| Definition | Oceanobacillus iheyensis HTE831, complete genome. |
|---|---|
| Accession | NC_004193 |
| Length | 3,630,528 |
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The map label for this gene is 23098091
Identifier: 23098091
GI number: 23098091
Start: 664955
End: 665572
Strand: Direct
Name: 23098091
Synonym: OB0636
Alternate gene names: NA
Gene position: 664955-665572 (Clockwise)
Preceding gene: 23098089
Following gene: 23098092
Centisome position: 18.32
GC content: 30.74
Gene sequence:
>618_bases ATGAAAGAAAACTATACAGATTTAAGGATTATAAGGACTCAGAAAGCAATTCGAACTGCTTTTGTTGAATTGATTCGTGA TAAAGGATTTGATGCTGTTACTGTGAAAGAAATTACAAACAAAGCAGAGATAAATCGAGGAACTTTTTACGTTCATTATG AAGATAAGCATGACTTAATGATCAAAAGCCAAGAAGAAGTAATAGAGGAAATGGCTAGCCTTATTAAAAAAAACCTCCCT AAAATTATAGACGATTTTAGTCATTCAGGAACAACTAAAATACCTTTTCAACTAGCAGTTATTATTTTTCAATACATAAA TGATAACAGTAACTTCATACAAGCAGTTCTAAGTCCAAAAGGTGATCTGTCTTTTCATTCAAGATTAAAAGAATTTATTT GGGGTTCTATATTTAATAATAATTACAACAATATTATTGATGAAGATAAGACAATAGTTCCTGGGAAATATATTGTCTCA TATATTGCTTCAGCTCATTTGGGTGTTATTCAAGAATGGATTGAAAGTGGAAGAAAAGAATCCCCAGAACATATGGCGCA AGTTCTATCCACAATTACAATTAATGGGGCTTATTATGCGGCTGGCATTAAAAAATAA
Upstream 100 bases:
>100_bases GTCTTCTGCTAATGACTTTTATACAATAGACAGAAATAGATATATGTTGGTTAACAGACATATTTAGGATTATGTTCATT AATTTTTTCGGGAGGGTATC
Downstream 100 bases:
>100_bases TGAACTACATGCTATTGTTAGAAATGTAGTTCTAAAAAAATAGTTATACTAACGAGGGTTTATTTAAGTAAGGTTATACA ATTTATATTTTTGTACTTCC
Product: transcriptional regulator
Products: NA
Alternate protein names: TetR Family Transcriptional Regulator; Transcriptional Regulator TetR Family; TetR/AcrR Family Transcriptional Regulator; TetR Family Regulatory Protein; Transcription Regulator; Regulatory Protein TetR; TetR Family Regulatory Protein Of MDR Cluster; AcrR Family Transcriptional Regulator; TetR Family HTH Transcriptional Regulator; Acrr-Type Transcriptional Regulator; Transcriptional Regulator Tetr Family; Regulatory Protein; AcrR Protein
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MKENYTDLRIIRTQKAIRTAFVELIRDKGFDAVTVKEITNKAEINRGTFYVHYEDKHDLMIKSQEEVIEEMASLIKKNLP KIIDDFSHSGTTKIPFQLAVIIFQYINDNSNFIQAVLSPKGDLSFHSRLKEFIWGSIFNNNYNNIIDEDKTIVPGKYIVS YIASAHLGVIQEWIESGRKESPEHMAQVLSTITINGAYYAAGIKK
Sequences:
>Translated_205_residues MKENYTDLRIIRTQKAIRTAFVELIRDKGFDAVTVKEITNKAEINRGTFYVHYEDKHDLMIKSQEEVIEEMASLIKKNLP KIIDDFSHSGTTKIPFQLAVIIFQYINDNSNFIQAVLSPKGDLSFHSRLKEFIWGSIFNNNYNNIIDEDKTIVPGKYIVS YIASAHLGVIQEWIESGRKESPEHMAQVLSTITINGAYYAAGIKK >Mature_205_residues MKENYTDLRIIRTQKAIRTAFVELIRDKGFDAVTVKEITNKAEINRGTFYVHYEDKHDLMIKSQEEVIEEMASLIKKNLP KIIDDFSHSGTTKIPFQLAVIIFQYINDNSNFIQAVLSPKGDLSFHSRLKEFIWGSIFNNNYNNIIDEDKTIVPGKYIVS YIASAHLGVIQEWIESGRKESPEHMAQVLSTITINGAYYAAGIKK
Specific function: Unknown
COG id: COG1309
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23477; Mature: 23477
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKENYTDLRIIRTQKAIRTAFVELIRDKGFDAVTVKEITNKAEINRGTFYVHYEDKHDLM CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCEEEEEECCCCCCE IKSQEEVIEEMASLIKKNLPKIIDDFSHSGTTKIPFQLAVIIFQYINDNSNFIQAVLSPK EECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCC GDLSFHSRLKEFIWGSIFNNNYNNIIDEDKTIVPGKYIVSYIASAHLGVIQEWIESGRKE CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCC SPEHMAQVLSTITINGAYYAAGIKK CHHHHHHHHHHHHCCCEEEECCCCC >Mature Secondary Structure MKENYTDLRIIRTQKAIRTAFVELIRDKGFDAVTVKEITNKAEINRGTFYVHYEDKHDLM CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCEEEEEECCCCCCE IKSQEEVIEEMASLIKKNLPKIIDDFSHSGTTKIPFQLAVIIFQYINDNSNFIQAVLSPK EECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCC GDLSFHSRLKEFIWGSIFNNNYNNIIDEDKTIVPGKYIVSYIASAHLGVIQEWIESGRKE CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCC SPEHMAQVLSTITINGAYYAAGIKK CHHHHHHHHHHHHCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA