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The map label for this gene is ypgR [H]

Identifier: 23097960

GI number: 23097960

Start: 541131

End: 542267

Strand: Reverse

Name: ypgR [H]

Synonym: OB0505

Alternate gene names: 23097960

Gene position: 542267-541131 (Counterclockwise)

Preceding gene: 23097961

Following gene: 23097959

Centisome position: 14.94

GC content: 38.61

Gene sequence:

>1137_bases
ATGAAAATTGTTTCTATTGAACCAACACCTAGCCCACATTCAATGAAGATTAATTTGAGTGAGTCTCTACCTCCAGAAGA
AACGTATAATTATAATGAAAAAGATGATTTGACTAATGCACCTAACTATGTACAGGAATTATTTGCATTAACAGGGGTTA
AAAATATTTACCGTGTGGTAGATTTTATTGCGTTAGCGAGACATCCGAAGACACCGTGGGAAGAATTATTGCCACAAGTA
CGTGAAGTTTTGGGTACAACAGAGGGATTGGAAATTCCAAATATTACACCTTCCACTGAGCAACAAGATGGTTTTGGAGA
AGTCCATGTTTTTATTCAAATGTTCCTTGGTATTCCGATGCAAGTAAAGCTTGAAGAAGATGATGAAGAGAAGCGATTTG
GATTACCTGAGATTTTCACAAATGCCGTCATGGATGCTTCACCAGCATCTACAAATGTAATTATGGATCGTAAGTGGGTG
GAACAACATCCGAGATACGGTAATATAGACGAAATTGGCGAGGAAGTTGTTGAGGAATTAAAAGCTAGCTATGACGAAGA
AAGACTTCAAACACTTGTCAATTTGGCATTCCAAGCGGATAAAACCGAACAAAGTTCTGGATATTATCAAACTGTACCCA
TCGAAAAGATGGATGATCCGAATTGGAAAAATCGCTATGCTGCTTTAGACCGACTAGATCCGACTATCGATGATCTAGAT
CTGTTAGAAAAAGCACTTCACGATGAAAAGTCATCAATTCGACGTCTTGCAACGGCCTACCTTGGCATGATTGAAGATAA
AAAAGTACTACCTTTGCTTTATATAGCGTTAGAAGATAAAGCTATTAATGTAAGACGTACAGCTGGTGATTGTATTTCTG
ACCTTGGATTTGCAGAAGCTACACCAAAAATGATTACGACATTGAAAGATAAAAGCCAATTAGTTCGTTGGCGTGCGGCC
ATGTTTCTATATGAAGTTGGAGATGAATCAGCTATTGCTCCACTTCAAGATGCTGTAGATGACCCTGAATTTGAGGTTAG
AATGCAAATAAATATGGCGCTTGAACGAATTCAAGGTGGCAAGGAAGCCAAAGGATCTGTATGGCACCAAATGACACAAG
CTACGAAAAAAGGCTGA

Upstream 100 bases:

>100_bases
TGGATGAACATTTAGTATCAAGTCGTCGTCCACCAGATCTACCAGATTATTTACGAGAATTTATTAACGTACTAGCAAAT
AAATAGGAGGTATATTGGTT

Downstream 100 bases:

>100_bases
TTATAAAATCAGCCTTTTTTCAGTGAAGTTTCCGCTGTTCTGCAGTAATAGAAAATCAGGGTCTGCAGGCTCTTGAATCG
GACATTTACGTACAGATTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MKIVSIEPTPSPHSMKINLSESLPPEETYNYNEKDDLTNAPNYVQELFALTGVKNIYRVVDFIALARHPKTPWEELLPQV
REVLGTTEGLEIPNITPSTEQQDGFGEVHVFIQMFLGIPMQVKLEEDDEEKRFGLPEIFTNAVMDASPASTNVIMDRKWV
EQHPRYGNIDEIGEEVVEELKASYDEERLQTLVNLAFQADKTEQSSGYYQTVPIEKMDDPNWKNRYAALDRLDPTIDDLD
LLEKALHDEKSSIRRLATAYLGMIEDKKVLPLLYIALEDKAINVRRTAGDCISDLGFAEATPKMITTLKDKSQLVRWRAA
MFLYEVGDESAIAPLQDAVDDPEFEVRMQINMALERIQGGKEAKGSVWHQMTQATKKG

Sequences:

>Translated_378_residues
MKIVSIEPTPSPHSMKINLSESLPPEETYNYNEKDDLTNAPNYVQELFALTGVKNIYRVVDFIALARHPKTPWEELLPQV
REVLGTTEGLEIPNITPSTEQQDGFGEVHVFIQMFLGIPMQVKLEEDDEEKRFGLPEIFTNAVMDASPASTNVIMDRKWV
EQHPRYGNIDEIGEEVVEELKASYDEERLQTLVNLAFQADKTEQSSGYYQTVPIEKMDDPNWKNRYAALDRLDPTIDDLD
LLEKALHDEKSSIRRLATAYLGMIEDKKVLPLLYIALEDKAINVRRTAGDCISDLGFAEATPKMITTLKDKSQLVRWRAA
MFLYEVGDESAIAPLQDAVDDPEFEVRMQINMALERIQGGKEAKGSVWHQMTQATKKG
>Mature_378_residues
MKIVSIEPTPSPHSMKINLSESLPPEETYNYNEKDDLTNAPNYVQELFALTGVKNIYRVVDFIALARHPKTPWEELLPQV
REVLGTTEGLEIPNITPSTEQQDGFGEVHVFIQMFLGIPMQVKLEEDDEEKRFGLPEIFTNAVMDASPASTNVIMDRKWV
EQHPRYGNIDEIGEEVVEELKASYDEERLQTLVNLAFQADKTEQSSGYYQTVPIEKMDDPNWKNRYAALDRLDPTIDDLD
LLEKALHDEKSSIRRLATAYLGMIEDKKVLPLLYIALEDKAINVRRTAGDCISDLGFAEATPKMITTLKDKSQLVRWRAA
MFLYEVGDESAIAPLQDAVDDPEFEVRMQINMALERIQGGKEAKGSVWHQMTQATKKG

Specific function: Unknown

COG id: COG1413

COG function: function code C; FOG: HEAT repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011989
- InterPro:   IPR016024
- InterPro:   IPR014824
- InterPro:   IPR004155 [H]

Pfam domain/function: PF03130 HEAT_PBS; PF08712 Nfu_N [H]

EC number: NA

Molecular weight: Translated: 42951; Mature: 42951

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIVSIEPTPSPHSMKINLSESLPPEETYNYNEKDDLTNAPNYVQELFALTGVKNIYRVV
CEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
DFIALARHPKTPWEELLPQVREVLGTTEGLEIPNITPSTEQQDGFGEVHVFIQMFLGIPM
HHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCE
QVKLEEDDEEKRFGLPEIFTNAVMDASPASTNVIMDRKWVEQHPRYGNIDEIGEEVVEEL
EEEECCCCHHHHCCCHHHHHHHHHCCCCCCCCEEECCHHHHHCCCCCCHHHHHHHHHHHH
KASYDEERLQTLVNLAFQADKTEQSSGYYQTVPIEKMDDPNWKNRYAALDRLDPTIDDLD
HHCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHH
LLEKALHDEKSSIRRLATAYLGMIEDKKVLPLLYIALEDKAINVRRTAGDCISDLGFAEA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEHHHHHHHHHCCCCCC
TPKMITTLKDKSQLVRWRAAMFLYEVGDESAIAPLQDAVDDPEFEVRMQINMALERIQGG
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCEEEEEHHHHHHHHHCCC
KEAKGSVWHQMTQATKKG
CCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKIVSIEPTPSPHSMKINLSESLPPEETYNYNEKDDLTNAPNYVQELFALTGVKNIYRVV
CEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
DFIALARHPKTPWEELLPQVREVLGTTEGLEIPNITPSTEQQDGFGEVHVFIQMFLGIPM
HHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCE
QVKLEEDDEEKRFGLPEIFTNAVMDASPASTNVIMDRKWVEQHPRYGNIDEIGEEVVEEL
EEEECCCCHHHHCCCHHHHHHHHHCCCCCCCCEEECCHHHHHCCCCCCHHHHHHHHHHHH
KASYDEERLQTLVNLAFQADKTEQSSGYYQTVPIEKMDDPNWKNRYAALDRLDPTIDDLD
HHCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHH
LLEKALHDEKSSIRRLATAYLGMIEDKKVLPLLYIALEDKAINVRRTAGDCISDLGFAEA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEHHHHHHHHHCCCCCC
TPKMITTLKDKSQLVRWRAAMFLYEVGDESAIAPLQDAVDDPEFEVRMQINMALERIQGG
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCEEEEEHHHHHHHHHCCC
KEAKGSVWHQMTQATKKG
CCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]