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The map label for this gene is xhlB [H]

Identifier: 23098308

GI number: 23098308

Start: 904337

End: 904570

Strand: Direct

Name: xhlB [H]

Synonym: OB0853

Alternate gene names: 23098308

Gene position: 904337-904570 (Clockwise)

Preceding gene: 23098307

Following gene: 23098309

Centisome position: 24.91

GC content: 35.47

Gene sequence:

>234_bases
ATGGACAAAGGAACGATTATTCGAACTATCGTACTTGTTCTAGCTTTAACGAATCAGTTTTTGATCACTGCTGGATACCA
TCCCATACCTGGAACACAAGAGCTCTGGGGAGAAATCCTTTCATCTATTTTTACTATTGTAGCTACCTTAACAGCTTGGT
TCAAAAATAATTATGTGACATACAAAGGCAAAAAACAACATCAAGTACTTGTGGAACATCAATTAGCAAAATAA

Upstream 100 bases:

>100_bases
ATAAAACATTTCGGTTGATTTTTCTTTTTTATATTATTTTTTGTTTTAGGGTGTGAAAATTGACGAATACATGCCTTTAT
ATATAAAAGGAGGTGGGGAC

Downstream 100 bases:

>100_bases
TAAAATATGGACAAGGAGGATAAGTATGAAGCGAATTTTTATTGATCCTGGTCATGGAGGAAATGACCCTGGTGCAATGG
GAAATGGATTACAGGAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 77

Protein sequence:

>77_residues
MDKGTIIRTIVLVLALTNQFLITAGYHPIPGTQELWGEILSSIFTIVATLTAWFKNNYVTYKGKKQHQVLVEHQLAK

Sequences:

>Translated_77_residues
MDKGTIIRTIVLVLALTNQFLITAGYHPIPGTQELWGEILSSIFTIVATLTAWFKNNYVTYKGKKQHQVLVEHQLAK
>Mature_77_residues
MDKGTIIRTIVLVLALTNQFLITAGYHPIPGTQELWGEILSSIFTIVATLTAWFKNNYVTYKGKKQHQVLVEHQLAK

Specific function: Involved in cell lysis upon induction of pbsX [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SPP1 holin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006479
- ProDom:   PD008023 [H]

Pfam domain/function: PF04688 Phage_holin [H]

EC number: NA

Molecular weight: Translated: 8712; Mature: 8712

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKGTIIRTIVLVLALTNQFLITAGYHPIPGTQELWGEILSSIFTIVATLTAWFKNNYVT
CCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEE
YKGKKQHQVLVEHQLAK
ECCCCHHHHHHHHHCCC
>Mature Secondary Structure
MDKGTIIRTIVLVLALTNQFLITAGYHPIPGTQELWGEILSSIFTIVATLTAWFKNNYVT
CCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEE
YKGKKQHQVLVEHQLAK
ECCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2033382; 7921239; 9555893; 9384377 [H]