| Definition | Oceanobacillus iheyensis HTE831, complete genome. |
|---|---|
| Accession | NC_004193 |
| Length | 3,630,528 |
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The map label for this gene is ppiB [H]
Identifier: 23099287
GI number: 23099287
Start: 1865660
End: 1866091
Strand: Reverse
Name: ppiB [H]
Synonym: OB1832
Alternate gene names: 23099287
Gene position: 1866091-1865660 (Counterclockwise)
Preceding gene: 23099288
Following gene: 23099286
Centisome position: 51.4
GC content: 37.73
Gene sequence:
>432_bases ATGAAAACAGGATATGTTTTAATGGAAAATGGAAATAAAATTGAATTCGAACTTTATCCAGAAGAGGCACCTAGCACTGT TGCTAATTTTGAAAAACTTGCTTCTGATCAATTCTACGATGGTCTTACTTTTCACCGAGTGATTCCAGGGTTTGTAAGTC AAGGAGGTTGTCCTGTAGGAAACGGTACTGGTTCTGCTGGATATACGATAAAGTGTGAAACGGAAGGTAATCCACATAAA CATGAAGAGGGTTCTTTATCGATGGCACACGCTGGTAAAGATACTGGAAGCAGTCAATTTTTCATTGTTCATGAGCCTCA ACCTCATCTTGATGGTGTTCATACCGTATTTGGTAAAGTTACATCAGGAATTGAACATGCAAAAGCAATGCGTAATGGCG ATACAATGAAAGAAATTCGTATCAATTCTTAA
Upstream 100 bases:
>100_bases TTCGTAATGATTTATCCTATGAATAAGAAGTTCTTTATTTATATATTTGACAAGAAGTGATAAAATAGGTGAGAATCTAT GATATAAGGAGTTAATAACT
Downstream 100 bases:
>100_bases TCGGCTTTAATAATGAACCTAATAGATATCGTTGTCTTTTTGTTTATTATTGCTCCGATTATTACCCTGATTCATGAAAT TGGTCATGTTTCAGGGTCCT
Product: peptidyl-prolyl cis-trans isomerase B
Products: NA
Alternate protein names: PPIase B; Rotamase B [H]
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MKTGYVLMENGNKIEFELYPEEAPSTVANFEKLASDQFYDGLTFHRVIPGFVSQGGCPVGNGTGSAGYTIKCETEGNPHK HEEGSLSMAHAGKDTGSSQFFIVHEPQPHLDGVHTVFGKVTSGIEHAKAMRNGDTMKEIRINS
Sequences:
>Translated_143_residues MKTGYVLMENGNKIEFELYPEEAPSTVANFEKLASDQFYDGLTFHRVIPGFVSQGGCPVGNGTGSAGYTIKCETEGNPHK HEEGSLSMAHAGKDTGSSQFFIVHEPQPHLDGVHTVFGKVTSGIEHAKAMRNGDTMKEIRINS >Mature_143_residues MKTGYVLMENGNKIEFELYPEEAPSTVANFEKLASDQFYDGLTFHRVIPGFVSQGGCPVGNGTGSAGYTIKCETEGNPHK HEEGSLSMAHAGKDTGSSQFFIVHEPQPHLDGVHTVFGKVTSGIEHAKAMRNGDTMKEIRINS
Specific function: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides [H]
COG id: COG0652
COG function: function code O; Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PPIase cyclophilin-type domain [H]
Homologues:
Organism=Homo sapiens, GI7706339, Length=114, Percent_Identity=46.4912280701754, Blast_Score=95, Evalue=2e-20, Organism=Homo sapiens, GI10863927, Length=140, Percent_Identity=44.2857142857143, Blast_Score=92, Evalue=2e-19, Organism=Homo sapiens, GI24308049, Length=122, Percent_Identity=42.6229508196721, Blast_Score=91, Evalue=3e-19, Organism=Homo sapiens, GI19557636, Length=115, Percent_Identity=44.3478260869565, Blast_Score=89, Evalue=1e-18, Organism=Homo sapiens, GI310127646, Length=139, Percent_Identity=41.726618705036, Blast_Score=89, Evalue=2e-18, Organism=Homo sapiens, GI310114371, Length=139, Percent_Identity=41.726618705036, Blast_Score=89, Evalue=2e-18, Organism=Homo sapiens, GI310119221, Length=139, Percent_Identity=41.726618705036, Blast_Score=89, Evalue=2e-18, Organism=Homo sapiens, GI4826932, Length=139, Percent_Identity=40.2877697841727, Blast_Score=89, Evalue=2e-18, Organism=Homo sapiens, GI310129267, Length=137, Percent_Identity=42.3357664233577, Blast_Score=84, Evalue=4e-17, Organism=Homo