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The map label for this gene is rpe [H]

Identifier: 23098966

GI number: 23098966

Start: 1555885

End: 1556541

Strand: Direct

Name: rpe [H]

Synonym: OB1511

Alternate gene names: 23098966

Gene position: 1555885-1556541 (Clockwise)

Preceding gene: 23098965

Following gene: 23098967

Centisome position: 42.86

GC content: 38.05

Gene sequence:

>657_bases
ATGACAAAAATAGCACCATCAATATTATCAGCAGATTTTGCAAAGCTAGGACAAGAAATAAAGGAAGTAGAAGAAGCGGG
TGCAGATTATATCCATGTTGATGTCATGGATGGGCATTTCGTCCCTAATATAACAATCGGTCCTTTAGTTGTCGAAGCGA
TTAGACCAATTACAGATTTACCTTTAGATGTTCACCTAATGATTGAAAATCCAGACGCATATATTCCTGCTTTTGCAGAA
GCAGGTGCATCTATTATCACGGTACATCAAGAAGCGTGTGTACATCTGCATCGAACTTTACAGTTAATCCGTTCACACGG
CGTGAAACCAGGGGTAGTTATTAATCCAGCAACACCTGTCGAAATGATTAAACCTATTCTTGCAGAAGTAGATCTTATCT
TAATAATGACTGTTAATCCTGGTTTTGGTGGGCAATCATTTATTCAAGAGACAACGTCAAAAATAAAACAATTAGCAGAT
TGGCGAGAAAAGTATAAACTATCCTATGAAATCGAAGTAGATGGCGGAGTGAATGAAAAGACAGCAGGGATATGTACGAC
TAGTGGTGCTGATGTATTAGTAGCTGGGAGTGCTATCTTTAATCATGAAAATCGAAAACAAGCCATTGAATTGCTAAGAG
AAAAGGCGAAAGTCTAA

Upstream 100 bases:

>100_bases
GTGAAAGAAGCTGTAGAAAACGAAGAAATTGCGGTTTTTCGTTACAATCATTATCTGCGTTTCTTAGAAGAAATACAGAC
AAGAAAGCCGAGGTATTAGA

Downstream 100 bases:

>100_bases
TGAAAACCATTGGAATTATTGGCAATGGTCCGAAAAATATGCTCCCTGATCTAAACCAATACCAATATGAAGTAGATTTT
TGGATAGGGGCAGATCGAGG

Product: ribulose-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MTKIAPSILSADFAKLGQEIKEVEEAGADYIHVDVMDGHFVPNITIGPLVVEAIRPITDLPLDVHLMIENPDAYIPAFAE
AGASIITVHQEACVHLHRTLQLIRSHGVKPGVVINPATPVEMIKPILAEVDLILIMTVNPGFGGQSFIQETTSKIKQLAD
WREKYKLSYEIEVDGGVNEKTAGICTTSGADVLVAGSAIFNHENRKQAIELLREKAKV

Sequences:

>Translated_218_residues
MTKIAPSILSADFAKLGQEIKEVEEAGADYIHVDVMDGHFVPNITIGPLVVEAIRPITDLPLDVHLMIENPDAYIPAFAE
AGASIITVHQEACVHLHRTLQLIRSHGVKPGVVINPATPVEMIKPILAEVDLILIMTVNPGFGGQSFIQETTSKIKQLAD
WREKYKLSYEIEVDGGVNEKTAGICTTSGADVLVAGSAIFNHENRKQAIELLREKAKV
>Mature_217_residues
TKIAPSILSADFAKLGQEIKEVEEAGADYIHVDVMDGHFVPNITIGPLVVEAIRPITDLPLDVHLMIENPDAYIPAFAEA
GASIITVHQEACVHLHRTLQLIRSHGVKPGVVINPATPVEMIKPILAEVDLILIMTVNPGFGGQSFIQETTSKIKQLADW
REKYKLSYEIEVDGGVNEKTAGICTTSGADVLVAGSAIFNHENRKQAIELLREKAKV

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=215, Percent_Identity=43.2558139534884, Blast_Score=179, Evalue=2e-45,
Organism=Homo sapiens, GI219879828, Length=214, Percent_Identity=41.588785046729, Blast_Score=168, Evalue=3e-42,
Organism=Homo sapiens, GI24307923, Length=168, Percent_Identity=35.1190476190476, Blast_Score=103, Evalue=1e-22,
Organism=Escherichia coli, GI1789788, Length=217, Percent_Identity=50.2304147465438, Blast_Score=218, Evalue=3e-58,
Organism=Escherichia coli, GI1790523, Length=213, Percent_Identity=44.131455399061, Blast_Score=187, Evalue=6e-49,
Organism=Escherichia coli, GI1790754, Length=204, Percent_Identity=31.3725490196078, Blast_Score=105, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17552948, Length=216, Percent_Identity=41.2037037037037, Blast_Score=158, Evalue=2e-39,
Organism=Saccharomyces cerevisiae, GI6322341, Length=225, Percent_Identity=39.1111111111111, Blast_Score=169, Evalue=4e-43,
Organism=Drosophila melanogaster, GI24586301, Length=213, Percent_Identity=40.8450704225352, Blast_Score=169, Evalue=9e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 23722; Mature: 23591

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: PS01085 RIBUL_P_3_EPIMER_1 ; PS01086 RIBUL_P_3_EPIMER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKIAPSILSADFAKLGQEIKEVEEAGADYIHVDVMDGHFVPNITIGPLVVEAIRPITDL
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCC
PLDVHLMIENPDAYIPAFAEAGASIITVHQEACVHLHRTLQLIRSHGVKPGVVINPATPV
CCEEEEEEECCCCCCCHHHHCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCH
EMIKPILAEVDLILIMTVNPGFGGQSFIQETTSKIKQLADWREKYKLSYEIEVDGGVNEK
HHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCC
TAGICTTSGADVLVAGSAIFNHENRKQAIELLREKAKV
CCCEEECCCCCEEEECHHHHCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
TKIAPSILSADFAKLGQEIKEVEEAGADYIHVDVMDGHFVPNITIGPLVVEAIRPITDL
CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCC
PLDVHLMIENPDAYIPAFAEAGASIITVHQEACVHLHRTLQLIRSHGVKPGVVINPATPV
CCEEEEEEECCCCCCCHHHHCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCH
EMIKPILAEVDLILIMTVNPGFGGQSFIQETTSKIKQLADWREKYKLSYEIEVDGGVNEK
HHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCC
TAGICTTSGADVLVAGSAIFNHENRKQAIELLREKAKV
CCCEEECCCCCEEEECHHHHCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]