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The map label for this gene is ypjH [H]

Identifier: 23099221

GI number: 23099221

Start: 1806733

End: 1807863

Strand: Reverse

Name: ypjH [H]

Synonym: OB1766

Alternate gene names: 23099221

Gene position: 1807863-1806733 (Counterclockwise)

Preceding gene: 23099222

Following gene: 23099220

Centisome position: 49.8

GC content: 35.01

Gene sequence:

>1131_bases
GTGAAGAAGATAGGCATCACTTGTTATCCGACTGTCGGAGGGTCAGGTGTAATTGCTACAGAGCTAGGTAAACTATTAGC
TGAAAAGGGACATGAAATACATTTTATTACTTCAAGCGTTCCTTTTCGCTTAGATAAAGTATATCCGAAAGTATATTATC
ATCAAGTAGAAATGAGCCATTATCCAGTCTTTCAATATCCACCATACGATCTAACACTTGCTGCTAAAATGGCAGAAGTG
ATCGACCGTGAAAAACTTGATATTTTGCATGTACATTATGCGATGCCTCATGCTATTTGTGCTATCTTAGCTAGAGATAT
AGCAAAACACCCTGTAAAAATCGTAACCACTCTCCATGGTACGGATATAACTGTATTGGCAATTGATAACGCATTTACAT
CTATCATTCGTCATGGAATTGAACACTCAGACGCTGTTACTGCAGTGTCTAATAGCTTAGTTCAACAAACAAATGAAATG
TTAGATATAGAAAAACCAATAGAAGTTATCCATAATTTTATAAATGAACAACAGTATTATCCAAAAAAGATACACAATTT
GAAGTATCAATTTGGAATAGAAGAGGACACAAAAGTACTCATTCATATTTCTAATTTTCGAAAGGTCAAACGAGTACAAG
ACGTCATTTATACATTCGAAGAAGTACAAAAGGATGTTAAGAGTCAATTGTTACTCATTGGCGATGGCCCTGAGTATGGA
GATATGCTTCGTTTAGTGGATGAACTTGGATTACAAGATAAAGTACAATTCCTAGGGAAGCAGAATAATATCAGTGATAT
ATTATCCATGGCAGATCTTATGTTATTAATGTCTGAAAAAGAAAGCTTTGGGTTAGTATTATTAGAAGGAATGGCTTGTG
GCGTACCTAGTATCGGAACAAACATTGGTGGCATTCCAGAAGTACTGAAGCATGAAGAAACTGGATATATCGTTAACTTA
GGAGATAGTTATAATGCAGCTAAATATGCCATAGATCTATTAACCGATGATGAAAAGTGGCAAATGTTTTCCGATAATTC
CTTGCAGCATGTAAGAGATTACTTTGCTTCGAAGACGATTGTAAATCAATATGAGGCCTTATATGATACACTTTTACAGG
AAAACAATTAA

Upstream 100 bases:

>100_bases
CGAATATTGCAGGTGCAGAGATCTTTATTCATGGCCTTAGCAGAGGAGATTTGAAATGGAGAGAGATAATCAAAGAGAGA
CAAGAGAAAGAAGGGACACC

Downstream 100 bases:

>100_bases
GTTGGAGGTGGGAATGTGATATCTGAACCTTTTTTAAAAGCTTCACCAATACTAACGACTTTAATTTCAAATGGCTATGA
AGGGTATTTTGTAGGTGGAT

Product: lipopolysaccharide biosynthesis

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MKKIGITCYPTVGGSGVIATELGKLLAEKGHEIHFITSSVPFRLDKVYPKVYYHQVEMSHYPVFQYPPYDLTLAAKMAEV
IDREKLDILHVHYAMPHAICAILARDIAKHPVKIVTTLHGTDITVLAIDNAFTSIIRHGIEHSDAVTAVSNSLVQQTNEM
LDIEKPIEVIHNFINEQQYYPKKIHNLKYQFGIEEDTKVLIHISNFRKVKRVQDVIYTFEEVQKDVKSQLLLIGDGPEYG
DMLRLVDELGLQDKVQFLGKQNNISDILSMADLMLLMSEKESFGLVLLEGMACGVPSIGTNIGGIPEVLKHEETGYIVNL
GDSYNAAKYAIDLLTDDEKWQMFSDNSLQHVRDYFASKTIVNQYEALYDTLLQENN

Sequences:

>Translated_376_residues
MKKIGITCYPTVGGSGVIATELGKLLAEKGHEIHFITSSVPFRLDKVYPKVYYHQVEMSHYPVFQYPPYDLTLAAKMAEV
IDREKLDILHVHYAMPHAICAILARDIAKHPVKIVTTLHGTDITVLAIDNAFTSIIRHGIEHSDAVTAVSNSLVQQTNEM
LDIEKPIEVIHNFINEQQYYPKKIHNLKYQFGIEEDTKVLIHISNFRKVKRVQDVIYTFEEVQKDVKSQLLLIGDGPEYG
DMLRLVDELGLQDKVQFLGKQNNISDILSMADLMLLMSEKESFGLVLLEGMACGVPSIGTNIGGIPEVLKHEETGYIVNL
GDSYNAAKYAIDLLTDDEKWQMFSDNSLQHVRDYFASKTIVNQYEALYDTLLQENN
>Mature_376_residues
MKKIGITCYPTVGGSGVIATELGKLLAEKGHEIHFITSSVPFRLDKVYPKVYYHQVEMSHYPVFQYPPYDLTLAAKMAEV
IDREKLDILHVHYAMPHAICAILARDIAKHPVKIVTTLHGTDITVLAIDNAFTSIIRHGIEHSDAVTAVSNSLVQQTNEM
LDIEKPIEVIHNFINEQQYYPKKIHNLKYQFGIEEDTKVLIHISNFRKVKRVQDVIYTFEEVQKDVKSQLLLIGDGPEYG
DMLRLVDELGLQDKVQFLGKQNNISDILSMADLMLLMSEKESFGLVLLEGMACGVPSIGTNIGGIPEVLKHEETGYIVNL
GDSYNAAKYAIDLLTDDEKWQMFSDNSLQHVRDYFASKTIVNQYEALYDTLLQENN

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Escherichia coli, GI1788357, Length=262, Percent_Identity=22.1374045801527, Blast_Score=66, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI9755344, Length=354, Percent_Identity=25.7062146892655, Blast_Score=77, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 42545; Mature: 42545

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIGITCYPTVGGSGVIATELGKLLAEKGHEIHFITSSVPFRLDKVYPKVYYHQVEMSH
CCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHEEEECCC
YPVFQYPPYDLTLAAKMAEVIDREKLDILHVHYAMPHAICAILARDIAKHPVKIVTTLHG
CCEEECCCCCHHHHHHHHHHHCCCCHHEEEEHHHHHHHHHHHHHHHHHHCCEEEEEEECC
TDITVLAIDNAFTSIIRHGIEHSDAVTAVSNSLVQQTNEMLDIEKPIEVIHNFINEQQYY
CCEEEEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCC
PKKIHNLKYQFGIEEDTKVLIHISNFRKVKRVQDVIYTFEEVQKDVKSQLLLIGDGPEYG
HHHHHCCEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHH
DMLRLVDELGLQDKVQFLGKQNNISDILSMADLMLLMSEKESFGLVLLEGMACGVPSIGT
HHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCC
NIGGIPEVLKHEETGYIVNLGDSYNAAKYAIDLLTDDEKWQMFSDNSLQHVRDYFASKTI
CCCCCHHHHCCCCCCEEEECCCCCCCHHEEEEEECCCCHHEEECCCCHHHHHHHHHHHHH
VNQYEALYDTLLQENN
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKIGITCYPTVGGSGVIATELGKLLAEKGHEIHFITSSVPFRLDKVYPKVYYHQVEMSH
CCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHEEEECCC
YPVFQYPPYDLTLAAKMAEVIDREKLDILHVHYAMPHAICAILARDIAKHPVKIVTTLHG
CCEEECCCCCHHHHHHHHHHHCCCCHHEEEEHHHHHHHHHHHHHHHHHHCCEEEEEEECC
TDITVLAIDNAFTSIIRHGIEHSDAVTAVSNSLVQQTNEMLDIEKPIEVIHNFINEQQYY
CCEEEEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCC
PKKIHNLKYQFGIEEDTKVLIHISNFRKVKRVQDVIYTFEEVQKDVKSQLLLIGDGPEYG
HHHHHCCEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHH
DMLRLVDELGLQDKVQFLGKQNNISDILSMADLMLLMSEKESFGLVLLEGMACGVPSIGT
HHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCC
NIGGIPEVLKHEETGYIVNLGDSYNAAKYAIDLLTDDEKWQMFSDNSLQHVRDYFASKTI
CCCCCHHHHCCCCCCEEEECCCCCCCHHEEEEEECCCCHHEEECCCCHHHHHHHHHHHHH
VNQYEALYDTLLQENN
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]