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The map label for this gene is ytlD [H]

Identifier: 23099773

GI number: 23099773

Start: 2369617

End: 2370417

Strand: Direct

Name: ytlD [H]

Synonym: OB2318

Alternate gene names: 23099773

Gene position: 2369617-2370417 (Clockwise)

Preceding gene: 23099772

Following gene: 23099782

Centisome position: 65.27

GC content: 35.46

Gene sequence:

>801_bases
ATGAGTGATAAACAACTTTTTTCAAATTATCTTCAAGGCTTAAAAAGAGAGAATAAAATCGTATTTGCTTGGCAAATTTC
CATTCTAATCATTTTGATTAGCTTATGGGAAATCGCCAGTAGATTGTATTGGATAGATCCTTTATTATTTAGTTCTCCAA
GTAGAGTATTTCATTTAATTATTCAACGATTCGCTAATGGTTCACTGTTTTCTCATATTCAGGTTACTTTGTTAGAAACA
ATCCTAGGTTTTTTAATTGGAACCATCGGAGGTATCTTAATAGCAACCTTATTATGGTCTTCAAGACGCTTTGCACGAGT
TATGGACCCTTATCTCGTCATTATGAATGCAATGCCAAAAGTTGCTTTAGGCCCTATTCTCATTGTTGCATTAGGTCCTG
GATACCTTTCCATTATCGCCATGGGTTTCATAATTTCCGTTATCGTTACTACACTAGTAGTATATTCTGCTTTTAATGAG
GTTGATCCGAACTATCAAAAAGTAATGCTTAGTTTTGGGGCTACTAGATGGCAATGCTTTAAAGAGGCGATCTTTCCTTC
CGCATTGCCAGCAATAATATCTACATTAAAAGTAAATGTTGGTCTGTCTTGGGTAGGGGTTATTGTAGGGGAATACCTTG
TTTCCAAACAAGGGTTAGGTTACCTCATCATCTATGGTTTCCAAGTATTCGATTTTACTCTGGTGATGTCGAGCTTAGTA
ATTATTGCTGTACTTGCAACGATAATGTATAAAGTCGTAGAAAAAATTGAACAGGTACTCATACGAAATAGAAGCGTGTA
A

Upstream 100 bases:

>100_bases
TTACACGTAAGAAAACACCCAAAATACCAATTACTTTTCGATAAAGTATGGGATCAATTAGAACAAAAAGATGATTCCTC
ACCACTAAGGGATGATGAAC

Downstream 100 bases:

>100_bases
GTCCAAGGCTTACACGCTTCTATCATTATTGTAAAAAATTGTTTTGATCCGCTTCATACAAGTATGGAGCACATCATCCT
TCATAATAAAACTATACCCT

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MSDKQLFSNYLQGLKRENKIVFAWQISILIILISLWEIASRLYWIDPLLFSSPSRVFHLIIQRFANGSLFSHIQVTLLET
ILGFLIGTIGGILIATLLWSSRRFARVMDPYLVIMNAMPKVALGPILIVALGPGYLSIIAMGFIISVIVTTLVVYSAFNE
VDPNYQKVMLSFGATRWQCFKEAIFPSALPAIISTLKVNVGLSWVGVIVGEYLVSKQGLGYLIIYGFQVFDFTLVMSSLV
IIAVLATIMYKVVEKIEQVLIRNRSV

Sequences:

>Translated_266_residues
MSDKQLFSNYLQGLKRENKIVFAWQISILIILISLWEIASRLYWIDPLLFSSPSRVFHLIIQRFANGSLFSHIQVTLLET
ILGFLIGTIGGILIATLLWSSRRFARVMDPYLVIMNAMPKVALGPILIVALGPGYLSIIAMGFIISVIVTTLVVYSAFNE
VDPNYQKVMLSFGATRWQCFKEAIFPSALPAIISTLKVNVGLSWVGVIVGEYLVSKQGLGYLIIYGFQVFDFTLVMSSLV
IIAVLATIMYKVVEKIEQVLIRNRSV
>Mature_265_residues
SDKQLFSNYLQGLKRENKIVFAWQISILIILISLWEIASRLYWIDPLLFSSPSRVFHLIIQRFANGSLFSHIQVTLLETI
LGFLIGTIGGILIATLLWSSRRFARVMDPYLVIMNAMPKVALGPILIVALGPGYLSIIAMGFIISVIVTTLVVYSAFNEV
DPNYQKVMLSFGATRWQCFKEAIFPSALPAIISTLKVNVGLSWVGVIVGEYLVSKQGLGYLIIYGFQVFDFTLVMSSLVI
IAVLATIMYKVVEKIEQVLIRNRSV

Specific function: Part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=234, Percent_Identity=23.0769230769231, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1786564, Length=206, Percent_Identity=25.2427184466019, Blast_Score=75, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29788; Mature: 29657

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDKQLFSNYLQGLKRENKIVFAWQISILIILISLWEIASRLYWIDPLLFSSPSRVFHLI
CCHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
IQRFANGSLFSHIQVTLLETILGFLIGTIGGILIATLLWSSRRFARVMDPYLVIMNAMPK
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCH
VALGPILIVALGPGYLSIIAMGFIISVIVTTLVVYSAFNEVDPNYQKVMLSFGATRWQCF
HHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHH
KEAIFPSALPAIISTLKVNVGLSWVGVIVGEYLVSKQGLGYLIIYGFQVFDFTLVMSSLV
HHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHH
IIAVLATIMYKVVEKIEQVLIRNRSV
HHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SDKQLFSNYLQGLKRENKIVFAWQISILIILISLWEIASRLYWIDPLLFSSPSRVFHLI
CHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
IQRFANGSLFSHIQVTLLETILGFLIGTIGGILIATLLWSSRRFARVMDPYLVIMNAMPK
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCH
VALGPILIVALGPGYLSIIAMGFIISVIVTTLVVYSAFNEVDPNYQKVMLSFGATRWQCF
HHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHH
KEAIFPSALPAIISTLKVNVGLSWVGVIVGEYLVSKQGLGYLIIYGFQVFDFTLVMSSLV
HHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHH
IIAVLATIMYKVVEKIEQVLIRNRSV
HHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]