sapiens, GI310120620, Length=137, Percent_Identity=42.3357664233577, Blast_Score=84, Evalue=4e-17, Organism=Homo sapiens, GI64276486, Length=122, Percent_Identity=39.344262295082, Blast_Score=84, Evalue=5e-17, Organism=Homo sapiens, GI256017253, Length=140, Percent_Identity=40, Blast_Score=81, Evalue=2e-16, Organism=Homo sapiens, GI221139811, Length=140, Percent_Identity=40, Blast_Score=81, Evalue=2e-16, Organism=Homo sapiens, GI256017251, Length=140, Percent_Identity=40, Blast_Score=81, Evalue=2e-16, Organism=Homo sapiens, GI209417936, Length=140, Percent_Identity=40, Blast_Score=80, Evalue=4e-16, Organism=Homo sapiens, GI30102944, Length=140, Percent_Identity=40, Blast_Score=80, Evalue=4e-16, Organism=Homo sapiens, GI219842199, Length=140, Percent_Identity=40, Blast_Score=80, Evalue=4e-16, Organism=Homo sapiens, GI178057341, Length=140, Percent_Identity=40, Blast_Score=80, Evalue=5e-16, Organism=Homo sapiens, GI42560244, Length=138, Percent_Identity=39.8550724637681, Blast_Score=80, Evalue=6e-16, Organism=Homo sapiens, GI6631100, Length=137, Percent_Identity=41.6058394160584, Blast_Score=79, Evalue=9e-16, Organism=Homo sapiens, GI310110104, Length=137, Percent_Identity=40.8759124087591, Blast_Score=79, Evalue=1e-15, Organism=Homo sapiens, GI169164185, Length=139, Percent_Identity=40.2877697841727, Blast_Score=79, Evalue=2e-15, Organism=Homo sapiens, GI169163623, Length=139, Percent_Identity=40.2877697841727, Blast_Score=79, Evalue=2e-15, Organism=Homo sapiens, GI22547212, Length=159, Percent_Identity=37.7358490566038, Blast_Score=78, Evalue=3e-15, Organism=Homo sapiens, GI7657473, Length=159, Percent_Identity=37.7358490566038, Blast_Score=78, Evalue=3e-15, Organism=Homo sapiens, GI22547215, Length=159, Percent_Identity=37.7358490566038, Blast_Score=77, Evalue=3e-15, Organism=Homo sapiens, GI169163387, Length=139, Percent_Identity=40.2877697841727, Blast_Score=77, Evalue=3e-15, Organism=Homo sapiens, GI310127745, Length=137, Percent_Identity=42.3357664233577, Blast_Score=77, Evalue=4e-15, Organism=Homo sapiens, GI310119290, Length=137, Percent_Identity=42.3357664233577, Blast_Score=77, Evalue=4e-15, Organism=Homo sapiens, GI4758950, Length=133, Percent_Identity=40.6015037593985, Blast_Score=77, Evalue=5e-15, Organism=Homo sapiens, GI310114540, Length=137, Percent_Identity=42.3357664233577, Blast_Score=77, Evalue=5e-15, Organism=Homo sapiens, GI310132444, Length=139, Percent_Identity=40.2877697841727, Blast_Score=77, Evalue=7e-15, Organism=Homo sapiens, GI310113152, Length=139, Percent_Identity=40.2877697841727, Blast_Score=77, Evalue=7e-15, Organism=Homo sapiens, GI239751853, Length=139, Percent_Identity=38.8489208633094, Blast_Score=75, Evalue=2e-14, Organism=Homo sapiens, GI113428306, Length=139, Percent_Identity=38.8489208633094, Blast_Score=75, Evalue=2e-14, Organism=Homo sapiens, GI169214050, Length=139, Percent_Identity=38.8489208633094, Blast_Score=75, Evalue=2e-14, Organism=Homo sapiens, GI5031987, Length=140, Percent_Identity=39.2857142857143, Blast_Score=74, Evalue=5e-14, Organism=Homo sapiens, GI4505991, Length=119, Percent_Identity=43.6974789915966, Blast_Score=74, Evalue=6e-14, Organism=Homo sapiens, GI5454154, Length=131, Percent_Identity=37.4045801526718, Blast_Score=73, Evalue=7e-14, Organism=Homo sapiens, GI45439316, Length=149, Percent_Identity=36.9127516778523, Blast_Score=72, Evalue=2e-13, Organism=Homo sapiens, GI303305009, Length=131, Percent_Identity=38.9312977099237, Blast_Score=72, Evalue=2e-13, Organism=Homo sapiens, GI5174637, Length=131, Percent_Identity=38.9312977099237, Blast_Score=72, Evalue=2e-13, Organism=Homo sapiens, GI150418007, Length=125, Percent_Identity=38.4, Blast_Score=69, Evalue=1e-12, Organism=Homo sapiens, GI20911035, Length=155, Percent_Identity=34.8387096774194, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1789763, Length=140, Percent_Identity=36.4285714285714, Blast_Score=69, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17539496, Length=135, Percent_Identity=45.1851851851852, Blast_Score=102, Evalue=5e-23, Organism=Caenorhabditis elegans, GI17551282, Length=140, Percent_Identity=42.1428571428571, Blast_Score=90, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17551284, Length=140, Percent_Identity=42.1428571428571, Blast_Score=90, Evalue=3e-19, Organism=Caenorhabditis elegans, GI71997782, Length=125, Percent_Identity=40.8, Blast_Score=87, Evalue=4e-18, Organism=Caenorhabditis elegans, GI71980594, Length=135, Percent_Identity=37.7777777777778, Blast_Score=80, Evalue=4e-16, Organism=Caenorhabditis elegans, GI71980590, Length=135, Percent_Identity=37.7777777777778, Blast_Score=80, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17506311, Length=141, Percent_Identity=39.0070921985816, Blast_Score=78, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17559074, Length=131, Percent_Identity=39.6946564885496, Blast_Score=77, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17506307, Length=142, Percent_Identity=40.1408450704225, Blast_Score=77, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17552780, Length=124, Percent_Identity=42.741935483871, Blast_Score=77, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17552782, Length=138, Percent_Identity=36.9565217391304, Blast_Score=75, Evalue=8e-15, Organism=Caenorhabditis elegans, GI17565860, Length=151, Percent_Identity=37.0860927152318, Blast_Score=75, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17532641, Length=127, Percent_Identity=36.2204724409449, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17539498, Length=118, Percent_Identity=40.6779661016949, Blast_Score=73, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17566266, Length=126, Percent_Identity=39.6825396825397, Blast_Score=72, Evalue=9e-14, Organism=Caenorhabditis elegans, GI17532643, Length=131, Percent_Identity=38.1679389312977, Blast_Score=72, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17552784, Length=126, Percent_Identity=35.7142857142857, Blast_Score=69, Evalue=7e-13, Organism=Saccharomyces cerevisiae, GI6323562, Length=124, Percent_Identity=45.9677419354839, Blast_Score=93, Evalue=1e-20, Organism=Saccharomyces