| Definition | Oceanobacillus iheyensis HTE831, complete genome. |
|---|---|
| Accession | NC_004193 |
| Length | 3,630,528 |
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The map label for this gene is cshB [H]
Identifier: 23099394
GI number: 23099394
Start: 1965604
End: 1966902
Strand: Reverse
Name: cshB [H]
Synonym: OB1939
Alternate gene names: 23099394
Gene position: 1966902-1965604 (Counterclockwise)
Preceding gene: 23099395
Following gene: 23099393
Centisome position: 54.18
GC content: 32.72
Gene sequence:
>1299_bases ATGAAATTTGAAGATTTACAATTAAACCCCATTGTAAATGATGTTATTGAACAGTTAAAATTTAAAAATCCTACAGAAAT TCAGGAAAAGGTTATACCTGCCATTATAAAAGGAGATAGTGTAGTTGGACAATCTCGTACGGGATCTGGTAAAACACATG CCTTTTTGTTACCACTTTTTCACGGCTTAGAAAGTGATAAAAAAGAAGTTCAGTTTGTTATCACTGCACCCACTAGGGAA CTGGCCACACAATTATATGGTGAAGTAAGAAATATAATAACATTAGCTGATAAAACGAAAGAATGGAATGCAAAGTTGCT CGTTGGAGGTACCGATAAACAAAAAATGACGGAGAAGTTAAAAACACCTCCTCATATTATTGTCGGAACTCCAGGTCGAA TTTTAGATCTTGTTAAAAGTGGAGCTCTATCTATTTATACAGCAAAATCTTTTGTTGTTGATGAAGCTGACTTGATGTTA GATCTTGGGTTTATTGAAGAAGTAGATCAATTATTAGTTAGGTCAAAACAAGATATACAATTGCTTGTATTTTCTGCAAC TATTCCACAACGTTTACAGCATTTTTTCAAGAAATATATAAAAAATCCATTAAATGTAAAAATTAATGAACACTTTTCAC CAGAAAAAATGGATCATCGATTAATTCGAAAAAAACATCGAAATGAAGCAGAAATCATTTGGGAAATTTCTCAATCTATT CACCCTTATCTTGCGCTTATATTTACTAACGGAAAACAACAAGCAAATGAATTGGCAGATCAATTATTAGAGTATGGGTT AGAAGTAGGAGTTATTCACGGTGGATTAACCCCGAGAGAACGAAAACGGGTCTTAAAGGAAATTCAAAACCTTAGATATC AATACGTTGTAGCTACTGATTTAGCTGCGAGAGGAATTGATATAAAGGGTGTAAGCCATGTTATAAACGCGCAAATTCCA AAAGAAGAATCATTTTATATTCATCGAGTTGGTAGAACTGCAAGAGCTGGACTAGAGGGAACAGCCATAAGTATATATGA TGACAATGATTTATCATTAATTCAACGATTGGAACAAAAAGGTTTAATATTTGAATTCGTAGAAGTTAAAAATGGGGAAT GGAAAACTGACCCTTCATGGAATGAAAGGCAACGTCGTCAAAAAGTAGATACTTCTATTGATAAAGAGGCTTGGAAACGA GTATCTAAACAGAAAAAAGTTAAACCAGGATATAAGAAGAAACAAAAACGCCAACAACAAGAAATTAAAAAACAGTTAAC TAAAAAAAAGAAAAAGTAA
Upstream 100 bases:
>100_bases ACAGACGATGGAATTGGATAAGGATTTTATAGAGGTATCTGAAATTAATACAGATCCATTCCAGTTTGTGTAGAAGTAGA CAGGAGGTCATTACATGGGT
Downstream 100 bases:
>100_bases AGTAAGCGAAGAGGAGGAGTAAAATGGTAAAGATTGGATCACATGTTTCAATGAATGGCAAGAAAATGCTATTAGGCTCC AGTGAAGATGCTGTTCAATA
Product: ATP-dependent RNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MKFEDLQLNPIVNDVIEQLKFKNPTEIQEKVIPAIIKGDSVVGQSRTGSGKTHAFLLPLFHGLESDKKEVQFVITAPTRE LATQLYGEVRNIITLADKTKEWNAKLLVGGTDKQKMTEKLKTPPHIIVGTPGRILDLVKSGALSIYTAKSFVVDEADLML DLGFIEEVDQLLVRSKQDIQLLVFSATIPQRLQHFFKKYIKNPLNVKINEHFSPEKMDHRLIRKKHRNEAEIIWEISQSI HPYLALIFTNGKQQANELADQLLEYGLEVGVIHGGLTPRERKRVLKEIQNLRYQYVVATDLAARGIDIKGVSHVINAQIP KEESFYIHRVGRTARAGLEGTAISIYDDNDLSLIQRLEQKGLIFEFVEVKNGEWKTDPSWNERQRRQKVDTSIDKEAWKR VSKQKKVKPGYKKKQKRQQQEIKKQLTKKKKK
Sequences:
>Translated_432_residues MKFEDLQLNPIVNDVIEQLKFKNPTEIQEKVIPAIIKGDSVVGQSRTGSGKTHAFLLPLFHGLESDKKEVQFVITAPTRE LATQLYGEVRNIITLADKTKEWNAKLLVGGTDKQKMTEKLKTPPHIIVGTPGRILDLVKSGALSIYTAKSFVVDEADLML DLGFIEEVDQLLVRSKQDIQLLVFSATIPQRLQHFFKKYIKNPLNVKINEHFSPEKMDHRLIRKKHRNEAEIIWEISQSI HPYLALIFTNGKQQANELADQLLEYGLEVGVIHGGLTPRERKRVLKEIQNLRYQYVVATDLAARGIDIKGVSHVINAQIP KEESFYIHRVGRTARAGLEGTAISIYDDNDLSLIQRLEQKGLIFEFVEVKNGEWKTDPSWNERQRRQKVDTSIDKEAWKR VSKQKKVKPGYKKKQKRQQQEIKKQLTKKKKK >Mature_432_residues MKFEDLQLNPIVNDVIEQLKFKNPTEIQEKVIPAIIKGDSVVGQSRTGSGKTHAFLLPLFHGLESDKKEVQFVITAPTRE LATQLYGEVRNIITLADKTKEWNAKLLVGGTDKQKMTEKLKTPPHIIVGTPGRILDLVKSGALSIYTAKSFVVDEADLML DLGFIEEVDQLLVRSKQDIQLLVFSATIPQRLQHFFKKYIKNPLNVKINEHFSPEKMDHRLIRKKHRNEAEIIWEISQSI HPYLALIFTNGKQQANELADQLLEYGLEVGVIHGGLTPRERKRVLKEIQNLRYQYVVATDLAARGIDIKGVSHVINAQIP KEESFYIHRVGRTARAGLEGTAISIYDDNDLSLIQRLEQKGLIFEFVEVKNGEWKTDPSWNERQRRQKVDTSIDKEAWKR VSKQKKVKPGYKKKQKRQQQEIKKQLTKKKKK
Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm, nucleoid. Note=Shows transcription-dependent localization at subcellular sites surrounding the nucleoid [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI7661920, Length=341, Percent_Identity=29.9120234604106, Blast_Score=191, Evalue=1e-48, Organism=Homo sapiens, GI224593278, Length=365, Percent_Identity=30.4109589041096, Blast_Score=187, Evalue=1e-47, Organism=Homo sapiens, GI20149629, Length=359, Percent_Identity=31.4763231197772, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI164664518, Length=351, Percent_Identity=30.1994301994302, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI262118318, Length=370, Percent_Identity=32.1621621621622, Blast_Score=183, Evalue=2e-46, Organism=Homo sapiens, GI262231852, Length=373, Percent_Identity=32.171581769437, Blast_Score=182, Evalue=6e-46, Organism=Homo sapiens, GI216548263, Length=373, Percent_Identity=32.171581769437, Blast_Score=182, Evalue=6e-46, Organism=Homo sapiens, GI13518015, Length=373, Percent_Identity=32.171581769437, Blast_Score=182, Evalue=8e-46, Organism=Homo sapiens, GI31542656, Length=367, Percent_Identity=32.1525885558583, Blast_Score=181, Evalue=2e-45, Organism=Homo sapiens, GI50659095, Length=381, Percent_Identity=33.3333333333333, Blast_Score=179, Evalue=3e-45, Organism=Homo sapiens, GI301171467, Length=404, Percent_Identity=29.9504950495049, Blast_Score=179, Evalue=5e-45, Organism=Homo sapiens, GI87196351, Length=405, Percent_Identity=29.8765432098765, Blast_Score=179, Evalue=6e-45, Organism=Homo sapiens, GI301171475, Length=405, Percent_Identity=29.8765432098765, Blast_Score=179, Evalue=6e-45, Organism=Homo sapiens, GI21071032, Length=356, Percent_Identity=31.7415730337079, Blast_Score=178, Evalue=9e-45, Organism=Homo sapiens, GI222352149, Length=371, Percent_Identity=29.9191374663073, Blast_Score=177, Evalue=1e-44, Organism=Homo sapiens, GI169881239, Length=405, Percent_Identity=30.6172839506173, Blast_Score=177, Evalue=1e-44, Organism=Homo sapiens, GI13514809, Length=405, Percent_Identity=30.6172839506173, Blast_Score=177, Evalue=1e-44, Organism=Homo sapiens, GI83700235, Length=360, Percent_Identity=31.3888888888889, Blast_Score=177, Evalue=1e-44, Organism=Homo sapiens, GI41327771, Length=400, Percent_Identity=29.5, Blast_Score=176, Evalue=5e-44, Organism=Homo sapiens, GI4503529, Length=364, Percent_Identity=30.7692307692308, Blast_Score=175, Evalue=7e-44, Organism=Homo sapiens, GI13129006, Length=382, Percent_Identity=32.1989528795811, Blast_Score=174, Evalue=1e-43, Organism=Homo sapiens, GI21040371, Length=363, Percent_Identity=29.2011019283747, Blast_Score=173, Evalue=3e-43, Organism=Homo sapiens, GI51094101, Length=361, Percent_Identity=31.5789473684211, Blast_Score=172, Evalue=4e-43, Organism=Homo sapiens, GI164419743, Length=361, Percent_Identity=31.5789473684211, Blast_Score=172, Evalue=4e-43, Organism=Homo