| Definition | Oceanobacillus iheyensis HTE831, complete genome. |
|---|---|
| Accession | NC_004193 |
| Length | 3,630,528 |
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The map label for this gene is cdr [H]
Identifier: 23098314
GI number: 23098314
Start: 909917
End: 911260
Strand: Reverse
Name: cdr [H]
Synonym: OB0859
Alternate gene names: 23098314
Gene position: 911260-909917 (Counterclockwise)
Preceding gene: 23098315
Following gene: 23098306
Centisome position: 25.1
GC content: 37.05
Gene sequence:
>1344_bases ATGTCTAAAAAAATTATTATTGTCGGTGGTGTTGGGGGTGGAGCAACGGTTGCCGCACAAATTAGAAGAACGAATAAAAC GGCAGAAATTCTTGTACTAGAACGAAATGGATATGTATCTTTTGCAAATTGCGGTATGCCATATTATCTGGGAGGTACAA TTACTGATCGTCAAAAATTAATTTATCCTGAAGAAAAGTTTGCACAAAAATATGACCTAACCGTACAAACACATGCAAAT GTTACCAAAATTAACCGGGAACAAAAAAGCGTTGTATATGAAAAGTATAAAACAGAACACAAAGCTGACTATGATATTCT TATATTGTCCCCAGGAGCATCGCCTGTATTACCTGATATAGCTGGATTACAACAATCTAATACGTTTCCGTTAAGGACGA TTGAAGATATGGATAATATAGAACAGTTTATTCAATCTAATAATCCGCAATCTGCTGCGATTATTGGCGGAGGTTTTATT GGATTAGAAATGGCAGAAAGTCTGTGTCATCGAGGGTTCTCCTGTTCTCTAGTAGATCGTTCTGAGCATGTATTAAAACG AATCGATAAAGAAATGGCAATACATATAGATGAACATTTACAAGAAAAAGGAATAGCTTTGTATGTCAATGATGGATTAA AAAGCTTTTCAGATAATGGTACCACCTTACACCTTTCGAGTGATAAAACGATCCAAGCTGATATGACTATTATGGCAATA GGAATAAAACCAAATACAGAGCTTGCCATTGATGCCGGATTGGAAATTGGAGAAACTGGTGGAATTAAAGTAAATCAATA TATGCAAACTACCGACCCAACTATCTTTGCTCTCGGTGATGCAGTAGAAGTTACTGATTTCATAACTAGAGAACCTGCTC ATATTGCCTTAGCTTGGCCAGCTCATAGGCAAGCATTCATTATCTCTTCGTTCTTAAGTGGCAATCCTATATCTGATGAT GGAATAATTGGGTCATCAATTTTGCGTGTCTTTGATTTAACTGTTGCAGCTACTGGGCAAAACAAACAGACGTTAATCGA TAATGAGATTGCATTCGAAGAAACGATAATGAAAGGTTATTCTCATGCAGCATATTACCCTGGCTCAAAGGAGCTTTGGA TGCAAATTGTCTATGATAAAAATACCGGACAATTATTTGGTGGAAGCGTAATTGGATTTGACGGCGCAGATAAACGCATG GCTGTTCTAGCTACAGCTATCAAAGGTAAGTTAACAGTAGCAGATTTGGCTTCATTAGAATTAGGTTATTCCCCCATTTA TTCAGGCGCAAAAGATCCTTTAAATATACTAGGCTATAAAGCCATGGAACAGCTAGAGGATTAG
Upstream 100 bases:
>100_bases AATAGATATTTTGTGCCTCTCATCTATTTGATGAGAGGTTTTTTATAACGAGCTTAAACTAGTCAACTGGTAAAAGTCTT ACTAATTGGGAGTGAATAAT
Downstream 100 bases:
>100_bases TCGAAGCAGTGTCTGCAAAAAGCGGTATCTGCAATGGATATACAGAATAAATGATGTAATGAATGTAAATAGAGATTTAA CGCATTGGACATTAAACTCC
Product: NADH oxidase
Products: NA
Alternate protein names: CoA-disulfide reductase; CoADR [H]
Number of amino acids: Translated: 447; Mature: 446
Protein sequence:
>447_residues MSKKIIIVGGVGGGATVAAQIRRTNKTAEILVLERNGYVSFANCGMPYYLGGTITDRQKLIYPEEKFAQKYDLTVQTHAN VTKINREQKSVVYEKYKTEHKADYDILILSPGASPVLPDIAGLQQSNTFPLRTIEDMDNIEQFIQSNNPQSAAIIGGGFI GLEMAESLCHRGFSCSLVDRSEHVLKRIDKEMAIHIDEHLQEKGIALYVNDGLKSFSDNGTTLHLSSDKTIQADMTIMAI GIKPNTELAIDAGLEIGETGGIKVNQYMQTTDPTIFALGDAVEVTDFITREPAHIALAWPAHRQAFIISSFLSGNPISDD GIIGSSILRVFDLTVAATGQNKQTLIDNEIAFEETIMKGYSHAAYYPGSKELWMQIVYDKNTGQLFGGSVIGFDGADKRM AVLATAIKGKLTVADLASLELGYSPIYSGAKDPLNILGYKAMEQLED
