| Definition | Oceanobacillus iheyensis HTE831, complete genome. |
|---|---|
| Accession | NC_004193 |
| Length | 3,630,528 |
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The map label for this gene is 23099038
Identifier: 23099038
GI number: 23099038
Start: 1620248
End: 1621612
Strand: Direct
Name: 23099038
Synonym: OB1583
Alternate gene names: NA
Gene position: 1620248-1621612 (Clockwise)
Preceding gene: 23099037
Following gene: 23099039
Centisome position: 44.63
GC content: 34.36
Gene sequence:
>1365_bases ATGAAAGTAGATAATCCGTGGAGAATTTATACGAGTAAAGACAAAATGGCAGCCTATATAGAAATAGAGAAAGAGGCATT TCTAGAAGAAGATGCAGTGTTAATTCACGAATCAATTGAAAAACAACTTCATGATCAAGGAATAGTACATGGTATCAAGG ACAGTAAACTGACTAGCATCGATTTATCCGTTAATGAACCTATTCTAATTGCAGAAGGTAAAAAACCAATAAATGGTGAG GATGGGAGATTGGAAATTCTTGCTAATCTAGACACTTCTATTAATAGAAGGGACCATTGGGATTATCGAGAAGTTATGCG AATACCTAATGTGACAAAAGGTCAACTGCTTGCCAAATTAATCCTACCTAAACAAGGCATAGATGGACTAGATGTTACCG GAAGAGTTCTAAAAGCAAAAGATGGAAAACCCAAAAAGGTACGAGCTGGTAAAAATGTGGTTTGGAAAGAAGATGTCCAT TCTTTTTTTGCCGCTAGTGATGGGCAAATTAGTATAAATAATCAGCAAATTCAAGTATTACCTGTATTTAAGGTAAATGA ATCTATATCCATGAAGACGGGGAATTTGGATTTTGTCGGTAATATTGAAATACATGGAGATGTACCTTCTGGCTTTGAGA TGAAGGCTGAAGGAGATATACGTATACATGGCGTGGTTGAAGGTGCAAAAATAATAGCTGGTGGATCTGTCTTTATTATG GAAGGAATAGCCGGAAAAAATATTGGGAGTATCCAGGCTGGCAATGATATTATCCTTGGTTATTGTAATCATTCCTTTAT TCAGGCGGGGAATGATCTATATGTAGAAAAGTCCATTCTTCATAGTGATTGTACAGTAATTGGACATGTGTATTGTAAAT TAGGGAATATAATAGGTGGATCGGTATCTGCAGGGAAAACAATGGAAGCGAAAGACATCGGAAATCGATTAGGAATAAAA ACGGAAATTGCATTTGGAATTAACAAGAATGAATACGAAAAGGAAAAACAATTAATTTATCAAAAGAACAAGTTAGAAGA AGATGCTAAGAAAATAAAGAGTCTTGGGCAGCGATTACGTAATGGAAGTGCAGAAAATAATCAGAAGTTGCGTTTATCAT TGTTACGCCAACGCAATTTATTAAAACAAACAGAGGAAGAGATCCATTTAATTGATCAATCTTTACTCGTAATTCAATCG ACGATTGGTTCTGAACATGAAGCGTCTTTAATCGTCCGTAACTTTATTCATCCTAATGTCATTATTTCTTTTGGAAAGTA TAAGAGAATTATTAAAAGTGCGCATCACTTTGTTAAAATAAAAGTATCAAAGAATGAAATTGATATTATTCCTTTATTTG AATAG
Upstream 100 bases:
>100_bases TCTCAAATTCACAAACGATCTATCTTTAAATTGAAAAAAACGTTAGAAAAAGTCCAAGCCATGTAGTTGCTTGTACATAA GCGATAAAGGGGTAAGAGGG
Downstream 100 bases:
>100_bases CTAGGGAGATGCTTGTATGAGTTGGAAATCAATTGAAATGCAGGTAGCGTTACCGCGAGTCCAAGATGCAGGGAAATTAC AAAATCAAATCGATAAACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 454; Mature: 454
Protein sequence:
>454_residues MKVDNPWRIYTSKDKMAAYIEIEKEAFLEEDAVLIHESIEKQLHDQGIVHGIKDSKLTSIDLSVNEPILIAEGKKPINGE DGRLEILANLDTSINRRDHWDYREVMRIPNVTKGQLLAKLILPKQGIDGLDVTGRVLKAKDGKPKKVRAGKNVVWKEDVH SFFAASDGQISINNQQIQVLPVFKVNESISMKTGNLDFVGNIEIHGDVPSGFEMKAEGDIRIHGVVEGAKIIAGGSVFIM EGIAGKNIGSIQAGNDIILGYCNHSFIQAGNDLYVEKSILHSDCTVIGHVYCKLGNIIGGSVSAGKTMEAKDIGNRLGIK TEIAFGINKNEYEKEKQLIYQKNKLEEDAKKIKSLGQRLRNGSAENNQKLRLSLLRQRNLLKQTEEEIHLIDQSLLVIQS TIGSEHEASLIVRNFIHPNVIISFGKYKRIIKSAHHFVKIKVSKNEIDIIPLFE
Sequences:
