| Definition | Oceanobacillus iheyensis HTE831, complete genome. |
|---|---|
| Accession | NC_004193 |
| Length | 3,630,528 |
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The map label for this gene is 23099823
Identifier: 23099823
GI number: 23099823
Start: 2417698
End: 2419233
Strand: Reverse
Name: 23099823
Synonym: OB2368
Alternate gene names: NA
Gene position: 2419233-2417698 (Counterclockwise)
Preceding gene: 23099824
Following gene: 23099820
Centisome position: 66.64
GC content: 36.0
Gene sequence:
>1536_bases ATGGAAAATCGGTCACAATGGGGAACACGTGCAGGATTTATCTTAGCAGCAGTGGGTTCTGCAGTTGGTTTGGGTAATAT ATGGAGATTTCCTTCGGTGGCTTATGAAAGTGGAGGAGGAGCGTTTTTTATTCCTTACCTTTTTGCATTATTAACCGCTG GTATACCGATATTAATCATGGAATTTACAATGGGGCATAAATATAGAGGTTCAGCTCCATTGACATTTAGCAGAATGAAT AAGAAAGCAGAATTCGTAGGTTGGTGGGCGGTTTTAGTTGCCTTTGTTATATCGACATATTACTCTGTCATTATTGCCTG GGCAATTTCATATTCTATCTTTTCTTTTAATTTATCTTGGGGAGAAGATACAGAAGGATTTTTATTTGGAGATTATTTAA ATCTAGCAGAGGTGCCAGGTCAAGTCGGTGGGTTAGTTCCTGGAGTATTAATACCTTTGATTATAGTTTGGGTTCTTGTA TTAGGTATTTTATTCCGTGGTGTAAAGAAAGGGATTGAAGTAGCTAACCGTATATTTATACCACTTCTGGTTTTAGTATT TTTAGTAATTGTTATTCGAGCAGTAACATTGCCTGGAGCAGCAGAAGGTTTGAACGCATTCTTTACACCAGACTTTAGCA GAATTCTTGAGCCTGATGTATGGATTGCTGCTTATGGTCAAATCTTTTTCAGTTTATCAATTGCCTTTGCTATTATGATT ACCTATTCTAGTTATTTACCAAAAAAATCAGATATAACTAATAATGCATTTATTGTAGGTTTCGGTAACTCTGGATTTGA ATTATTAGCAGGAATTGGAGTTTTTGGTGTATTAGGCTTTATGGCTACCTCCTCAGGAGTTGGTGTAGATGAAGTTGTAG CTGGTGGAGTAGGACTCGCTTTTGTCGTTTTTCCAGCGATTATTAATGAATTACCTGCATTTAATGGATTGTTTGGTGCA TTATTCTTTGTTTCTTTGACATTAGCAGGGATAACATCATTAGTATCCATCACAGAAGCTTATGTATCAGCATTAGTAGA TAAATTTAAGATTACTCGTACAAAAGCTGTATTATTCGGTGGTGGATTAGCAGCGGTAATTTCATTATTATTTGCTAGTC GTGGTGGATTACATTTCTTAGATGTAGTGGACTATTTTATCAATCAATTTGGAGTAGCGATGCTAGGATTGGTTGAGGTC GTTCTAATTGCTTGGATTTTGCGTAAGTCAAATGTATTAAAGTCGCATGCAAATAGTGTTTCTGATATTCGATTAGGATC ATGGTGGACTATTTGTCTAACAGTTATTACTCCGATTGTAATGGGATATATGATGCTCGGGTTATTTAAGCAAAACTTAT TAAGAGAATTTGATACAGCTACAGGAAATTATGGGGAATACGCAAATACCTTCATTACTTTTGGAGGATGGACGGTAGCT ATCGCAGCATTAGTAATCGGTATAGTTTTATCACTAACAAAATGGAAATCCAATGAATTGACTGAATATACCGAACAAGA TAAGGAGGCAAAATAA
Upstream 100 bases:
>100_bases TAATACAAATATAATAGTCTGAAAGTATTAATAATTGATATTTTTCTACATATTAATAAAGAAACAGGCTATTACTATTT TTATATGAGGGGGAAAGTAA
Downstream 100 bases:
>100_bases ATGTCGGCTAGTGCAATTACAGTAATGATAATTGGAATGGTGATTCTGTGGGGCGGATTAGCGGCTAGTATATGGAATAC GATTCGAAAAGGAAAAGCGT
Product: sodium-dependent transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 511; Mature: 511
Protein sequence:
>511_residues MENRSQWGTRAGFILAAVGSAVGLGNIWRFPSVAYESGGGAFFIPYLFALLTAGIPILIMEFTMGHKYRGSAPLTFSRMN KKAEFVGWWAVLVAFVISTYYSVIIAWAISYSIFSFNLSWGEDTEGFLFGDYLNLAEVPGQVGGLVPGVLIPLIIVWVLV LGILFRGVKKGIEVANRIFIPLLVLVFLVIVIRAVTLPGAAEGLNAFFTPDFSRILEPDVWIAAYGQIFFSLSIAFAIMI TYSSYLPKKSDITNNAFIVGFGNSGFELLAGIGVFGVLGFMATSSGVGVDEVVAGGVGLAFVVFPAIINELPAFNGLFGA LFFVSLTLAGITSLVSITEAYVSALVDKFKITRTKAVLFGGGLAAVISLLFASRGGLHFLDVVDYFINQFGVAMLGLVEV VLIAWILRKSNVLKSHANSVSDIRLGSWWTICLTVITPIVMGYMMLGLFKQNLLREFDTATGNYGEYANTFITFGGWTVA IAALVIGIVLSLTKWKSNELTEYTEQDKEAK
Sequences:
>Translated_511_residues MENRSQWGTRAGFILAAVGSAVGLGNIWRFPSVAYESGGGAFFIPYLFALLTAGIPILIMEFTMGHKYRGSAPLTFSRMN KKAEFVGWWAVLVAFVISTYYSVIIAWAISYSIFSFNLSWGEDTEGFLFGDYLNLAEVPGQVGGLVPGVLIPLIIVWVLV LGILFRGVKKGIEVANRIFIPLLVLVFLVIVIRAVTLPGAAEGLNAFFTPDFSRILEPDVWIAAYGQIFFSLSIAFAIMI TYSSYLPKKSDITNNAFIVGFGNSGFELLAGIGVFGVLGFMATSSGVGVDEVVAGGVGLAFVVFPAIINELPAFNGLFGA LFFVSLTLAGITSLVSITEAYVSALVDKFKITRTKAVLFGGGLAAVISLLFASRGGLHFLDVVDYFINQFGVAMLGLVEV VLIAWILRKSNVLKSHANSVSDIRLGSWWTICLTVITPIVMGYMMLGLFKQNLLREFDTATGNYGEYANTFITFGGWTVA IAALVIGIVLSLTKWKSNELTEYTEQDKEAK >Mature_511_residues MENRSQWGTRAGFILAAVGSAVGLGNIWRFPSVAYESGGGAFFIPYLFALLTAGIPILIMEFTMGHKYRGSAPLTFSRMN KKAEFVGWWAVLVAFVISTYYSVIIAWAISYSIFSFNLSWGEDTEGFLFGDYLNLAEVPGQVGGLVPGVLIPLIIVWVLV LGILFRGVKKGIEVANRIFIPLLVLVFLVIVIRAVTLPGAAEGLNAFFTPDFSRILEPDVWIAAYGQIFFSLSIAFAIMI TYSSYLPKKSDITNNAFIVGFGNSGFELLAGIGVFGVLGFMATSSGVGVDEVVAGGVGLAFVVFPAIINELPAFNGLFGA LFFVSLTLAGITSLVSITEAYVSALVDKFKITRTKAVLFGGGLAAVISLLFASRGGLHFLDVVDYFINQFGVAMLGLVEV VLIAWILRKSNVLKSHANSVSDIRLGSWWTICLTVITPIVMGYMMLGLFKQNLLREFDTATGNYGEYANTFITFGGWTVA IAALVIGIVLSLTKWKSNELTEYTEQDKEAK
Specific function: Putative sodium-dependent transporter [H]
COG id: COG0733
COG function: function code R; Na+-dependent transporters of the SNF family
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family [H]
Homologues:
Organism=Homo sapiens, GI21361581, Length=444, Percent_Identity=30.8558558558559, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI188528618, Length=528, Percent_Identity=30.3030303030303, Blast_Score=213, Evalue=4e-55, Organism=Homo sapiens, GI289191351, Length=480, Percent_Identity=30.2083333333333, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI4557046, Length=480, Percent_Identity=30.2083333333333, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI289191377, Length=480, Percent_Identity=30.2083333333333, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI7657587, Length=559, Percent_Identity=27.7280858676207, Blast_Score=199, Evalue=5e-51, Organism=Homo sapiens, GI4507041, Length=556, Percent_Identity=27.158273381295, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI171184408, Length=449, Percent_Identity=30.7349665924276, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI171184406, Length=449, Percent_Identity=30.7349665924276, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI171184404, Length=449, Percent_Identity=30.7349665924276, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI134304856, Length=434, Percent_Identity=32.4884792626728, Blast_Score=190, Evalue=3e-48, Organism=Homo sapiens, GI197276623, Length=527, Percent_Identity=28.4629981024668, Blast_Score=188, Evalue=8e-48, Organism=Homo sapiens, GI54607094, Length=527, Percent_Identity=28.4629981024668, Blast_Score=188, Evalue=8e-48, Organism=Homo sapiens, GI4507043, Length=501, Percent_Identity=26.9461077844311, Blast_Score=185, Evalue=9e-47, Organism=Homo sapiens, GI92859670, Length=518, Percent_Identity=27.4131274131274, Blast_Score=183, Evalue=3e-46, Organism=Homo sapiens, GI194018524, Length=520, Percent_Identity=28.4615384615385, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI5032097, Length=499, Percent_Identity=31.6633266533066, Blast_Score=177, Evalue=3e-44, Organism=Homo sapiens, GI67782317, Length=543, Percent_Identity=29.4659300184162, Blast_Score=175, Evalue=1e-43, Organism=Homo sapiens, GI67782313, Length=543, Percent_Identity=29.4659300184162, Blast_Score=173, Evalue=3e-43, Organism=Homo sapiens, GI67782315, Length=543, Percent_Identity=29.4659300184162, Blast_Score=173, Evalue=3e-43, Organism=Homo sapiens, GI218563756, Length=499, Percent_Identity=31.2625250501002, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI300360519, Length=413, Percent_Identity=27.8450363196126, Blast_Score=160, Evalue=4e-39, Organism=Homo sapiens, GI51468073, Length=305, Percent_Identity=31.4754098360656, Blast_Score=153, Evalue=3e-37, Organism=Homo sapiens, GI58219014, Length=309, Percent_Identity=31.3915857605178, Blast_Score=152, Evalue=6e-37, Organism=Homo sapiens, GI33354281, Length=305, Percent_Identity=31.8032786885246, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI11181770, Length=522, Percent_Identity=26.2452107279693, Blast_Score=145, Evalue=8e-35, Organism=Homo sapiens, GI289191353, Length=396, Percent_Identity=28.030303030303, Blast_Score=142, Evalue=5e-34, Organism=Homo sapiens, GI6005715, Length=332, Percent_Identity=29.5180722891566, Blast_Score=123, Evalue=4e-28, Organism=Homo sapiens, GI218563758, Length=417, Percent_Identity=30.4556354916067, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI12408638, Length=517, Percent_Identity=23.21083172147, Blast_Score=112, Evalue=8e-25, Organism=Homo sapiens, GI21361693, Length=210, Percent_Identity=28.5714285714286, Blast_Score=95, Evalue=1e-19, Organism=Homo sapiens, GI55749589, Length=302, Percent_Identity=26.8211920529801, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI226437581, Length=256, Percent_Identity=28.515625, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI197276625, Length=122, Percent_Identity=34.4262295081967, Blast_Score=85, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17555248, Length=543, Percent_Identity=29.097605893186, Blast_Score=220, Evalue=1e-57, Organism=Caenorhabditis elegans, GI17554804, Length=510, Percent_Identity=30, Blast_Score=180, Evalue=1e-45, Organism=Caenorhabditis elegans, GI25146584, Length=456, Percent_Identity=28.2894736842105, Blast_Score=170, Evalue=2e-42, Organism=Caenorhabditis elegans, GI71995588, Length=478, Percent_Identity=27.4058577405858, Blast_Score=169, Evalue=2e-42, Organism=Caenorhabditis elegans, GI133952791, Length=354, Percent_Identity=29.6610169491525, Blast_Score=146, Evalue=2e-35, Organism=Caenorhabditis elegans, GI71998244, Length=399, Percent_Identity=29.8245614035088, Blast_Score=146, Evalue=3e-35, Organism=Caenorhabditis elegans, GI17569475, Length=450, Percent_Identity=26.8888888888889, Blast_Score=144, Evalue=1e-34, Organism=Caenorhabditis elegans, GI17535731, Length=368, Percent_Identity=27.1739130434783, Blast_Score=109, Evalue=3e-24, Organism=Caenorhabditis elegans, GI115534083, Length=505, Percent_Identity=21.980198019802, Blast_Score=107, Evalue=1e-23, Organism=Caenorhabditis elegans, GI212642127, Length=259, Percent_Identity=31.6602316602317, Blast_Score=107, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17542050, Length=108, Percent_Identity=44.4444444444444, Blast_Score=103, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17542048, Length=419, Percent_Identity=22.4343675417661, Blast_Score=72, Evalue=7e-13, Organism=Drosophila melanogaster, GI281363702, Length=478, Percent_Identity=32.8451882845188, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI281365034, Length=539, Percent_Identity=30.4267161410019, Blast_Score=208, Evalue=8e-54, Organism=Drosophila melanogaster, GI24639514, Length=504, Percent_Identity=30.3571428571429, Blast_Score=207, Evalue=1e-53, Organism=Drosophila melanogaster, GI221329674, Length=504, Percent_Identity=30.3571428571429, Blast_Score=207, Evalue=1e-53, Organism=Drosophila melanogaster, GI19921936, Length=479, Percent_Identity=31.3152400835073, Blast_Score=207, Evalue=2e-53, Organism=Drosophila melanogaster, GI19921352, Length=545, Percent_Identity=29.5412844036697, Blast_Score=205, Evalue=7e-53, Organism=Drosophila melanogaster, GI24584353, Length=545, Percent_Identity=29.5412844036697, Blast_Score=205, Evalue=7e-53, Organism=Drosophila melanogaster, GI24661428, Length=475, Percent_Identity=30.9473684210526, Blast_Score=204, Evalue=1e-52, Organism=Drosophila melanogaster, GI24582567, Length=475, Percent_Identity=30.9473684210526, Blast_Score=203, Evalue=2e-52, Organism=Drosophila melanogaster, GI17136952, Length=475, Percent_Identity=31.3684210526316, Blast_Score=200, Evalue=1e-51, Organism=Drosophila melanogaster, GI24639516, Length=524, Percent_Identity=29.1984732824427, Blast_Score=200, Evalue=2e-51, Organism=Drosophila melanogaster, GI281364394, Length=476, Percent_Identity=31.3025210084034, Blast_Score=198, Evalue=6e-51, Organism=Drosophila melanogaster, GI28574704, Length=476, Percent_Identity=31.3025210084034, Blast_Score=198, Evalue=6e-51, Organism=Drosophila melanogaster, GI17136950, Length=476, Percent_Identity=31.3025210084034, Blast_Score=198, Evalue=6e-51, Organism=Drosophila melanogaster, GI28574702, Length=476, Percent_Identity=31.3025210084034, Blast_Score=198, Evalue=6e-51, Organism=Drosophila melanogaster, GI45551088, Length=481, Percent_Identity=28.4823284823285, Blast_Score=191, Evalue=1e-48, Organism=Drosophila melanogaster, GI24652942, Length=481, Percent_Identity=28.4823284823285, Blast_Score=190, Evalue=2e-48, Organism=Drosophila melanogaster, GI24762620, Length=489, Percent_Identity=29.8568507157464, Blast_Score=189, Evalue=4e-48, Organism=Drosophila melanogaster, GI281364136, Length=469, Percent_Identity=30.9168443496802, Blast_Score=189, Evalue=4e-48, Organism=Drosophila melanogaster, GI24655079, Length=518, Percent_Identity=27.2200772200772, Blast_Score=176, Evalue=3e-44, Organism=Drosophila melanogaster, GI24639853, Length=493, Percent_Identity=28.6004056795132, Blast_Score=174, Evalue=1e-43, Organism=Drosophila melanogaster, GI281363700, Length=331, Percent_Identity=35.9516616314199, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI24582569, Length=446, Percent_Identity=28.6995515695067, Blast_Score=152, Evalue=7e-37, Organism=Drosophila melanogaster, GI24654186, Length=359, Percent_Identity=29.8050139275766, Blast_Score=151, Evalue=1e-36, Organism=Drosophila melanogaster, GI45550877, Length=362, Percent_Identity=28.7292817679558, Blast_Score=145, Evalue=9e-35, Organism=Drosophila melanogaster, GI45551183, Length=244, Percent_Identity=31.5573770491803, Blast_Score=122, Evalue=9e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000175 [H]
Pfam domain/function: PF00209 SNF [H]
EC number: NA
Molecular weight: Translated: 55334; Mature: 55334
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: PS50267 NA_NEUROTRAN_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENRSQWGTRAGFILAAVGSAVGLGNIWRFPSVAYESGGGAFFIPYLFALLTAGIPILIM CCCCCCCCCHHHHHHHHHHHHHCCCCHHCCCCHHEECCCCEEHHHHHHHHHHCCCHHEEH EFTMGHKYRGSAPLTFSRMNKKAEFVGWWAVLVAFVISTYYSVIIAWAISYSIFSFNLSW HHHCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC GEDTEGFLFGDYLNLAEVPGQVGGLVPGVLIPLIIVWVLVLGILFRGVKKGIEVANRIFI CCCCCCEEEECHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLLVLVFLVIVIRAVTLPGAAEGLNAFFTPDFSRILEPDVWIAAYGQIFFSLSIAFAIMI HHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHH TYSSYLPKKSDITNNAFIVGFGNSGFELLAGIGVFGVLGFMATSSGVGVDEVVAGGVGLA HHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHH FVVFPAIINELPAFNGLFGALFFVSLTLAGITSLVSITEAYVSALVDKFKITRTKAVLFG HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GGLAAVISLLFASRGGLHFLDVVDYFINQFGVAMLGLVEVVLIAWILRKSNVLKSHANSV CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SDIRLGSWWTICLTVITPIVMGYMMLGLFKQNLLREFDTATGNYGEYANTFITFGGWTVA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHEEECCHHHH IAALVIGIVLSLTKWKSNELTEYTEQDKEAK HHHHHHHHHHHHHHCCCCCHHHHHHHCCCCC >Mature Secondary Structure MENRSQWGTRAGFILAAVGSAVGLGNIWRFPSVAYESGGGAFFIPYLFALLTAGIPILIM CCCCCCCCCHHHHHHHHHHHHHCCCCHHCCCCHHEECCCCEEHHHHHHHHHHCCCHHEEH EFTMGHKYRGSAPLTFSRMNKKAEFVGWWAVLVAFVISTYYSVIIAWAISYSIFSFNLSW HHHCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC GEDTEGFLFGDYLNLAEVPGQVGGLVPGVLIPLIIVWVLVLGILFRGVKKGIEVANRIFI CCCCCCEEEECHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLLVLVFLVIVIRAVTLPGAAEGLNAFFTPDFSRILEPDVWIAAYGQIFFSLSIAFAIMI HHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHH TYSSYLPKKSDITNNAFIVGFGNSGFELLAGIGVFGVLGFMATSSGVGVDEVVAGGVGLA HHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHH FVVFPAIINELPAFNGLFGALFFVSLTLAGITSLVSITEAYVSALVDKFKITRTKAVLFG HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GGLAAVISLLFASRGGLHFLDVVDYFINQFGVAMLGLVEVVLIAWILRKSNVLKSHANSV CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SDIRLGSWWTICLTVITPIVMGYMMLGLFKQNLLREFDTATGNYGEYANTFITFGGWTVA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHEEECCHHHH IAALVIGIVLSLTKWKSNELTEYTEQDKEAK HHHHHHHHHHHHHHCCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]