cerevisiae, GI6320359, Length=126, Percent_Identity=42.0634920634921, Blast_Score=82, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6321848, Length=148, Percent_Identity=40.5405405405405, Blast_Score=82, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6323246, Length=141, Percent_Identity=39.7163120567376, Blast_Score=76, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6320510, Length=131, Percent_Identity=40.4580152671756, Blast_Score=73, Evalue=1e-14, Organism=Drosophila melanogaster, GI17986117, Length=131, Percent_Identity=41.9847328244275, Blast_Score=97, Evalue=4e-21, Organism=Drosophila melanogaster, GI19922376, Length=135, Percent_Identity=39.2592592592593, Blast_Score=92, Evalue=8e-20, Organism=Drosophila melanogaster, GI20130249, Length=133, Percent_Identity=42.8571428571429, Blast_Score=87, Evalue=3e-18, Organism=Drosophila melanogaster, GI24650807, Length=132, Percent_Identity=40.9090909090909, Blast_Score=86, Evalue=1e-17, Organism=Drosophila melanogaster, GI21357249, Length=123, Percent_Identity=37.3983739837398, Blast_Score=82, Evalue=9e-17, Organism=Drosophila melanogaster, GI45549139, Length=141, Percent_Identity=38.2978723404255, Blast_Score=75, Evalue=1e-14, Organism=Drosophila melanogaster, GI17647301, Length=125, Percent_Identity=40, Blast_Score=75, Evalue=2e-14, Organism=Drosophila melanogaster, GI24586038, Length=133, Percent_Identity=37.593984962406, Blast_Score=74, Evalue=2e-14, Organism=Drosophila melanogaster, GI24664125, Length=141, Percent_Identity=38.2978723404255, Blast_Score=74, Evalue=2e-14, Organism=Drosophila melanogaster, GI21357783, Length=141, Percent_Identity=38.2978723404255, Blast_Score=74, Evalue=2e-14, Organism=Drosophila melanogaster, GI24652460, Length=115, Percent_Identity=33.9130434782609, Blast_Score=74, Evalue=4e-14, Organism=Drosophila melanogaster, GI19922912, Length=123, Percent_Identity=43.0894308943089, Blast_Score=72, Evalue=9e-14, Organism=Drosophila melanogaster, GI17136360, Length=132, Percent_Identity=38.6363636363636, Blast_Score=70, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015891 - InterPro: IPR020892 - InterPro: IPR002130 [H]
Pfam domain/function: PF00160 Pro_isomerase [H]
EC number: =5.2.1.8 [H]
Molecular weight: Translated: 15515; Mature: 15515
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: PS00170 CSA_PPIASE_1 ; PS50072 CSA_PPIASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTGYVLMENGNKIEFELYPEEAPSTVANFEKLASDQFYDGLTFHRVIPGFVSQGGCPVG CCCCEEEEECCCEEEEEECCCCCCHHHHHHHHHHCCHHCCCEEHHHHHHHHHCCCCCCCC NGTGSAGYTIKCETEGNPHKHEEGSLSMAHAGKDTGSSQFFIVHEPQPHLDGVHTVFGKV CCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHH TSGIEHAKAMRNGDTMKEIRINS HHHHHHHHHHHCCCCEEEEEECC >Mature Secondary Structure MKTGYVLMENGNKIEFELYPEEAPSTVANFEKLASDQFYDGLTFHRVIPGFVSQGGCPVG CCCCEEEEECCCEEEEEECCCCCCHHHHHHHHHHCCHHCCCEEHHHHHHHHHCCCCCCCC NGTGSAGYTIKCETEGNPHKHEEGSLSMAHAGKDTGSSQFFIVHEPQPHLDGVHTVFGKV CCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHH TSGIEHAKAMRNGDTMKEIRINS HHHHHHHHHHHCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7934829; 8022278; 9384377; 8755892 [H]