Click here to switch to the map view.

The map label for this gene is yisX [H]

Identifier: 23098092

GI number: 23098092

Start: 665824

End: 666456

Strand: Direct

Name: yisX [H]

Synonym: OB0637

Alternate gene names: 23098092

Gene position: 665824-666456 (Clockwise)

Preceding gene: 23098091

Following gene: 23098093

Centisome position: 18.34

GC content: 32.39

Gene sequence:

>633_bases
GTGAAAATTGATGCACCCAAAATCCCTGAAGATCTAAAAGCGAGAAGATTTACAGATATTTTTTTTTTAGAAGATCCGGA
ATTTGAAATGTGTATGGTTACCGATTCTGAATTTGTCGATGAAGTACTTGATCGAATGCGATTATATAAAACAGTAATTA
GGAACTGTAATTTTACAAATACGGATTTTAGCCGAATAGATCTTACCGATGTGTGCTTTGAGAATTGTGATTTATCCAAC
GCTAATTTGAGCAATGCCTCCATGAATCGAGTTGAGTTTCTTAATTGTAAGTTACTTGGTAGTAACTTAACAGATTCTTA
TATCGGTAATGCGATATTTCGGGAATCGATTCTAAATATGGGGCTGTTCGGTAACTCAAAACTTGAAAAGGTGATTTTTG
ATAATACGGAGTTAGAAAGTGCTGACCTTTTTGATTGTAAGCTTAAAAAAGTAGAATTTCTTTCATGCAATCTTAATGGG
GTAAACTTTGATGAGACATCGTTAAAAGGAATTGACATAAGCACATCTTATTTTGATTTTTTGACAGTTTCAATGAAAAA
TCTAAAAGGATGTATAGTATCATCGTCTCAAGCGATACAATTTGCTTCGCTATTAGGTTTAAAAATTAAATAG

Upstream 100 bases:

>100_bases
TAGTAAAGTCAAGCCTTGAAAAGGAACGTGCTTTTCCTTATATTTATATCCAGAAAGTTTATAAATGAAATAAATTCGTG
TGAAAGTAGGTTGGTATACA

Downstream 100 bases:

>100_bases
AATTGAGACTGATAAGGTCAGAGAGAGTGGCGGGATGCGAAATTTCGTGAATTTGAAGGTGTTGGACACGAATTAAATAA
GGATACTTAAGAAAAATTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MKIDAPKIPEDLKARRFTDIFFLEDPEFEMCMVTDSEFVDEVLDRMRLYKTVIRNCNFTNTDFSRIDLTDVCFENCDLSN
ANLSNASMNRVEFLNCKLLGSNLTDSYIGNAIFRESILNMGLFGNSKLEKVIFDNTELESADLFDCKLKKVEFLSCNLNG
VNFDETSLKGIDISTSYFDFLTVSMKNLKGCIVSSSQAIQFASLLGLKIK

Sequences:

>Translated_210_residues
MKIDAPKIPEDLKARRFTDIFFLEDPEFEMCMVTDSEFVDEVLDRMRLYKTVIRNCNFTNTDFSRIDLTDVCFENCDLSN
ANLSNASMNRVEFLNCKLLGSNLTDSYIGNAIFRESILNMGLFGNSKLEKVIFDNTELESADLFDCKLKKVEFLSCNLNG
VNFDETSLKGIDISTSYFDFLTVSMKNLKGCIVSSSQAIQFASLLGLKIK
>Mature_210_residues
MKIDAPKIPEDLKARRFTDIFFLEDPEFEMCMVTDSEFVDEVLDRMRLYKTVIRNCNFTNTDFSRIDLTDVCFENCDLSN
ANLSNASMNRVEFLNCKLLGSNLTDSYIGNAIFRESILNMGLFGNSKLEKVIFDNTELESADLFDCKLKKVEFLSCNLNG
VNFDETSLKGIDISTSYFDFLTVSMKNLKGCIVSSSQAIQFASLLGLKIK

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 pentapeptide repeat domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646
- InterPro:   IPR012334 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 23849; Mature: 23849

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIDAPKIPEDLKARRFTDIFFLEDPEFEMCMVTDSEFVDEVLDRMRLYKTVIRNCNFTN
CCCCCCCCCHHHHHHHCEEEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCC
TDFSRIDLTDVCFENCDLSNANLSNASMNRVEFLNCKLLGSNLTDSYIGNAIFRESILNM
CCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHC
GLFGNSKLEKVIFDNTELESADLFDCKLKKVEFLSCNLNGVNFDETSLKGIDISTSYFDF
CCCCCCCHHHEEECCCCCCCCCCCCEEECEEEEEEECCCCCCCCCCCCCCEECCHHHHHH
LTVSMKNLKGCIVSSSQAIQFASLLGLKIK
HHHHHHHCCEEEECCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MKIDAPKIPEDLKARRFTDIFFLEDPEFEMCMVTDSEFVDEVLDRMRLYKTVIRNCNFTN
CCCCCCCCCHHHHHHHCEEEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCC
TDFSRIDLTDVCFENCDLSNANLSNASMNRVEFLNCKLLGSNLTDSYIGNAIFRESILNM
CCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHC
GLFGNSKLEKVIFDNTELESADLFDCKLKKVEFLSCNLNGVNFDETSLKGIDISTSYFDF
CCCCCCCHHHEEECCCCCCCCCCCCEEECEEEEEEECCCCCCCCCCCCCCEECCHHHHHH
LTVSMKNLKGCIVSSSQAIQFASLLGLKIK
HHHHHHHCCEEEECCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353932; 9384377 [H]