>Translated_454_residues MKVDNPWRIYTSKDKMAAYIEIEKEAFLEEDAVLIHESIEKQLHDQGIVHGIKDSKLTSIDLSVNEPILIAEGKKPINGE DGRLEILANLDTSINRRDHWDYREVMRIPNVTKGQLLAKLILPKQGIDGLDVTGRVLKAKDGKPKKVRAGKNVVWKEDVH SFFAASDGQISINNQQIQVLPVFKVNESISMKTGNLDFVGNIEIHGDVPSGFEMKAEGDIRIHGVVEGAKIIAGGSVFIM EGIAGKNIGSIQAGNDIILGYCNHSFIQAGNDLYVEKSILHSDCTVIGHVYCKLGNIIGGSVSAGKTMEAKDIGNRLGIK TEIAFGINKNEYEKEKQLIYQKNKLEEDAKKIKSLGQRLRNGSAENNQKLRLSLLRQRNLLKQTEEEIHLIDQSLLVIQS TIGSEHEASLIVRNFIHPNVIISFGKYKRIIKSAHHFVKIKVSKNEIDIIPLFE >Mature_454_residues MKVDNPWRIYTSKDKMAAYIEIEKEAFLEEDAVLIHESIEKQLHDQGIVHGIKDSKLTSIDLSVNEPILIAEGKKPINGE DGRLEILANLDTSINRRDHWDYREVMRIPNVTKGQLLAKLILPKQGIDGLDVTGRVLKAKDGKPKKVRAGKNVVWKEDVH SFFAASDGQISINNQQIQVLPVFKVNESISMKTGNLDFVGNIEIHGDVPSGFEMKAEGDIRIHGVVEGAKIIAGGSVFIM EGIAGKNIGSIQAGNDIILGYCNHSFIQAGNDLYVEKSILHSDCTVIGHVYCKLGNIIGGSVSAGKTMEAKDIGNRLGIK TEIAFGINKNEYEKEKQLIYQKNKLEEDAKKIKSLGQRLRNGSAENNQKLRLSLLRQRNLLKQTEEEIHLIDQSLLVIQS TIGSEHEASLIVRNFIHPNVIISFGKYKRIIKSAHHFVKIKVSKNEIDIIPLFE
Specific function: Unknown
COG id: COG1315
COG function: function code L; Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50616; Mature: 50616
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVDNPWRIYTSKDKMAAYIEIEKEAFLEEDAVLIHESIEKQLHDQGIVHGIKDSKLTSI CCCCCCEEEEECCCCEEEEEEEEHHHHHCCCHHHHHHHHHHHHHHCCCEECCCCCCEEEE DLSVNEPILIAEGKKPINGEDGRLEILANLDTSINRRDHWDYREVMRIPNVTKGQLLAKL EEECCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHCCCCCHHHHHHHH ILPKQGIDGLDVTGRVLKAKDGKPKKVRAGKNVVWKEDVHSFFAASDGQISINNQQIQVL HCCCCCCCCCCCCCEEEECCCCCCCEEECCCCCEEHHHHHHHHCCCCCEEEECCCEEEEE PVFKVNESISMKTGNLDFVGNIEIHGDVPSGFEMKAEGDIRIHGVVEGAKIIAGGSVFIM EEEEECCCEEEECCCEEEEEEEEEECCCCCCCEEECCCCEEEEEEECCCEEEECCCEEEE EGIAGKNIGSIQAGNDIILGYCNHSFIQAGNDLYVEKSILHSDCTVIGHVYCKLGNIIGG ECCCCCCCCCEECCCCEEEEECCCHHHHCCCCEEEEHHHHHCCHHHHHHHHHHHCCCCCC SVSAGKTMEAKDIGNRLGIKTEIAFGINKNEYEKEKQLIYQKNKLEEDAKKIKSLGQRLR CCCCCCEEEHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NGSAENNQKLRLSLLRQRNLLKQTEEEIHLIDQSLLVIQSTIGSEHEASLIVRNFIHPNV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCE IISFGKYKRIIKSAHHFVKIKVSKNEIDIIPLFE EEECHHHHHHHHCCCEEEEEEEECCCEEEEECCC >Mature Secondary Structure MKVDNPWRIYTSKDKMAAYIEIEKEAFLEEDAVLIHESIEKQLHDQGIVHGIKDSKLTSI CCCCCCEEEEECCCCEEEEEEEEHHHHHCCCHHHHHHHHHHHHHHCCCEECCCCCCEEEE DLSVNEPILIAEGKKPINGEDGRLEILANLDTSINRRDHWDYREVMRIPNVTKGQLLAKL EEECCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHCCCCCHHHHHHHH ILPKQGIDGLDVTGRVLKAKDGKPKKVRAGKNVVWKEDVHSFFAASDGQISINNQQIQVL HCCCCCCCCCCCCCEEEECCCCCCCEEECCCCCEEHHHHHHHHCCCCCEEEECCCEEEEE PVFKVNESISMKTGNLDFVGNIEIHGDVPSGFEMKAEGDIRIHGVVEGAKIIAGGSVFIM EEEEECCCEEEECCCEEEEEEEEEECCCCCCCEEECCCCEEEEEEECCCEEEECCCEEEE EGIAGKNIGSIQAGNDIILGYCNHSFIQAGNDLYVEKSILHSDCTVIGHVYCKLGNIIGG ECCCCCCCCCEECCCCEEEEECCCHHHHCCCCEEEEHHHHHCCHHHHHHHHHHHCCCCCC SVSAGKTMEAKDIGNRLGIKTEIAFGINKNEYEKEKQLIYQKNKLEEDAKKIKSLGQRLR CCCCCCEEEHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NGSAENNQKLRLSLLRQRNLLKQTEEEIHLIDQSLLVIQSTIGSEHEASLIVRNFIHPNV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCE IISFGKYKRIIKSAHHFVKIKVSKNEIDIIPLFE EEECHHHHHHHHCCCEEEEEEEECCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA