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The map label for this gene is pfpI [H]

Identifier: 23097961

GI number: 23097961

Start: 542282

End: 542806

Strand: Reverse

Name: pfpI [H]

Synonym: OB0506

Alternate gene names: 23097961

Gene position: 542806-542282 (Counterclockwise)

Preceding gene: 23097962

Following gene: 23097960

Centisome position: 14.95

GC content: 38.67

Gene sequence:

>525_bases
ATGCAATTAAAAAATAAAAAAGTATTAGCACTTGTTGATCATGACTTTGAAGATTTAGAATTATGGTATCCTGTCCTCCG
GTTACGAGAAGAAGGAGCACAGGTCGATCTTATTGGAAAAGAAGCAAATCACAAATATATTGGCAAGTATGGTGTGCCCG
TAGAATCTGACTTTGCATTTACGGATGTAAACGATGCTGATTACGATGCAATTCTAGTACCTGGCGGTTGGGCACCAGAT
AAGCTACGTAGATTCCCAGAAGTTCTTGATATGGTTCGTAATATGAATCAAGCCAAGAAACCAATTGGTCAAATTTGTCA
CGCTGGCTGGGTGCTTATATCTGCAAATATCCTTAACGGAAAAACAGTAACAAGTACACCTGGGATTAAAGATGATATGA
CAAATGCTGGAGCAACTTGGGTGGATGAACCTGTCGTTGTGGATGAACATTTAGTATCAAGTCGTCGTCCACCAGATCTA
CCAGATTATTTACGAGAATTTATTAACGTACTAGCAAATAAATAG

Upstream 100 bases:

>100_bases
AACCGTTTTTTTATGCTTTCTTAAGCATATCCTTAATCATTCTAATCGTCATCTGAGACCACGTCTGTTAAACTTATACA
TAGAATGGAGGAATAAAACG

Downstream 100 bases:

>100_bases
GAGGTATATTGGTTATGAAAATTGTTTCTATTGAACCAACACCTAGCCCACATTCAATGAAGATTAATTTGAGTGAGTCT
CTACCTCCAGAAGAAACGTA

Product: intracellular proteinase

Products: NA

Alternate protein names: Intracellular protease I [H]

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MQLKNKKVLALVDHDFEDLELWYPVLRLREEGAQVDLIGKEANHKYIGKYGVPVESDFAFTDVNDADYDAILVPGGWAPD
KLRRFPEVLDMVRNMNQAKKPIGQICHAGWVLISANILNGKTVTSTPGIKDDMTNAGATWVDEPVVVDEHLVSSRRPPDL
PDYLREFINVLANK

Sequences:

>Translated_174_residues
MQLKNKKVLALVDHDFEDLELWYPVLRLREEGAQVDLIGKEANHKYIGKYGVPVESDFAFTDVNDADYDAILVPGGWAPD
KLRRFPEVLDMVRNMNQAKKPIGQICHAGWVLISANILNGKTVTSTPGIKDDMTNAGATWVDEPVVVDEHLVSSRRPPDL
PDYLREFINVLANK
>Mature_174_residues
MQLKNKKVLALVDHDFEDLELWYPVLRLREEGAQVDLIGKEANHKYIGKYGVPVESDFAFTDVNDADYDAILVPGGWAPD
KLRRFPEVLDMVRNMNQAKKPIGQICHAGWVLISANILNGKTVTSTPGIKDDMTNAGATWVDEPVVVDEHLVSSRRPPDL
PDYLREFINVLANK

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PfpI endopeptidase domain [H]

Homologues:

Organism=Escherichia coli, GI87082219, Length=170, Percent_Identity=38.2352941176471, Blast_Score=114, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI17558714, Length=171, Percent_Identity=25.7309941520468, Blast_Score=66, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006286
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 19569; Mature: 19569

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLKNKKVLALVDHDFEDLELWYPVLRLREEGAQVDLIGKEANHKYIGKYGVPVESDFAF
CCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCEECCCCCCCCCCCEE
TDVNDADYDAILVPGGWAPDKLRRFPEVLDMVRNMNQAKKPIGQICHAGWVLISANILNG
ECCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCC
KTVTSTPGIKDDMTNAGATWVDEPVVVDEHLVSSRRPPDLPDYLREFINVLANK
CEECCCCCCCCCCCCCCCCCCCCCEEHHHHHHHCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQLKNKKVLALVDHDFEDLELWYPVLRLREEGAQVDLIGKEANHKYIGKYGVPVESDFAF
CCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCEECCCCCCCCCCCEE
TDVNDADYDAILVPGGWAPDKLRRFPEVLDMVRNMNQAKKPIGQICHAGWVLISANILNG
ECCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCC
KTVTSTPGIKDDMTNAGATWVDEPVVVDEHLVSSRRPPDLPDYLREFINVLANK
CEECCCCCCCCCCCCCCCCCCCCCEEHHHHHHHCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]