sapiens, GI4758112, Length=363, Percent_Identity=28.6501377410468, Blast_Score=169, Evalue=6e-42, Organism=Homo sapiens, GI18375623, Length=363, Percent_Identity=28.6501377410468, Blast_Score=169, Evalue=6e-42, Organism=Homo sapiens, GI188035877, Length=355, Percent_Identity=30.9859154929577, Blast_Score=169, Evalue=6e-42, Organism=Homo sapiens, GI41327773, Length=336, Percent_Identity=30.6547619047619, Blast_Score=166, Evalue=6e-41, Organism=Homo sapiens, GI41327776, Length=358, Percent_Identity=29.608938547486, Blast_Score=165, Evalue=9e-41, Organism=Homo sapiens, GI45446747, Length=354, Percent_Identity=30.225988700565, Blast_Score=164, Evalue=1e-40, Organism=Homo sapiens, GI45446743, Length=354, Percent_Identity=30.225988700565, Blast_Score=164, Evalue=1e-40, Organism=Homo sapiens, GI4758138, Length=369, Percent_Identity=30.0813008130081, Blast_Score=164, Evalue=1e-40, Organism=Homo sapiens, GI148613856, Length=372, Percent_Identity=30.9139784946237, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI38201710, Length=372, Percent_Identity=30.9139784946237, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI256223453, Length=377, Percent_Identity=28.3819628647215, Blast_Score=155, Evalue=8e-38, Organism=Homo sapiens, GI13514831, Length=369, Percent_Identity=28.4552845528455, Blast_Score=155, Evalue=9e-38, Organism=Homo sapiens, GI55749865, Length=367, Percent_Identity=25.6130790190736, Blast_Score=145, Evalue=5e-35, Organism=Homo sapiens, GI38569505, Length=347, Percent_Identity=29.6829971181556, Blast_Score=142, Evalue=5e-34, Organism=Homo sapiens, GI38327634, Length=397, Percent_Identity=29.4710327455919, Blast_Score=142, Evalue=7e-34, Organism=Homo sapiens, GI38569503, Length=347, Percent_Identity=29.6829971181556, Blast_Score=142, Evalue=9e-34, Organism=Homo sapiens, GI6005743, Length=370, Percent_Identity=28.3783783783784, Blast_Score=141, Evalue=1e-33, Organism=Homo sapiens, GI8922886, Length=370, Percent_Identity=28.1081081081081, Blast_Score=141, Evalue=1e-33, Organism=Homo sapiens, GI164419732, Length=355, Percent_Identity=27.6056338028169, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI41327779, Length=360, Percent_Identity=30.2777777777778, Blast_Score=139, Evalue=7e-33, Organism=Homo sapiens, GI9506931, Length=392, Percent_Identity=26.7857142857143, Blast_Score=138, Evalue=1e-32, Organism=Homo sapiens, GI62241022, Length=354, Percent_Identity=28.2485875706215, Blast_Score=134, Evalue=1e-31, Organism=Homo sapiens, GI17505907, Length=418, Percent_Identity=24.1626794258373, Blast_Score=130, Evalue=3e-30, Organism=Homo sapiens, GI62241024, Length=331, Percent_Identity=28.3987915407855, Blast_Score=125, Evalue=1e-28, Organism=Homo sapiens, GI9966805, Length=324, Percent_Identity=30.8641975308642, Blast_Score=118, Evalue=8e-27, Organism=Homo sapiens, GI256773275, Length=402, Percent_Identity=27.1144278606965, Blast_Score=111, Evalue=1e-24, Organism=Homo sapiens, GI154759257, Length=398, Percent_Identity=27.1356783919598, Blast_Score=105, Evalue=1e-22, Organism=Homo sapiens, GI20336298, Length=218, Percent_Identity=27.5229357798165, Blast_Score=89, Evalue=8e-18, Organism=Homo sapiens, GI4826686, Length=110, Percent_Identity=36.3636363636364, Blast_Score=77, Evalue=3e-14, Organism=Escherichia coli, GI87082221, Length=375, Percent_Identity=32.5333333333333, Blast_Score=210, Evalue=1e-55, Organism=Escherichia coli, GI1787605, Length=364, Percent_Identity=31.8681318681319, Blast_Score=204, Evalue=6e-54, Organism=Escherichia coli, GI1787016, Length=391, Percent_Identity=32.7365728900256, Blast_Score=201, Evalue=9e-53, Organism=Escherichia coli, GI1790214, Length=355, Percent_Identity=33.8028169014084, Blast_Score=184, Evalue=8e-48, Organism=Escherichia coli, GI1788930, Length=344, Percent_Identity=31.9767441860465, Blast_Score=169, Evalue=2e-43, Organism=Caenorhabditis elegans, GI71987143, Length=359, Percent_Identity=29.2479108635098, Blast_Score=195, Evalue=3e-50, Organism=Caenorhabditis elegans, GI71995724, Length=341, Percent_Identity=29.3255131964809, Blast_Score=186, Evalue=2e-47, Organism=Caenorhabditis elegans, GI17507121, Length=341, Percent_Identity=29.0322580645161, Blast_Score=185, Evalue=4e-47, Organism=Caenorhabditis elegans, GI17537549, Length=366, Percent_Identity=32.2404371584699, Blast_Score=179, Evalue=2e-45, Organism=Caenorhabditis elegans, GI17507945, Length=349, Percent_Identity=32.6647564469914, Blast_Score=179, Evalue=3e-45, Organism=Caenorhabditis elegans, GI17552114, Length=360, Percent_Identity=28.3333333333333, Blast_Score=177, Evalue=1e-44, Organism=Caenorhabditis elegans, GI86570094, Length=344, Percent_Identity=30.2325581395349, Blast_Score=174, Evalue=6e-44, Organism=Caenorhabditis elegans, GI71999646, Length=366, Percent_Identity=30.6010928961749, Blast_Score=174, Evalue=8e-44, Organism=Caenorhabditis elegans, GI71999644, Length=371, Percent_Identity=29.1105121293801, Blast_Score=174, Evalue=1e-43, Organism=Caenorhabditis elegans, GI71995718, Length=379, Percent_Identity=30.8707124010554, Blast_Score=174, Evalue=1e-43, Organism=Caenorhabditis elegans, GI17555296, Length=362, Percent_Identity=29.0055248618785, Blast_Score=173, Evalue=1e-43, Organism=Caenorhabditis elegans, GI71982858, Length=363, Percent_Identity=30.0275482093664, Blast_Score=173, Evalue=2e-43, Organism=Caenorhabditis elegans, GI193206561, Length=347, Percent_Identity=29.3948126801153, Blast_Score=172, Evalue=3e-43, Organism=Caenorhabditis elegans, GI17510559, Length=390, Percent_Identity=28.2051282051282, Blast_Score=170, Evalue=1e-42, Organism=Caenorhabditis elegans, GI17510307, Length=384, Percent_Identity=31.25, Blast_Score=170, Evalue=1e-42, Organism=Caenorhabditis elegans, GI17510309, Length=384, Percent_Identity=31.25, Blast_Score=170, Evalue=1e-42, Organism=Caenorhabditis elegans, GI71995514, Length=384, Percent_Identity=31.25, Blast_Score=169, Evalue=2e-42, Organism=Caenorhabditis elegans, GI17552642, Length=367, Percent_Identity=30.2452316076294, Blast_Score=167, Evalue=7e-42, Organism=Caenorhabditis elegans, GI32565321, Length=390, Percent_Identity=29.7435897435897, Blast_Score=167, Evalue=7e-42, Organism=Caenorhabditis elegans, GI115532546, Length=369, Percent_Identity=28.4552845528455, Blast_Score=167, Evalue=9e-42, Organism=Caenorhabditis elegans, GI115532548, Length=369, Percent_Identity=28.4552845528455, Blast_Score=167, Evalue=1e-41, Organism=Caenorhabditis elegans, GI17507877, Length=385, Percent_Identity=30.9090909090909, Blast_Score=157, Evalue=8e-39, Organism=Caenorhabditis elegans, GI115533224, Length=343, Percent_Identity=30.9037900874636, Blast_Score=156, Evalue=2e-38, Organism=Caenorhabditis elegans, GI17509811, Length=380, Percent_Identity=27.3684210526316, Blast_Score=155, Evalue=5e-38, Organism=Caenorhabditis elegans, GI17507641, Length=389, Percent_Identity=31.1053984575836, Blast_Score=152, Evalue=3e-37, Organism=Caenorhabditis elegans, GI17507879, Length=385, Percent_Identity=31.4285714285714, Blast_Score=151, Evalue=7e-37, Organism=Caenorhabditis elegans, GI71990816, Length=380, Percent_Identity=30.2631578947368, Blast_Score=147, Evalue=1e-35, Organism=Caenorhabditis elegans, GI17553716, Length=341, Percent_Identity=26.3929618768328, Blast_Score=146, Evalue=2e-35, Organism=Caenorhabditis elegans, GI32564046, Length=382, Percent_Identity=30.6282722513089, Blast_Score=146, Evalue=2e-35, Organism=Caenorhabditis elegans, GI17507881, Length=438, Percent_Identity=27.8538812785388, Blast_Score=141, Evalue=6e-34, Organism=Caenorhabditis elegans, GI17505370, Length=366, Percent_Identity=29.2349726775956, Blast_Score=133, Evalue=2e-31, Organism=Caenorhabditis elegans, GI17536099, Length=384, Percent_Identity=27.6041666666667, Blast_Score=129, Evalue=3e-30, Organism=Caenorhabditis elegans, GI17536101, Length=384, Percent_Identity=27.6041666666667, Blast_Score=128, Evalue=7e-30, Organism=Caenorhabditis elegans, GI25148203, Length=415, Percent_Identity=25.3012048192771, Blast_Score=126, Evalue=2e-29, Organism=Caenorhabditis elegans, GI17536103, Length=385, Percent_Identity=27.7922077922078, Blast_Score=124, Evalue=1e-28, Organism=Caenorhabditis elegans, GI17508543, Length=383, Percent_Identity=26.8929503916449, Blast_Score=118, Evalue=7e-27, Organism=Caenorhabditis elegans, GI193208216, Length=384, Percent_Identity=26.8229166666667, Blast_Score=117, Evalue=1e-26, Organism=Caenorhabditis elegans, GI71982862, Length=202, Percent_Identity=35.1485148514851, Blast_Score=117, Evalue=1e-26, Organism=Caenorhabditis elegans, GI71997889, Length=364, Percent_Identity=27.7472527472527, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17556951, Length=397, Percent_Identity=25.1889168765743, Blast_Score=106, Evalue=2e-23, Organism=Caenorhabditis elegans, GI25148291, Length=335, Percent_Identity=25.6716417910448, Blast_Score=102, Evalue=3e-22, Organism=Caenorhabditis elegans, GI71987152, Length=97, Percent_Identity=35.0515463917526, Blast_Score=72, Evalue=6e-13, Organism=Saccharomyces cerevisiae, GI6325138, Length=381, Percent_Identity=32.2834645669291, Blast_Score=197, Evalue=3e-51, Organism=Saccharomyces cerevisiae, GI6324778, Length=382, Percent_Identity=30.3664921465969, Blast_Score=187, Evalue=3e-48, Organism=Saccharomyces cerevisiae, GI6321856, Length=363, Percent_Identity=33.0578512396694, Blast_Score=187, Evalue=4e-48, Organism=Saccharomyces cerevisiae, GI6321360, Length=389, Percent_Identity=33.1619537275064, Blast_Score=186, Evalue=8e-48, Organism=Saccharomyces cerevisiae, GI6324217, Length=347, Percent_Identity=32.5648414985591, Blast_Score=183, Evalue=5e-47, Organism=Saccharomyces cerevisiae, GI6320041, Length=358, Percent_Identity=30.7262569832402, Blast_Score=181, Evalue=2e-46, Organism=Saccharomyces