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The map label for this gene is yndE [H]

Identifier: 23097937

GI number: 23097937

Start: 509557

End: 510660

Strand: Reverse

Name: yndE [H]

Synonym: OB0482

Alternate gene names: 23097937

Gene position: 510660-509557 (Counterclockwise)

Preceding gene: 23097938

Following gene: 23097936

Centisome position: 14.07

GC content: 30.8

Gene sequence:

>1104_bases
ATGAGAGTGAAGAGCAGTATTAGTTCTGTAAATTTATTTTTTCTGCTGGTGCAAACGATGATTGGTGTAGGCTTGTTATC
ATTACCTCATCAAACACATGAAGCAGCAGGCAGTGACGGATGGATTTCCATTTTAATTTCTGGATTTTTTATTCAACTAA
TTGTACTGCTTATTTGGTTACTTTGCAGGAATTTCCCCAATCTTACCTTATTTGATTTTTCTAAAGTAATTTTTGGGGAA
ACTTCTGGAACTGTATTAAATTTTTTATATATTATTTACCTGCTCACAGTGATTTGTTATATCTTCATTATATATGTGGA
TAACTTGAAACGATGGATACTCCCTGAAACTCCAGCATGGATATTATTTTTGATAGCATTCGTTCTACTTATTTATGGAA
GTATTTGTAATATAAAAAATTTGGTATCTTTATTTTCTTTACTATTCATATTCATTCTGTTTTTATTCTTCATTACGTTT
TTGGTTTATGGTGATCCAAACATAGATGTTCGCTATCTCTTCCCTATTGGTTCCAGTGGTGGATGGAATATTCTTAAAAG
CACTAGTGACTCAATGATATCCTTCATAGGGTTTGAAACATTACTTATTTATTTTGCTTTTATAAAGCAATCTAAAACTA
TTTCAGCACTGAAAGGAGTTTTTTTAGCAGTATTATTTGTAACCATTTTTTTAACGTATATTGTGATTCTAAGTACCGTA
ATGCTTAGTCCTGAAGAAATAAAAAACACGCCGGAACCGGTTCTATATATACTAAGTGCGATGGAAATAAGAATTTTAAG
CCGATTAGATTTAATATTTCTTTCTTTCTGGGGTCTGATAGTTTTTACTACTATTATTAGCTACACCTTTTCAGCAAGTA
TGGGAATAAGTAAATTAATCCATATCAAACATAAATTTGCTGTGATACTATCTGGAACATTCGTCCTTATCGTTTCGATA
ATATTTTATTATATGGAGATTACCTTACTTGAAAAATGGTTAAAGCATTTAAGTTTAGTTTTCGGCATTATTATCCCTAT
CCTACTGCTTTTAATAACAATTATTTTTAAAAGAGAGGCGGCATCGACCTATGAGAAAAACTGA

Upstream 100 bases:

>100_bases
AAAGATACTATCATTCGTGTTCCTTCTTGGATGATGTATAAACACTCCAAAAATTCTTCTCATTATAAGCAAGAAAAACG
ATCAAGGAAGTGGAAACTAG

Downstream 100 bases:

>100_bases
GCTCTTCTTGATCTTCTTTATTCTTCCATTACTAGCTGGGTGCTGGGATGAAAGATTTCTAAAGAATTCCCGTACTGTGT
ATTTATCAGGTTTTGACTTG

Product: spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MRVKSSISSVNLFFLLVQTMIGVGLLSLPHQTHEAAGSDGWISILISGFFIQLIVLLIWLLCRNFPNLTLFDFSKVIFGE
TSGTVLNFLYIIYLLTVICYIFIIYVDNLKRWILPETPAWILFLIAFVLLIYGSICNIKNLVSLFSLLFIFILFLFFITF
LVYGDPNIDVRYLFPIGSSGGWNILKSTSDSMISFIGFETLLIYFAFIKQSKTISALKGVFLAVLFVTIFLTYIVILSTV
MLSPEEIKNTPEPVLYILSAMEIRILSRLDLIFLSFWGLIVFTTIISYTFSASMGISKLIHIKHKFAVILSGTFVLIVSI
IFYYMEITLLEKWLKHLSLVFGIIIPILLLLITIIFKREAASTYEKN

Sequences:

>Translated_367_residues
MRVKSSISSVNLFFLLVQTMIGVGLLSLPHQTHEAAGSDGWISILISGFFIQLIVLLIWLLCRNFPNLTLFDFSKVIFGE
TSGTVLNFLYIIYLLTVICYIFIIYVDNLKRWILPETPAWILFLIAFVLLIYGSICNIKNLVSLFSLLFIFILFLFFITF
LVYGDPNIDVRYLFPIGSSGGWNILKSTSDSMISFIGFETLLIYFAFIKQSKTISALKGVFLAVLFVTIFLTYIVILSTV
MLSPEEIKNTPEPVLYILSAMEIRILSRLDLIFLSFWGLIVFTTIISYTFSASMGISKLIHIKHKFAVILSGTFVLIVSI
IFYYMEITLLEKWLKHLSLVFGIIIPILLLLITIIFKREAASTYEKN
>Mature_367_residues
MRVKSSISSVNLFFLLVQTMIGVGLLSLPHQTHEAAGSDGWISILISGFFIQLIVLLIWLLCRNFPNLTLFDFSKVIFGE
TSGTVLNFLYIIYLLTVICYIFIIYVDNLKRWILPETPAWILFLIAFVLLIYGSICNIKNLVSLFSLLFIFILFLFFITF
LVYGDPNIDVRYLFPIGSSGGWNILKSTSDSMISFIGFETLLIYFAFIKQSKTISALKGVFLAVLFVTIFLTYIVILSTV
MLSPEEIKNTPEPVLYILSAMEIRILSRLDLIFLSFWGLIVFTTIISYTFSASMGISKLIHIKHKFAVILSGTFVLIVSI
IFYYMEITLLEKWLKHLSLVFGIIIPILLLLITIIFKREAASTYEKN

Specific function: Involved in the germinative response to L-alanine. Could be an amino acid transporter [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002293
- InterPro:   IPR004761 [H]

Pfam domain/function: PF03845 Spore_permease [H]

EC number: NA

Molecular weight: Translated: 41853; Mature: 41853

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVKSSISSVNLFFLLVQTMIGVGLLSLPHQTHEAAGSDGWISILISGFFIQLIVLLIWL
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
LCRNFPNLTLFDFSKVIFGETSGTVLNFLYIIYLLTVICYIFIIYVDNLKRWILPETPAW
HHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
ILFLIAFVLLIYGSICNIKNLVSLFSLLFIFILFLFFITFLVYGDPNIDVRYLFPIGSSG
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC
GWNILKSTSDSMISFIGFETLLIYFAFIKQSKTISALKGVFLAVLFVTIFLTYIVILSTV
CCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLSPEEIKNTPEPVLYILSAMEIRILSRLDLIFLSFWGLIVFTTIISYTFSASMGISKLI
HCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HIKHKFAVILSGTFVLIVSIIFYYMEITLLEKWLKHLSLVFGIIIPILLLLITIIFKREA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASTYEKN
HHCCCCC
>Mature Secondary Structure
MRVKSSISSVNLFFLLVQTMIGVGLLSLPHQTHEAAGSDGWISILISGFFIQLIVLLIWL
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
LCRNFPNLTLFDFSKVIFGETSGTVLNFLYIIYLLTVICYIFIIYVDNLKRWILPETPAW
HHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
ILFLIAFVLLIYGSICNIKNLVSLFSLLFIFILFLFFITFLVYGDPNIDVRYLFPIGSSG
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC
GWNILKSTSDSMISFIGFETLLIYFAFIKQSKTISALKGVFLAVLFVTIFLTYIVILSTV
CCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLSPEEIKNTPEPVLYILSAMEIRILSRLDLIFLSFWGLIVFTTIISYTFSASMGISKLI
HCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HIKHKFAVILSGTFVLIVSIIFYYMEITLLEKWLKHLSLVFGIIIPILLLLITIIFKREA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASTYEKN
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]