BacMap

Definition	Oceanobacillus iheyensis HTE831, complete genome.
Accession	NC_004193
Length	3,630,528

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The map label for this gene is yqjQ [H]

Identifier: 23099309

GI number: 23099309

Start: 1884055

End: 1884858

Strand: Reverse

Name: yqjQ [H]

Synonym: OB1854

Alternate gene names: 23099309

Gene position: 1884858-1884055 (Counterclockwise)

Preceding gene: 23099313

Following gene: 23099308

Centisome position: 51.92

GC content: 33.96

Gene sequence:

>804_bases
ATGAAGAATAACCAACGCATAGTGAATAAAAAAATAATTATTACTGGCGCTTCTAGTGGGATAGGAGAGATGTTAGCTAA
AAAGGTAGCAAGCCAAGGAGGGTTTCCTATTTTGGTTGCGCGCTCTCGTGATAAGCTCATAACTATTCAAAAAGAAATTG
ATCAATTATATAATCAAAGAAGTGCTATCTACCCAATTGACTTAACTGACAAAGATAATATAGACAACTTAATACCAGCC
ATTATCAATGATAATAAACAAATAGATGCATTAATTAATAATGCAGGTCTAGGAGTTTTTGACTCTATAGAAGATATGAA
TTATGATGACTTATTAGAAACGTTCCAATTAAACGTATTCGCTGGAATCCAATTATCACAAAGTATAATACCGTATCTTA
GAAAAACGAATGCAAACACTCAAATTGTAAATGTTATATCTCAGGCTGCCAAAATATCCACGCCAAAATCTGCGAGTTAT
GCATCATCAAAGCAAGCAATGCTAGGTTTTACAAACGTACTAAGAATGGAGTGTAGGATGTCATCGATTCATGTAATGGC
AGTAAATCTAGGTCCAGTAAGAACGAATTTTTTTGAACGGGCAGATAAAGATGGAACGTATAAACAAAATGTAGAGAAAT
ACATGTTAGACCCAGAACGAGTGGCAGATAAAATCGTTACACATTTATTTACGAGAAAACGTGAGATAAACATGCCTTGG
TGGATGGAAATAGGTAGTATCGTATATCGAATTATGCCAGGAACAATGGAGTCACTTTTAAGAAATCAATTTGATAAAAA
GTAG

Upstream 100 bases:

>100_bases
TTTGATTTTTGGGAAGAAGTCAATTAACAAGAATGTACACACTATGGATTTCACGGTACAATACATGATATACAAAGACA
TTCTATAAGAGGTTTTTACA

Downstream 100 bases:

>100_bases
TAGAGGTGCAAAATGAAATTAGAATTTACGAATCAGGCGAGAGAATTATTACAACAACAATATGAACAAGGGAAGAAATT
ATATTTATTTTATGATACGG

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MKNNQRIVNKKIIITGASSGIGEMLAKKVASQGGFPILVARSRDKLITIQKEIDQLYNQRSAIYPIDLTDKDNIDNLIPA
IINDNKQIDALINNAGLGVFDSIEDMNYDDLLETFQLNVFAGIQLSQSIIPYLRKTNANTQIVNVISQAAKISTPKSASY
ASSKQAMLGFTNVLRMECRMSSIHVMAVNLGPVRTNFFERADKDGTYKQNVEKYMLDPERVADKIVTHLFTRKREINMPW
WMEIGSIVYRIMPGTMESLLRNQFDKK

Sequences:

>Translated_267_residues
MKNNQRIVNKKIIITGASSGIGEMLAKKVASQGGFPILVARSRDKLITIQKEIDQLYNQRSAIYPIDLTDKDNIDNLIPA
IINDNKQIDALINNAGLGVFDSIEDMNYDDLLETFQLNVFAGIQLSQSIIPYLRKTNANTQIVNVISQAAKISTPKSASY
ASSKQAMLGFTNVLRMECRMSSIHVMAVNLGPVRTNFFERADKDGTYKQNVEKYMLDPERVADKIVTHLFTRKREINMPW
WMEIGSIVYRIMPGTMESLLRNQFDKK
>Mature_267_residues
MKNNQRIVNKKIIITGASSGIGEMLAKKVASQGGFPILVARSRDKLITIQKEIDQLYNQRSAIYPIDLTDKDNIDNLIPA
IINDNKQIDALINNAGLGVFDSIEDMNYDDLLETFQLNVFAGIQLSQSIIPYLRKTNANTQIVNVISQAAKISTPKSASY
ASSKQAMLGFTNVLRMECRMSSIHVMAVNLGPVRTNFFERADKDGTYKQNVEKYMLDPERVADKIVTHLFTRKREINMPW
WMEIGSIVYRIMPGTMESLLRNQFDKK

Specific function: Unknown

COG id: COG0300

COG function: function code R; Short-chain dehydrogenases of various substrate specificities

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI7706318, Length=196, Percent_Identity=32.1428571428571, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI4503817, Length=222, Percent_Identity=26.5765765765766, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI20149619, Length=269, Percent_Identity=25.2788104089219, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI109715829, Length=264, Percent_Identity=28.030303030303, Blast_Score=82, Evalue=3e-16,
Organism=Homo sapiens, GI40548397, Length=196, Percent_Identity=26.530612244898, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI214010158, Length=196, Percent_Identity=26.530612244898, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI214010156, Length=196, Percent_Identity=26.530612244898, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI22758144, Length=196, Percent_Identity=26.530612244898, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI142976729, Length=270, Percent_Identity=23.7037037037037, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI157739938, Length=243, Percent_Identity=23.8683127572016, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI4504503, Length=213, Percent_Identity=27.2300469483568, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI44680136, Length=191, Percent_Identity=23.0366492146597, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI44680133, Length=191, Percent_Identity=23.0366492146597, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI17738292, Length=191, Percent_Identity=23.0366492146597, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI7705925, Length=185, Percent_Identity=25.9459459459459, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI31542939, Length=237, Percent_Identity=24.0506329113924, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI32455239, Length=181, Percent_Identity=27.0718232044199, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI5031765, Length=181, Percent_Identity=27.0718232044199, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI7657478, Length=194, Percent_Identity=26.2886597938144, Blast_Score=66, Evalue=3e-11,
Organism=Escherichia coli, GI1786701, Length=269, Percent_Identity=27.1375464684015, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI87082100, Length=232, Percent_Identity=28.0172413793103, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1787905, Length=150, Percent_Identity=32.6666666666667, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI1787526, Length=195, Percent_Identity=29.7435897435897, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI1787335, Length=192, Percent_Identity=25.5208333333333, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1789378, Length=203, Percent_Identity=26.6009852216749, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1790717, Length=196, Percent_Identity=25.5102040816327, Blast_Score=61, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI71997402, Length=239, Percent_Identity=31.3807531380753, Blast_Score=101, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI17570069, Length=204, Percent_Identity=33.3333333333333, Blast_Score=99, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI17508895, Length=261, Percent_Identity=28.3524904214559, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17551412, Length=220, Percent_Identity=30.9090909090909, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17538480, Length=241, Percent_Identity=30.2904564315353, Blast_Score=78, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17560332, Length=202, Percent_Identity=30.1980198019802, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI72000259, Length=246, Percent_Identity=27.2357723577236, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17544670, Length=201, Percent_Identity=26.865671641791, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17560150, Length=241, Percent_Identity=28.2157676348548, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17563726, Length=249, Percent_Identity=30.5220883534137, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17562990, Length=238, Percent_Identity=29.4117647058824, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17562904, Length=199, Percent_Identity=29.6482412060301, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI115534694, Length=217, Percent_Identity=29.4930875576037, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17538486, Length=203, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17561402, Length=227, Percent_Identity=25.1101321585903, Blast_Score=67, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=202, Percent_Identity=35.1485148514851, Blast_Score=97, Evalue=4e-21,
Organism=Drosophila melanogaster, GI21358495, Length=245, Percent_Identity=28.1632653061224, Blast_Score=98, Evalue=5e-21,
Organism=Drosophila melanogaster, GI28571526, Length=205, Percent_Identity=32.1951219512195, Blast_Score=85, Evalue=6e-17,
Organism=Drosophila melanogaster, GI21357041, Length=228, Percent_Identity=29.8245614035088, Blast_Score=84, Evalue=7e-17,
Organism=Drosophila melanogaster, GI24580925, Length=196, Percent_Identity=29.5918367346939, Blast_Score=84, Evalue=9e-17,
Organism=Drosophila melanogaster, GI23397609, Length=189, Percent_Identity=32.2751322751323, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24644339, Length=208, Percent_Identity=30.2884615384615, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI116007236, Length=202, Percent_Identity=27.2277227722772, Blast_Score=74, Evalue=7e-14,
Organism=Drosophila melanogaster, GI116007238, Length=182, Percent_Identity=28.021978021978, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI21356301, Length=235, Percent_Identity=25.531914893617, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI281364892, Length=279, Percent_Identity=24.0143369175627, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI161076933, Length=195, Percent_Identity=30.2564102564103, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24643142, Length=183, Percent_Identity=29.5081967213115, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24584748, Length=195, Percent_Identity=30.2564102564103, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24584744, Length=267, Percent_Identity=24.7191011235955, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI28574402, Length=269, Percent_Identity=26.0223048327138, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24584752, Length=190, Percent_Identity=30.5263157894737, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24649181, Length=278, Percent_Identity=23.021582733813, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 30211; Mature: 30211

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNNQRIVNKKIIITGASSGIGEMLAKKVASQGGFPILVARSRDKLITIQKEIDQLYNQR
CCCCCEEECEEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCEEEHHHHHHHHHCCC
SAIYPIDLTDKDNIDNLIPAIINDNKQIDALINNAGLGVFDSIEDMNYDDLLETFQLNVF
CCEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCHHHCHHCCCHHHHHHHHHHHHE
AGIQLSQSIIPYLRKTNANTQIVNVISQAAKISTPKSASYASSKQAMLGFTNVLRMECRM
ECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHCCHHHHHHHHHHHHHHHHH
SSIHVMAVNLGPVRTNFFERADKDGTYKQNVEKYMLDPERVADKIVTHLFTRKREINMPW
CCEEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCH
WMEIGSIVYRIMPGTMESLLRNQFDKK
HHHHHHHHHHHCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MKNNQRIVNKKIIITGASSGIGEMLAKKVASQGGFPILVARSRDKLITIQKEIDQLYNQR
CCCCCEEECEEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCEEEHHHHHHHHHCCC
SAIYPIDLTDKDNIDNLIPAIINDNKQIDALINNAGLGVFDSIEDMNYDDLLETFQLNVF
CCEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCHHHCHHCCCHHHHHHHHHHHHE
AGIQLSQSIIPYLRKTNANTQIVNVISQAAKISTPKSASYASSKQAMLGFTNVLRMECRM
ECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHCCHHHHHHHHHHHHHHHHH
SSIHVMAVNLGPVRTNFFERADKDGTYKQNVEKYMLDPERVADKIVTHLFTRKREINMPW
CCEEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCH
WMEIGSIVYRIMPGTMESLLRNQFDKK
HHHHHHHHHHHCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]