cerevisiae, GI6320224, Length=362, Percent_Identity=30.6629834254144, Blast_Score=180, Evalue=4e-46, Organism=Saccharomyces cerevisiae, GI6320449, Length=385, Percent_Identity=30.9090909090909, Blast_Score=175, Evalue=1e-44, Organism=Saccharomyces cerevisiae, GI6323021, Length=356, Percent_Identity=30.6179775280899, Blast_Score=174, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6320119, Length=349, Percent_Identity=30.0859598853868, Blast_Score=170, Evalue=4e-43, Organism=Saccharomyces cerevisiae, GI6324620, Length=385, Percent_Identity=30.3896103896104, Blast_Score=169, Evalue=8e-43, Organism=Saccharomyces cerevisiae, GI6319714, Length=374, Percent_Identity=29.9465240641711, Blast_Score=164, Evalue=3e-41, Organism=Saccharomyces cerevisiae, GI6320400, Length=385, Percent_Identity=31.6883116883117, Blast_Score=163, Evalue=6e-41, Organism=Saccharomyces cerevisiae, GI6322912, Length=360, Percent_Identity=30, Blast_Score=160, Evalue=5e-40, Organism=Saccharomyces cerevisiae, GI6322323, Length=360, Percent_Identity=30, Blast_Score=160, Evalue=5e-40, Organism=Saccharomyces cerevisiae, GI6320173, Length=414, Percent_Identity=28.5024154589372, Blast_Score=158, Evalue=1e-39, Organism=Saccharomyces cerevisiae, GI6323947, Length=368, Percent_Identity=27.9891304347826, Blast_Score=155, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6321963, Length=377, Percent_Identity=30.2387267904509, Blast_Score=155, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6321267, Length=430, Percent_Identity=30.6976744186047, Blast_Score=147, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6322427, Length=360, Percent_Identity=29.7222222222222, Blast_Score=144, Evalue=2e-35, Organism=Saccharomyces cerevisiae, GI6319618, Length=402, Percent_Identity=29.6019900497512, Blast_Score=142, Evalue=1e-34, Organism=Saccharomyces cerevisiae, GI6321111, Length=372, Percent_Identity=27.6881720430108, Blast_Score=139, Evalue=6e-34, Organism=Saccharomyces cerevisiae, GI6323306, Length=321, Percent_Identity=25.5451713395639, Blast_Score=108, Evalue=1e-24, Organism=Saccharomyces cerevisiae, GI6321374, Length=446, Percent_Identity=25.1121076233184, Blast_Score=92, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6322876, Length=186, Percent_Identity=30.6451612903226, Blast_Score=86, Evalue=1e-17, Organism=Drosophila melanogaster, GI24645031, Length=367, Percent_Identity=29.4277929155313, Blast_Score=191, Evalue=7e-49, Organism=Drosophila melanogaster, GI24584399, Length=363, Percent_Identity=31.9559228650138, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI24585582, Length=361, Percent_Identity=31.8559556786704, Blast_Score=184, Evalue=9e-47, Organism=Drosophila melanogaster, GI28575014, Length=337, Percent_Identity=31.7507418397626, Blast_Score=182, Evalue=4e-46, Organism=Drosophila melanogaster, GI17985987, Length=383, Percent_Identity=31.0704960835509, Blast_Score=181, Evalue=6e-46, Organism=Drosophila melanogaster, GI21355075, Length=352, Percent_Identity=30.6818181818182, Blast_Score=181, Evalue=8e-46, Organism=Drosophila melanogaster, GI24584994, Length=388, Percent_Identity=30.9278350515464, Blast_Score=179, Evalue=3e-45, Organism=Drosophila melanogaster, GI24582080, Length=360, Percent_Identity=29.4444444444444, Blast_Score=179, Evalue=3e-45, Organism=Drosophila melanogaster, GI24582078, Length=360, Percent_Identity=29.4444444444444, Blast_Score=179, Evalue=3e-45, Organism=Drosophila melanogaster, GI17136248, Length=360, Percent_Identity=29.4444444444444, Blast_Score=179, Evalue=3e-45, Organism=Drosophila melanogaster, GI24582075, Length=360, Percent_Identity=29.4444444444444, Blast_Score=179, Evalue=3e-45, Organism=Drosophila melanogaster, GI24644479, Length=366, Percent_Identity=30.0546448087432, Blast_Score=176, Evalue=3e-44, Organism=Drosophila melanogaster, GI281361218, Length=366, Percent_Identity=30.0546448087432, Blast_Score=175, Evalue=4e-44, Organism=Drosophila melanogaster, GI24644481, Length=366, Percent_Identity=30.0546448087432, Blast_Score=175, Evalue=4e-44, Organism=Drosophila melanogaster, GI24644487, Length=366, Percent_Identity=30.0546448087432, Blast_Score=175, Evalue=4e-44, Organism=Drosophila melanogaster, GI45551833, Length=366, Percent_Identity=30.0546448087432, Blast_Score=175, Evalue=4e-44, Organism=Drosophila melanogaster, GI24644485, Length=366, Percent_Identity=30.0546448087432, Blast_Score=175, Evalue=4e-44, Organism=Drosophila melanogaster, GI24644483, Length=366, Percent_Identity=30.0546448087432, Blast_Score=175, Evalue=4e-44, Organism=Drosophila melanogaster, GI21356161, Length=363, Percent_Identity=30.0275482093664, Blast_Score=174, Evalue=8e-44, Organism=Drosophila melanogaster, GI24583281, Length=339, Percent_Identity=29.4985250737463, Blast_Score=172, Evalue=3e-43, Organism=Drosophila melanogaster, GI24583279, Length=339, Percent_Identity=29.4985250737463, Blast_Score=172, Evalue=4e-43, Organism=Drosophila melanogaster, GI17977678, Length=357, Percent_Identity=31.0924369747899, Blast_Score=172, Evalue=6e-43, Organism=Drosophila melanogaster, GI17136814, Length=376, Percent_Identity=32.1808510638298, Blast_Score=171, Evalue=7e-43, Organism=Drosophila melanogaster, GI24642151, Length=347, Percent_Identity=31.700288184438, Blast_Score=171, Evalue=1e-42, Organism=Drosophila melanogaster, GI24581954, Length=364, Percent_Identity=29.9450549450549, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI24581952, Length=364, Percent_Identity=29.9450549450549, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI24581956, Length=364, Percent_Identity=29.9450549450549, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI24662330, Length=346, Percent_Identity=29.4797687861272, Blast_Score=165, Evalue=7e-41, Organism=Drosophila melanogaster, GI28574962, Length=375, Percent_Identity=30.9333333333333, Blast_Score=164, Evalue=7e-41, Organism=Drosophila melanogaster, GI18857967, Length=382, Percent_Identity=29.0575916230367, Blast_Score=151, Evalue=7e-37, Organism=Drosophila melanogaster, GI24666101, Length=358, Percent_Identity=29.608938547486, Blast_Score=149, Evalue=3e-36, Organism=Drosophila melanogaster, GI28571808, Length=355, Percent_Identity=29.0140845070423, Blast_Score=141, Evalue=8e-34, Organism=Drosophila melanogaster, GI28571809, Length=355, Percent_Identity=29.0140845070423, Blast_Score=141, Evalue=8e-34, Organism=Drosophila melanogaster, GI17647335, Length=353, Percent_Identity=26.9121813031161, Blast_Score=141, Evalue=9e-34, Organism=Drosophila melanogaster, GI24643725, Length=442, Percent_Identity=25.1131221719457, Blast_Score=133, Evalue=2e-31, Organism=Drosophila melanogaster, GI281365720, Length=318, Percent_Identity=30.188679245283, Blast_Score=133, Evalue=3e-31, Organism=Drosophila melanogaster, GI21355559, Length=414, Percent_Identity=28.0193236714976, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI24642822, Length=372, Percent_Identity=27.9569892473118, Blast_Score=127, Evalue=1e-29, Organism=Drosophila melanogaster, GI24668515, Length=334, Percent_Identity=27.8443113772455, Blast_Score=122, Evalue=5e-28, Organism=Drosophila melanogaster, GI17136666, Length=418, Percent_Identity=26.7942583732057, Blast_Score=120, Evalue=2e-27, Organism=Drosophila melanogaster, GI20130173, Length=418, Percent_Identity=26.555023923445, Blast_Score=116, Evalue=4e-26, Organism=Drosophila melanogaster, GI19920478, Length=389, Percent_Identity=27.2493573264781, Blast_Score=105, Evalue=5e-23, Organism=Drosophila melanogaster, GI18859659, Length=225, Percent_Identity=29.7777777777778, Blast_Score=97, Evalue=3e-20, Organism=Drosophila melanogaster, GI28571338, Length=225, Percent_Identity=29.7777777777778, Blast_Score=97, Evalue=3e-20, Organism=Drosophila melanogaster, GI24640164, Length=351, Percent_Identity=24.2165242165242, Blast_Score=91, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 49622; Mature: 49622
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFEDLQLNPIVNDVIEQLKFKNPTEIQEKVIPAIIKGDSVVGQSRTGSGKTHAFLLPLF CCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEECCCCCCCCCCEEEHHHHH HGLESDKKEVQFVITAPTRELATQLYGEVRNIITLADKTKEWNAKLLVGGTDKQKMTEKL HCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHH KTPPHIIVGTPGRILDLVKSGALSIYTAKSFVVDEADLMLDLGFIEEVDQLLVRSKQDIQ CCCCEEEEECCHHHHHHHHCCCEEEEEEHHHEECCHHHHEEHHHHHHHHHHHHCCCCCCE LLVFSATIPQRLQHFFKKYIKNPLNVKINEHFSPEKMDHRLIRKKHRNEAEIIWEISQSI EEEEECHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCC HPYLALIFTNGKQQANELADQLLEYGLEVGVIHGGLTPRERKRVLKEIQNLRYQYVVATD CCEEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCEEEEEEEH LAARGIDIKGVSHVINAQIPKEESFYIHRVGRTARAGLEGTAISIYDDNDLSLIQRLEQK HHHCCCCCCCHHHHHCCCCCCCCCEEEEECCCHHHCCCCCCEEEEEECCCHHHHHHHHHC GLIFEFVEVKNGEWKTDPSWNERQRRQKVDTSIDKEAWKRVSKQKKVKPGYKKKQKRQQQ CCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH EIKKQLTKKKKK HHHHHHHHHCCC >Mature Secondary Structure MKFEDLQLNPIVNDVIEQLKFKNPTEIQEKVIPAIIKGDSVVGQSRTGSGKTHAFLLPLF CCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEECCCCCCCCCCEEEHHHHH HGLESDKKEVQFVITAPTRELATQLYGEVRNIITLADKTKEWNAKLLVGGTDKQKMTEKL HCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHH KTPPHIIVGTPGRILDLVKSGALSIYTAKSFVVDEADLMLDLGFIEEVDQLLVRSKQDIQ CCCCEEEEECCHHHHHHHHCCCEEEEEEHHHEECCHHHHEEHHHHHHHHHHHHCCCCCCE LLVFSATIPQRLQHFFKKYIKNPLNVKINEHFSPEKMDHRLIRKKHRNEAEIIWEISQSI EEEEECHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCC HPYLALIFTNGKQQANELADQLLEYGLEVGVIHGGLTPRERKRVLKEIQNLRYQYVVATD CCEEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCEEEEEEEH LAARGIDIKGVSHVINAQIPKEESFYIHRVGRTARAGLEGTAISIYDDNDLSLIQRLEQK HHHCCCCCCCHHHHHCCCCCCCCCEEEEECCCHHHCCCCCCEEEEEECCCHHHHHHHHHC GLIFEFVEVKNGEWKTDPSWNERQRRQKVDTSIDKEAWKRVSKQKKVKPGYKKKQKRQQQ CCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH EIKKQLTKKKKK HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]