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The map label for this gene is 23098335

Identifier: 23098335

GI number: 23098335

Start: 933164

End: 933949

Strand: Direct

Name: 23098335

Synonym: OB0880

Alternate gene names: NA

Gene position: 933164-933949 (Clockwise)

Preceding gene: 23098334

Following gene: 23098336

Centisome position: 25.7

GC content: 33.84

Gene sequence:

>786_bases
ATGAAAAAAACAACATCTTTACTCGTTTTTCTTACCTTTTTTGTTGTATTACTACCTTTAAACACTGTTCAGGCTTATGG
GTGGGGGTATAGTAAAAATTCAAATCATGAAATACCGGATATTGGTTCATATCAAGCATTGTTAGATAAATATAATGCGT
ATTATGTCGATGATTCGGGAGAAAAAGTATTATATTTAACGTTTGATAATGGTTATGAACAAGGATATACGGATGAAATT
CTTGATGTTTTAAAGGAAGAAAAAGTACCTGCAACCTTTTTTGTAACCGGTCATTATGTTAAAAGTAAACCAGATTTAAT
AAAACGAATGGTGGATGAAGGACATATTATTGGAAATCACTCTTATCACCATCCAGACTTTACTATTATGAACAAACAAG
CCATACAAAAAGAAGTAGAGGAATTGGAAGCTGCAGTAGCCGAAGTAAGTGATCAGAAAGAAATGATGTATTTGCGCCCG
CCAAGAGGAGTATTTAATGAAGATACATTAAAATGGTCAAATGAATTAGGCTTAGTCCATATCTTTTGGTCACTTGCTTT
TATGGACTGGAATACAGACGGTCAAAAAGGCTGGCAATATGCGCACGGTCAAATAATGGATCAAATACATCCTGGTGCGA
TTATTCTCCTCCATGCTGTCTCATCAGATAATGCAAAAGCATTGAAACAAGTAGTCAAAGATTTAAAAGAGCAAGGCTAT
ACATTCAAAAGCTTGGATCATTTGATGTTAAAAAATCAATTACCACAAGGTTTTCCTATGTACTAA

Upstream 100 bases:

>100_bases
ATTCCTTTATTTATATTCGGATGGATAGCGGCAATGGTTCTATAATGCATAAAAAAATATCAAACAGGATAAGGTAAGAA
AAAACTTAGGTGGGGATTGT

Downstream 100 bases:

>100_bases
AATGGGAATAGTAATATTGTAAAGGTTAAAGGAGCTGTTTTCATCTACGGCTCCTTTTGTGTATTTTAATAACTTGGCAA
AGGTCAAACTTTTTATAAAA

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MKKTTSLLVFLTFFVVLLPLNTVQAYGWGYSKNSNHEIPDIGSYQALLDKYNAYYVDDSGEKVLYLTFDNGYEQGYTDEI
LDVLKEEKVPATFFVTGHYVKSKPDLIKRMVDEGHIIGNHSYHHPDFTIMNKQAIQKEVEELEAAVAEVSDQKEMMYLRP
PRGVFNEDTLKWSNELGLVHIFWSLAFMDWNTDGQKGWQYAHGQIMDQIHPGAIILLHAVSSDNAKALKQVVKDLKEQGY
TFKSLDHLMLKNQLPQGFPMY

Sequences:

>Translated_261_residues
MKKTTSLLVFLTFFVVLLPLNTVQAYGWGYSKNSNHEIPDIGSYQALLDKYNAYYVDDSGEKVLYLTFDNGYEQGYTDEI
LDVLKEEKVPATFFVTGHYVKSKPDLIKRMVDEGHIIGNHSYHHPDFTIMNKQAIQKEVEELEAAVAEVSDQKEMMYLRP
PRGVFNEDTLKWSNELGLVHIFWSLAFMDWNTDGQKGWQYAHGQIMDQIHPGAIILLHAVSSDNAKALKQVVKDLKEQGY
TFKSLDHLMLKNQLPQGFPMY
>Mature_261_residues
MKKTTSLLVFLTFFVVLLPLNTVQAYGWGYSKNSNHEIPDIGSYQALLDKYNAYYVDDSGEKVLYLTFDNGYEQGYTDEI
LDVLKEEKVPATFFVTGHYVKSKPDLIKRMVDEGHIIGNHSYHHPDFTIMNKQAIQKEVEELEAAVAEVSDQKEMMYLRP
PRGVFNEDTLKWSNELGLVHIFWSLAFMDWNTDGQKGWQYAHGQIMDQIHPGAIILLHAVSSDNAKALKQVVKDLKEQGY
TFKSLDHLMLKNQLPQGFPMY

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323338, Length=155, Percent_Identity=27.741935483871, Blast_Score=66, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509
- InterPro:   IPR014235 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 30005; Mature: 30005

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTTSLLVFLTFFVVLLPLNTVQAYGWGYSKNSNHEIPDIGSYQALLDKYNAYYVDDSG
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEECCC
EKVLYLTFDNGYEQGYTDEILDVLKEEKVPATFFVTGHYVKSKPDLIKRMVDEGHIIGNH
CEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEECCEECCCHHHHHHHHHCCEEECCC
SYHHPDFTIMNKQAIQKEVEELEAAVAEVSDQKEMMYLRPPRGVFNEDTLKWSNELGLVH
CCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHCCCCCHHE
IFWSLAFMDWNTDGQKGWQYAHGQIMDQIHPGAIILLHAVSSDNAKALKQVVKDLKEQGY
EEEHHHHEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCC
TFKSLDHLMLKNQLPQGFPMY
CHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKKTTSLLVFLTFFVVLLPLNTVQAYGWGYSKNSNHEIPDIGSYQALLDKYNAYYVDDSG
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEECCC
EKVLYLTFDNGYEQGYTDEILDVLKEEKVPATFFVTGHYVKSKPDLIKRMVDEGHIIGNH
CEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEECCEECCCHHHHHHHHHCCEEECCC
SYHHPDFTIMNKQAIQKEVEELEAAVAEVSDQKEMMYLRPPRGVFNEDTLKWSNELGLVH
CCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHCCCCCHHE
IFWSLAFMDWNTDGQKGWQYAHGQIMDQIHPGAIILLHAVSSDNAKALKQVVKDLKEQGY
EEEHHHHEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCC
TFKSLDHLMLKNQLPQGFPMY
CHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8473853 [H]