Click here to switch to the map view.

The map label for this gene is ydjC [C]

Identifier: 23099726

GI number: 23099726

Start: 2314439

End: 2315131

Strand: Reverse

Name: ydjC [C]

Synonym: OB2271

Alternate gene names: 23099726

Gene position: 2315131-2314439 (Counterclockwise)

Preceding gene: 23099727

Following gene: 23099724

Centisome position: 63.77

GC content: 36.22

Gene sequence:

>693_bases
ATGAGGGTGGAGATTAATGCTGATGATTATGGCTTAACGAAAGGTGTTACCGACGGTATTATCAAAGCACATAGAGGAGG
ATGTGTTACATCAACTACACTTATGATGAATGGTTTATCTGTTGAATATGCTGTTGAACAAGCAAAAAGCAACCCTGCTT
TAAAAGTGGGAATTCATCTCGTTTTAACTTGGGGGAGGCCAATTTCAAATGATGTTGCTTCTTTAGTGCAATCAAATGGT
AAGTTTAGATATACGAGTAGTTACAGAGAAATGGATCCGCCTTCATTAGCTGATGTTGAAAAGGAATGGCGAGCTCAAAT
AGAAGAATTTAAAAAAACGGGTTTAACACTTAACCATATAGATAGTCATCATCACATTCATGCTTGGTCACCATTAACAG
ATGTTATTATAAAATTAGCGAAGGAATTTGAGGTACCTGTAAGGTATGCAGATACGCTAAAGGATTATCCAGAAATATGT
TGGACAGAGAAGATATGGGTTCAATTTTATCAAGATGGAGTTAATGATAATCTGTTTGAACAGTTAAAAGAGGAAAAGGT
TCGATCTTTAGAGATTATGACTCACCCAGGCTTTGTAGATGAAGATTTAAAAGAAAATAGTTCCTATCTGTTTACACGGG
AGAAGGAAGTCGATGTTCTTTGTAGTATCCAAATTCCTGAATGGGTGGAATGA

Upstream 100 bases:

>100_bases
GGAAAATAGAATTTTCAAAGTCATTTTTCCGTGGTGATAAGACTAACTTTACGATAGAACGAACTTATCCAGAATCAAAT
TAAATGATGGAGGGATATCA

Downstream 100 bases:

>100_bases
AAATAATTTTATAGTTTAAGAGCTAGTTGTGTCCGACAATAGTATTCCTAAGATGAGACAAGAATGAACTATAGGATTTC
TCGAAATGTATACATTTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MRVEINADDYGLTKGVTDGIIKAHRGGCVTSTTLMMNGLSVEYAVEQAKSNPALKVGIHLVLTWGRPISNDVASLVQSNG
KFRYTSSYREMDPPSLADVEKEWRAQIEEFKKTGLTLNHIDSHHHIHAWSPLTDVIIKLAKEFEVPVRYADTLKDYPEIC
WTEKIWVQFYQDGVNDNLFEQLKEEKVRSLEIMTHPGFVDEDLKENSSYLFTREKEVDVLCSIQIPEWVE

Sequences:

>Translated_230_residues
MRVEINADDYGLTKGVTDGIIKAHRGGCVTSTTLMMNGLSVEYAVEQAKSNPALKVGIHLVLTWGRPISNDVASLVQSNG
KFRYTSSYREMDPPSLADVEKEWRAQIEEFKKTGLTLNHIDSHHHIHAWSPLTDVIIKLAKEFEVPVRYADTLKDYPEIC
WTEKIWVQFYQDGVNDNLFEQLKEEKVRSLEIMTHPGFVDEDLKENSSYLFTREKEVDVLCSIQIPEWVE
>Mature_230_residues
MRVEINADDYGLTKGVTDGIIKAHRGGCVTSTTLMMNGLSVEYAVEQAKSNPALKVGIHLVLTWGRPISNDVASLVQSNG
KFRYTSSYREMDPPSLADVEKEWRAQIEEFKKTGLTLNHIDSHHHIHAWSPLTDVIIKLAKEFEVPVRYADTLKDYPEIC
WTEKIWVQFYQDGVNDNLFEQLKEEKVRSLEIMTHPGFVDEDLKENSSYLFTREKEVDVLCSIQIPEWVE

Specific function: Unknown

COG id: COG3394

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0249 family

Homologues:

Organism=Homo sapiens, GI63054868, Length=152, Percent_Identity=30.2631578947368, Blast_Score=75, Evalue=6e-14,
Organism=Escherichia coli, GI1788028, Length=228, Percent_Identity=33.3333333333333, Blast_Score=132, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2271_OCEIH (Q8EP46)

Other databases:

- EMBL:   BA000028
- RefSeq:   NP_693192.1
- ProteinModelPortal:   Q8EP46
- SMR:   Q8EP46
- GeneID:   1017374
- GenomeReviews:   BA000028_GR
- KEGG:   oih:OB2271
- NMPDR:   fig|221109.1.peg.2267
- HOGENOM:   HBG716502
- OMA:   AVRPFSD
- ProtClustDB:   CLSK2484979
- BioCyc:   OIHE221109:OB2271-MONOMER
- HAMAP:   MF_01246
- InterPro:   IPR002509
- InterPro:   IPR006879
- InterPro:   IPR022948
- Gene3D:   G3DSA:3.20.20.370

Pfam domain/function: PF04794 YdjC

EC number: NA

Molecular weight: Translated: 26373; Mature: 26373

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVEINADDYGLTKGVTDGIIKAHRGGCVTSTTLMMNGLSVEYAVEQAKSNPALKVGIHL
CEEEECCCCCCCCCCCHHHHHHHCCCCCEEHHHHHHCCCCHHHHHHHHCCCCCEEEEEEE
VLTWGRPISNDVASLVQSNGKFRYTSSYREMDPPSLADVEKEWRAQIEEFKKTGLTLNHI
EEECCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEC
DSHHHIHAWSPLTDVIIKLAKEFEVPVRYADTLKDYPEICWTEKIWVQFYQDGVNDNLFE
CCCCEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
QLKEEKVRSLEIMTHPGFVDEDLKENSSYLFTREKEVDVLCSIQIPEWVE
HHHHHHHHHEEEEECCCCCCHHHHCCCCEEEEECCCCEEEEEECCCCCCC
>Mature Secondary Structure
MRVEINADDYGLTKGVTDGIIKAHRGGCVTSTTLMMNGLSVEYAVEQAKSNPALKVGIHL
CEEEECCCCCCCCCCCHHHHHHHCCCCCEEHHHHHHCCCCHHHHHHHHCCCCCEEEEEEE
VLTWGRPISNDVASLVQSNGKFRYTSSYREMDPPSLADVEKEWRAQIEEFKKTGLTLNHI
EEECCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEC
DSHHHIHAWSPLTDVIIKLAKEFEVPVRYADTLKDYPEICWTEKIWVQFYQDGVNDNLFE
CCCCEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
QLKEEKVRSLEIMTHPGFVDEDLKENSSYLFTREKEVDVLCSIQIPEWVE
HHHHHHHHHEEEEECCCCCCHHHHCCCCEEEEECCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12235376