Sequences:
>Translated_447_residues MSKKIIIVGGVGGGATVAAQIRRTNKTAEILVLERNGYVSFANCGMPYYLGGTITDRQKLIYPEEKFAQKYDLTVQTHAN VTKINREQKSVVYEKYKTEHKADYDILILSPGASPVLPDIAGLQQSNTFPLRTIEDMDNIEQFIQSNNPQSAAIIGGGFI GLEMAESLCHRGFSCSLVDRSEHVLKRIDKEMAIHIDEHLQEKGIALYVNDGLKSFSDNGTTLHLSSDKTIQADMTIMAI GIKPNTELAIDAGLEIGETGGIKVNQYMQTTDPTIFALGDAVEVTDFITREPAHIALAWPAHRQAFIISSFLSGNPISDD GIIGSSILRVFDLTVAATGQNKQTLIDNEIAFEETIMKGYSHAAYYPGSKELWMQIVYDKNTGQLFGGSVIGFDGADKRM AVLATAIKGKLTVADLASLELGYSPIYSGAKDPLNILGYKAMEQLED >Mature_446_residues SKKIIIVGGVGGGATVAAQIRRTNKTAEILVLERNGYVSFANCGMPYYLGGTITDRQKLIYPEEKFAQKYDLTVQTHANV TKINREQKSVVYEKYKTEHKADYDILILSPGASPVLPDIAGLQQSNTFPLRTIEDMDNIEQFIQSNNPQSAAIIGGGFIG LEMAESLCHRGFSCSLVDRSEHVLKRIDKEMAIHIDEHLQEKGIALYVNDGLKSFSDNGTTLHLSSDKTIQADMTIMAIG IKPNTELAIDAGLEIGETGGIKVNQYMQTTDPTIFALGDAVEVTDFITREPAHIALAWPAHRQAFIISSFLSGNPISDDG IIGSSILRVFDLTVAATGQNKQTLIDNEIAFEETIMKGYSHAAYYPGSKELWMQIVYDKNTGQLFGGSVIGFDGADKRMA VLATAIKGKLTVADLASLELGYSPIYSGAKDPLNILGYKAMEQLED
Specific function: Catalyzes specifically the NADPH-dependent reduction of coenzyme A disulfide [H]
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-III pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Homo sapiens, GI226437568, Length=310, Percent_Identity=25.8064516129032, Blast_Score=109, Evalue=4e-24, Organism=Homo sapiens, GI21389617, Length=310, Percent_Identity=25.8064516129032, Blast_Score=109, Evalue=5e-24, Organism=Homo sapiens, GI65787454, Length=310, Percent_Identity=25.8064516129032, Blast_Score=109, Evalue=5e-24, Organism=Escherichia coli, GI1789065, Length=320, Percent_Identity=25.9375, Blast_Score=102, Evalue=4e-23, Organism=Escherichia coli, GI1788892, Length=281, Percent_Identity=26.3345195729537, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1789765, Length=340, Percent_Identity=21.1764705882353, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI87082354, Length=181, Percent_Identity=28.7292817679558, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1789915, Length=189, Percent_Identity=28.042328042328, Blast_Score=62, Evalue=7e-11, Organism=Caenorhabditis elegans, GI32565766, Length=291, Percent_Identity=23.7113402061856, Blast_Score=68, Evalue=9e-12, Organism=Caenorhabditis elegans, GI17559934, Length=287, Percent_Identity=20.9059233449477, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI24639257, Length=284, Percent_Identity=22.1830985915493, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI281359715, Length=282, Percent_Identity=22.3404255319149, Blast_Score=83, Evalue=3e-16, Organism=Drosophila melanogaster, GI281359713, Length=282, Percent_Identity=22.3404255319149, Blast_Score=83, Evalue=3e-16, Organism=Drosophila