAGCAAT
ATCTTGAAGAAGGAGATAACAAAGAAGAATTAGAGAACTTTCGAGAAGTAAAACAGAAAGTAGAAGATTATCTAAAAGAA
TATGAAAAGAGTTTAATGAGGGGACTTATTGTATTTGCTACAGCTGATGAAACAGTTTGGTTTGCTGAACGTGTGCAAAT
GCGATTAGAAGATGAATTTTATTGGCAAGAAACCCCTGAATTAAATCAATTAAAAATTCTAGGAGAGAAATACCCACATA
CAGGCATTATTTTAGTTCAGCAAAATTATATTAAACTACTAGACACGAACTTAAATATGCTTAAGGATACTGTGGGTTAT
GAATTAGATGTAGAAGAGGAAACCTGGAGAACGATGCAAGGACCGCGTCAAGGAAATTCAACTACAGGACTTGGATCAGG
AAATTTACAAAAGGATCACTTTGAAGCAAGATACGAAGCTAACCAACAGCGTTGGTATAAAAGTATCGCAGGAAAGTTAG
ATAAACAAGCGAAAGATAGAAATTGGAAAAAAATATTTATAGTAGGGGAAGCACCTGCATCTAAAGAATTATCAAGTCAA
ATGAATAAAGAAGTTGACGATATTATTCTCAAAAATATGTTAGAACATGAAGAAAGTAAAGTAATGGAAGAGGTTTTAGC
ATAG

Upstream 100 bases:

>100_bases
TTTTTGTTTTACCTTTGATGCAGTGATTAAAAATATGTAGTTTAGTTTTTCTTTATGACGGTTACATAACTAGTACAATC
ATTTTAGGAGGTGTCCTATC

Downstream 100 bases:

>100_bases
AGATTAGAATTTAATCAGTGGCTAAATAAAAAACGACCAGCTAAAGGGATAGCTGGTCGTTTTACATTTTAATTATCAAT
AGGATCTAGAAAATCGCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MDIQKKIKELEYMQTEGSNKIFTMYLNTDLSDPDQQGGEWKIHLKNGMRNFEQYLEEGDNKEELENFREVKQKVEDYLKE
YEKSLMRGLIVFATADETVWFAERVQMRLEDEFYWQETPELNQLKILGEKYPHTGIILVQQNYIKLLDTNLNMLKDTVGY
ELDVEEETWRTMQGPRQGNSTTGLGSGNLQKDHFEARYEANQQRWYKSIAGKLDKQAKDRNWKKIFIVGEAPASKELSSQ
MNKEVDDIILKNMLEHEESKVMEEVLA

Sequences:

>Translated_267_residues
MDIQKKIKELEYMQTEGSNKIFTMYLNTDLSDPDQQGGEWKIHLKNGMRNFEQYLEEGDNKEELENFREVKQKVEDYLKE
YEKSLMRGLIVFATADETVWFAERVQMRLEDEFYWQETPELNQLKILGEKYPHTGIILVQQNYIKLLDTNLNMLKDTVGY
ELDVEEETWRTMQGPRQGNSTTGLGSGNLQKDHFEARYEANQQRWYKSIAGKLDKQAKDRNWKKIFIVGEAPASKELSSQ
MNKEVDDIILKNMLEHEESKVMEEVLA
>Mature_267_residues
MDIQKKIKELEYMQTEGSNKIFTMYLNTDLSDPDQQGGEWKIHLKNGMRNFEQYLEEGDNKEELENFREVKQKVEDYLKE
YEKSLMRGLIVFATADETVWFAERVQMRLEDEFYWQETPELNQLKILGEKYPHTGIILVQQNYIKLLDTNLNMLKDTVGY
ELDVEEETWRTMQGPRQGNSTTGLGSGNLQKDHFEARYEANQQRWYKSIAGKLDKQAKDRNWKKIFIVGEAPASKELSSQ
MNKEVDDIILKNMLEHEESKVMEEVLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019291 [H]

Pfam domain/function: PF10116 Host_attach [H]

EC number: NA

Molecular weight: Translated: 31497; Mature: 31497

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIQKKIKELEYMQTEGSNKIFTMYLNTDLSDPDQQGGEWKIHLKNGMRNFEQYLEEGDN
CCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCC
KEELENFREVKQKVEDYLKEYEKSLMRGLIVFATADETVWFAERVQMRLEDEFYWQETPE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCC
LNQLKILGEKYPHTGIILVQQNYIKLLDTNLNMLKDTVGYELDVEEETWRTMQGPRQGNS
CCHHHHHHCCCCCCCEEEEECCHHHHHHCCHHHHHHHHCCEECCCHHHHHHHCCCCCCCC
TTGLGSGNLQKDHFEARYEANQQRWYKSIAGKLDKQAKDRNWKKIFIVGEAPASKELSSQ
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHH
MNKEVDDIILKNMLEHEESKVMEEVLA
HHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MDIQKKIKELEYMQTEGSNKIFTMYLNTDLSDPDQQGGEWKIHLKNGMRNFEQYLEEGDN
CCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCC
KEELENFREVKQKVEDYLKEYEKSLMRGLIVFATADETVWFAERVQMRLEDEFYWQETPE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCC
LNQLKILGEKYPHTGIILVQQNYIKLLDTNLNMLKDTVGYELDVEEETWRTMQGPRQGNS
CCHHHHHHCCCCCCCEEEEECCHHHHHHCCHHHHHHHHCCEECCCHHHHHHHCCCCCCCC
TTGLGSGNLQKDHFEARYEANQQRWYKSIAGKLDKQAKDRNWKKIFIVGEAPASKELSSQ
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHH
MNKEVDDIILKNMLEHEESKVMEEVLA
HHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]