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The map label for this gene is yvcA [H]

Identifier: 23098748

GI number: 23098748

Start: 1334196

End: 1334621

Strand: Reverse

Name: yvcA [H]

Synonym: OB1293

Alternate gene names: 23098748

Gene position: 1334621-1334196 (Counterclockwise)

Preceding gene: 23098749

Following gene: 23098747

Centisome position: 36.76

GC content: 36.62

Gene sequence:

>426_bases
ATGAAAAAATATTTGTGGTTATTAGTTGTCCTATTAATTACAGGAGGTTGCGGTATCAATGGTGATCAAGAAGAAAATTT
ACTTCCTTCTGATATGAACTTCGAAGACTCACCTGATGTTCCGGCCCTTCAAGATGAGTTTACACGGGAATTTATACAAT
CCACAGAACCTGTTCGTGAAGGCTCCTTCCCTTTCTTATCCAAGTCAAATGGTTTTACGATGGACTTTCCTGAGGATATG
GTGATAGACGAAAAAAGTCATATCGTTGGTCCAGATAACCGTAGTGAAACACTGGTTATAGGTTATAAAGAAGCAATTAA
TGATATCTTTATAAGTCATACATTCAACTACTTTAACGCTATCTCAAGTCCAGATAATAGTAAGGAGCAGCTCTCCCAAA
ATGCTGGTTATGACATAGAATTTTAA

Upstream 100 bases:

>100_bases
CAAAAATATTCACTTAAAAGATGGAACTGAATGAAGGTCCATTGAAAACCCACTTCAGGACTGGGTAACAAGATTAAGAT
TTACGTTGGAGGAATACCTC

Downstream 100 bases:

>100_bases
AAATATAGATAGTAACAATACAAAAACATTTGATACTGCAGAGTATAAAATAAATGACAAGAGGTTAATGCTAGTTTCAT
TATTATGGAATGATAATGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MKKYLWLLVVLLITGGCGINGDQEENLLPSDMNFEDSPDVPALQDEFTREFIQSTEPVREGSFPFLSKSNGFTMDFPEDM
VIDEKSHIVGPDNRSETLVIGYKEAINDIFISHTFNYFNAISSPDNSKEQLSQNAGYDIEF

Sequences:

>Translated_141_residues
MKKYLWLLVVLLITGGCGINGDQEENLLPSDMNFEDSPDVPALQDEFTREFIQSTEPVREGSFPFLSKSNGFTMDFPEDM
VIDEKSHIVGPDNRSETLVIGYKEAINDIFISHTFNYFNAISSPDNSKEQLSQNAGYDIEF
>Mature_141_residues
MKKYLWLLVVLLITGGCGINGDQEENLLPSDMNFEDSPDVPALQDEFTREFIQSTEPVREGSFPFLSKSNGFTMDFPEDM
VIDEKSHIVGPDNRSETLVIGYKEAINDIFISHTFNYFNAISSPDNSKEQLSQNAGYDIEF

Specific function: Required for complex colony architecture [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004983 [H]

Pfam domain/function: PF03304 Mlp [H]

EC number: NA

Molecular weight: Translated: 15954; Mature: 15954

Theoretical pI: Translated: 3.92; Mature: 3.92

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYLWLLVVLLITGGCGINGDQEENLLPSDMNFEDSPDVPALQDEFTREFIQSTEPVRE
CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
GSFPFLSKSNGFTMDFPEDMVIDEKSHIVGPDNRSETLVIGYKEAINDIFISHTFNYFNA
CCCCCEECCCCEEECCCCCCEECCCCCEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHH
ISSPDNSKEQLSQNAGYDIEF
CCCCCCCHHHHHHCCCCCCCC
>Mature Secondary Structure
MKKYLWLLVVLLITGGCGINGDQEENLLPSDMNFEDSPDVPALQDEFTREFIQSTEPVRE
CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
GSFPFLSKSNGFTMDFPEDMVIDEKSHIVGPDNRSETLVIGYKEAINDIFISHTFNYFNA
CCCCCEECCCCEEECCCCCCEECCCCCEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHH
ISSPDNSKEQLSQNAGYDIEF
CCCCCCCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]