melanogaster, GI24639250, Length=282, Percent_Identity=22.3404255319149, Blast_Score=83, Evalue=3e-16, Organism=Drosophila melanogaster, GI18543267, Length=282, Percent_Identity=22.3404255319149, Blast_Score=83, Evalue=3e-16, Organism=Drosophila melanogaster, GI24639252, Length=282, Percent_Identity=22.3404255319149, Blast_Score=83, Evalue=3e-16, Organism=Drosophila melanogaster, GI24585130, Length=283, Percent_Identity=22.2614840989399, Blast_Score=71, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017758 - InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR004099 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.8.1.14 [H]
Molecular weight: Translated: 48785; Mature: 48654
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKIIIVGGVGGGATVAAQIRRTNKTAEILVLERNGYVSFANCGMPYYLGGTITDRQKL CCCEEEEEECCCCCHHEEEEHHHCCCCEEEEEEECCCEEEEECCCCCEEECCEEECCCEE IYPEEKFAQKYDLTVQTHANVTKINREQKSVVYEKYKTEHKADYDILILSPGASPVLPDI ECCHHHHHHHCCEEEEECCCCEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHH AGLQQSNTFPLRTIEDMDNIEQFIQSNNPQSAAIIGGGFIGLEMAESLCHRGFSCSLVDR HCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCEEEEECC SEHVLKRIDKEMAIHIDEHLQEKGIALYVNDGLKSFSDNGTTLHLSSDKTIQADMTIMAI HHHHHHHHCHHHEEEEHHHHHHCCEEEEEECCCHHCCCCCCEEEECCCCEEEECEEEEEE GIKPNTELAIDAGLEIGETGGIKVNQYMQTTDPTIFALGDAVEVTDFITREPAHIALAWP ECCCCCCEEEECCCEECCCCCEEEEEEEECCCCEEEEECCCHHHHHHHCCCCCEEEEECC AHRQAFIISSFLSGNPISDDGIIGSSILRVFDLTVAATGQNKQTLIDNEIAFEETIMKGY CCCCEEEEEHHHCCCCCCCCCCHHHHHHHHHEEEEEECCCCCCEEECCHHHHHHHHHHCC SHAAYYPGSKELWMQIVYDKNTGQLFGGSVIGFDGADKRMAVLATAIKGKLTVADLASLE CCEEECCCCHHEEEEEEEECCCCCEECCEEEECCCCCCHHEEEEHHHCCCEEEEHHHHHH LGYSPIYSGAKDPLNILGYKAMEQLED CCCCHHCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure SKKIIIVGGVGGGATVAAQIRRTNKTAEILVLERNGYVSFANCGMPYYLGGTITDRQKL CCEEEEEECCCCCHHEEEEHHHCCCCEEEEEEECCCEEEEECCCCCEEECCEEECCCEE IYPEEKFAQKYDLTVQTHANVTKINREQKSVVYEKYKTEHKADYDILILSPGASPVLPDI ECCHHHHHHHCCEEEEECCCCEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHH AGLQQSNTFPLRTIEDMDNIEQFIQSNNPQSAAIIGGGFIGLEMAESLCHRGFSCSLVDR HCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCEEEEECC SEHVLKRIDKEMAIHIDEHLQEKGIALYVNDGLKSFSDNGTTLHLSSDKTIQADMTIMAI HHHHHHHHCHHHEEEEHHHHHHCCEEEEEECCCHHCCCCCCEEEECCCCEEEECEEEEEE GIKPNTELAIDAGLEIGETGGIKVNQYMQTTDPTIFALGDAVEVTDFITREPAHIALAWP ECCCCCCEEEECCCEECCCCCEEEEEEEECCCCEEEEECCCHHHHHHHCCCCCEEEEECC AHRQAFIISSFLSGNPISDDGIIGSSILRVFDLTVAATGQNKQTLIDNEIAFEETIMKGY CCCCEEEEEHHHCCCCCCCCCCHHHHHHHHHEEEEEECCCCCCEEECCHHHHHHHHHHCC SHAAYYPGSKELWMQIVYDKNTGQLFGGSVIGFDGADKRMAVLATAIKGKLTVADLASLE CCEEECCCCHHEEEEEEEECCCCCEECCEEEECCCCCCHHEEEEHHHCCCEEEEHHHHHH LGYSPIYSGAKDPLNILGYKAMEQLED CCCCHHCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA