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The map label for this gene is yvcA [H]

Identifier: 23098747

GI number: 23098747

Start: 1332877

End: 1333542

Strand: Reverse

Name: yvcA [H]

Synonym: OB1292

Alternate gene names: 23098747

Gene position: 1333542-1332877 (Counterclockwise)

Preceding gene: 23098748

Following gene: 23098746

Centisome position: 36.73

GC content: 31.98

Gene sequence:

>666_bases
ATGAAAAAATATATGTGGTTATTATTAGTTGTCTTATTTATTATAGGAGGTTGTGGTATGAATAATGATCCAGAAGAAAA
TGTGTCTCCTTCTGAAATGAATGCCGAAGACTTACCCGATGTTCCAGCCCTTCAAGATGAATTCACACGAAAATTTATAC
AGTCTACTAAGCCTGTTCGTGAAGGCTTCTACCCTTTCTTATCCAAGTCAAAGAGTTTTACGATGGACTTTCCTGAGGAT
ATGGTAATCAGTAACAGAACCCATAATATTGGACCAGATGATAGAAGTGAGACTATTACTTTTGCAGATGTTGATAAAAC
TAAAGAGATTTTTGTAAACTATAGTTTACGCTATTTCAAAGGAGAGCCTAATGTTGAGTATACTATGATTCGCATGACAG
AAAGTCATGATCGAGAGTTAGAATTTAGAGATATTGAAACGGACAATAATTCAAATTTATCCATTGCAGAATATAGACCA
GATGAACAGTTTTATATCATCGCAGTATTTATTTGGAATACACATGGTCAAATAAATTTGACTATAAGGTTAAGGTGTAA
CGATAAACTTGAAGCAAACCAATGCTCAGAAAAAACAAATTCCGAAAAAGAAAAATTGATGAAACAAATTAAATCTATAA
ACATAATTAATAGTAAAAAGGAGTAA

Upstream 100 bases:

>100_bases
TATTGTTTTCATAATTTTTACTTATTTATATTGATTTAGGGTATATAATCTATATACTTATATACGATGAAGATTAAGAC
CTATGTTGGAGGTATGCCTC

Downstream 100 bases:

>100_bases
TGTTAAATGGAAAATATTTTATCTACTCCTGAATTAAAAACTAGAATAATCGATTTAGAATATAAACATTTTTCTCCTAA
AGCATTACAAAATACTTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MKKYMWLLLVVLFIIGGCGMNNDPEENVSPSEMNAEDLPDVPALQDEFTRKFIQSTKPVREGFYPFLSKSKSFTMDFPED
MVISNRTHNIGPDDRSETITFADVDKTKEIFVNYSLRYFKGEPNVEYTMIRMTESHDRELEFRDIETDNNSNLSIAEYRP
DEQFYIIAVFIWNTHGQINLTIRLRCNDKLEANQCSEKTNSEKEKLMKQIKSINIINSKKE

Sequences:

>Translated_221_residues
MKKYMWLLLVVLFIIGGCGMNNDPEENVSPSEMNAEDLPDVPALQDEFTRKFIQSTKPVREGFYPFLSKSKSFTMDFPED
MVISNRTHNIGPDDRSETITFADVDKTKEIFVNYSLRYFKGEPNVEYTMIRMTESHDRELEFRDIETDNNSNLSIAEYRP
DEQFYIIAVFIWNTHGQINLTIRLRCNDKLEANQCSEKTNSEKEKLMKQIKSINIINSKKE
>Mature_221_residues
MKKYMWLLLVVLFIIGGCGMNNDPEENVSPSEMNAEDLPDVPALQDEFTRKFIQSTKPVREGFYPFLSKSKSFTMDFPED
MVISNRTHNIGPDDRSETITFADVDKTKEIFVNYSLRYFKGEPNVEYTMIRMTESHDRELEFRDIETDNNSNLSIAEYRP
DEQFYIIAVFIWNTHGQINLTIRLRCNDKLEANQCSEKTNSEKEKLMKQIKSINIINSKKE

Specific function: Required for complex colony architecture [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004983 [H]

Pfam domain/function: PF03304 Mlp [H]

EC number: NA

Molecular weight: Translated: 25865; Mature: 25865

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYMWLLLVVLFIIGGCGMNNDPEENVSPSEMNAEDLPDVPALQDEFTRKFIQSTKPVR
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHH
EGFYPFLSKSKSFTMDFPEDMVISNRTHNIGPDDRSETITFADVDKTKEIFVNYSLRYFK
HCCHHHHCCCCCEEECCCCHHEECCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEEEEE
GEPNVEYTMIRMTESHDRELEFRDIETDNNSNLSIAEYRPDEQFYIIAVFIWNTHGQINL
CCCCCEEEEEEEECCCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEEEEEECCCCEEEE
TIRLRCNDKLEANQCSEKTNSEKEKLMKQIKSINIINSKKE
EEEEEECCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKKYMWLLLVVLFIIGGCGMNNDPEENVSPSEMNAEDLPDVPALQDEFTRKFIQSTKPVR
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHH
EGFYPFLSKSKSFTMDFPEDMVISNRTHNIGPDDRSETITFADVDKTKEIFVNYSLRYFK
HCCHHHHCCCCCEEECCCCHHEECCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEEEEE
GEPNVEYTMIRMTESHDRELEFRDIETDNNSNLSIAEYRPDEQFYIIAVFIWNTHGQINL
CCCCCEEEEEEEECCCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEEEEEECCCCEEEE
TIRLRCNDKLEANQCSEKTNSEKEKLMKQIKSINIINSKKE
EEEEEECCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]