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The map label for this gene is 23098448

Identifier: 23098448

GI number: 23098448

Start: 1037881

End: 1038441

Strand: Direct

Name: 23098448

Synonym: OB0993

Alternate gene names: NA

Gene position: 1037881-1038441 (Clockwise)

Preceding gene: 23098446

Following gene: 23098449

Centisome position: 28.59

GC content: 28.7

Gene sequence:

>561_bases
TTGAAAAAAGATCTTCGTATCATAAAGACAGAAAAAAACATCCGAACTGCATTGTTTTCTTTACTAAAGTCCAAGTCATT
AGAAGATATAACGGTATCTGAACTCTGTCGTAAGGCTCATGTAAATAGAGGAACATTTTATTTGCATTACGGAAATATTC
AAGATGTATTTAAACAAACTTTTGAAGAAATAGTGGAGGATTTAAAAATATCGTACGATGAACCATATAAACAGACAAAC
GATAATATTAATCAACTAGACGCAAATATGATACGAATATTTGATCATGTGAAAAGACATCAAAATTTTTATGAAATCGT
ATTCAATGAGCGTATTCCAATGACGTATTATTACTCTGTTTTTGATCGAATTCGTTTGTTGATGTCTTATTCCATTGAAA
AAGCGTTGACGACAACTACTAATATAGATAAGGATTATTTATTAAGCTATCAAACGAATGCAATTCTTGGTTTGTTAATT
CAATGGCATCGAAAAAATTATGGAACACCTGTAATGGAATTGAATAAACACTTATTAAAAATTATAAATTTCAATAGTTG
A

Upstream 100 bases:

>100_bases
TATACTGTAAGATAGAGATGGTTCCTATAAAAATAAGTTATGGTTTTTGATTAATCGACAGTTCTTCTTAAACATGTCTA
ATAAAAGGGGGATGAATAAA

Downstream 100 bases:

>100_bases
ATCAATTTCATGATTGTTACATTGGCAAAAGGAGAGAATACTAAAGGAACCCATTAATTATGTAACTTTTTACCACATTA
AATTGTTAAATAGTATAGAC

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; TetR Family Transcriptional Regulator; Transcription Regulator; AcrR Family Transcriptional Regulator; TetR Family Regulatory Protein

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MKKDLRIIKTEKNIRTALFSLLKSKSLEDITVSELCRKAHVNRGTFYLHYGNIQDVFKQTFEEIVEDLKISYDEPYKQTN
DNINQLDANMIRIFDHVKRHQNFYEIVFNERIPMTYYYSVFDRIRLLMSYSIEKALTTTTNIDKDYLLSYQTNAILGLLI
QWHRKNYGTPVMELNKHLLKIINFNS

Sequences:

>Translated_186_residues
MKKDLRIIKTEKNIRTALFSLLKSKSLEDITVSELCRKAHVNRGTFYLHYGNIQDVFKQTFEEIVEDLKISYDEPYKQTN
DNINQLDANMIRIFDHVKRHQNFYEIVFNERIPMTYYYSVFDRIRLLMSYSIEKALTTTTNIDKDYLLSYQTNAILGLLI
QWHRKNYGTPVMELNKHLLKIINFNS
>Mature_186_residues
MKKDLRIIKTEKNIRTALFSLLKSKSLEDITVSELCRKAHVNRGTFYLHYGNIQDVFKQTFEEIVEDLKISYDEPYKQTN
DNINQLDANMIRIFDHVKRHQNFYEIVFNERIPMTYYYSVFDRIRLLMSYSIEKALTTTTNIDKDYLLSYQTNAILGLLI
QWHRKNYGTPVMELNKHLLKIINFNS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22243; Mature: 22243

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKDLRIIKTEKNIRTALFSLLKSKSLEDITVSELCRKAHVNRGTFYLHYGNIQDVFKQT
CCCCCEEEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHH
FEEIVEDLKISYDEPYKQTNDNINQLDANMIRIFDHVKRHQNFYEIVFNERIPMTYYYSV
HHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCHHHHHHH
FDRIRLLMSYSIEKALTTTTNIDKDYLLSYQTNAILGLLIQWHRKNYGTPVMELNKHLLK
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
IINFNS
HHCCCC
>Mature Secondary Structure
MKKDLRIIKTEKNIRTALFSLLKSKSLEDITVSELCRKAHVNRGTFYLHYGNIQDVFKQT
CCCCCEEEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHH
FEEIVEDLKISYDEPYKQTNDNINQLDANMIRIFDHVKRHQNFYEIVFNERIPMTYYYSV
HHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCHHHHHHH
FDRIRLLMSYSIEKALTTTTNIDKDYLLSYQTNAILGLLIQWHRKNYGTPVMELNKHLLK
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
IINFNS
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA