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The map label for this gene is tnpR [H]

Identifier: 23097627

GI number: 23097627

Start: 182934

End: 183128

Strand: Direct

Name: tnpR [H]

Synonym: OB0172

Alternate gene names: 23097627

Gene position: 182934-183128 (Clockwise)

Preceding gene: 23097625

Following gene: 23097628

Centisome position: 5.04

GC content: 32.82

Gene sequence:

>195_bases
GTGATTTTTGGATATGCGAGAGTCAGTACAAAAGACCAAAATTTAAATCGCCAAATAAAAGAGTTAGAGAATTTCGGATG
TGATCGCATTTATCGAGAAAAGCAATCTGGTAAAAACTTTGATTGTCCTGTTTATAAAGAAATGCGTTCCAAATTACGAT
TTGGAGATGTATGGGTTGTATATGATTTAAGTTGA

Upstream 100 bases:

>100_bases
GTCCAATAAGAGTACACTCTGTCCAAACAGATGGAAATGTAGTACTATCAATGCATATAAGTGTTAAAACAGACTTGTTC
AAATAATTGGATGTGAGAAT

Downstream 100 bases:

>100_bases
TCATACCTGTTGTACATATGGTAATGGTGATATCTATAACTAAAGAGGACACGACATTTAGAATTGTTTAGAGATCTGAG
TGGAAATAAGAAACTCAGGT

Product: truncated resolvase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 64; Mature: 64

Protein sequence:

>64_residues
MIFGYARVSTKDQNLNRQIKELENFGCDRIYREKQSGKNFDCPVYKEMRSKLRFGDVWVVYDLS

Sequences:

>Translated_64_residues
MIFGYARVSTKDQNLNRQIKELENFGCDRIYREKQSGKNFDCPVYKEMRSKLRFGDVWVVYDLS
>Mature_64_residues
MIFGYARVSTKDQNLNRQIKELENFGCDRIYREKQSGKNFDCPVYKEMRSKLRFGDVWVVYDLS

Specific function: Resolvase catalyzes the resolution (a site-specific recombination) of the cointegrated replicon to yield the final transposition products [H]

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the site-specific recombinase resolvase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006118
- InterPro:   IPR006119
- InterPro:   IPR006120 [H]

Pfam domain/function: PF02796 HTH_7; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 7687; Mature: 7687

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: PS00397 RECOMBINASES_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFGYARVSTKDQNLNRQIKELENFGCDRIYREKQSGKNFDCPVYKEMRSKLRFGDVWVV
CEECCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEE
YDLS
EECC
>Mature Secondary Structure
MIFGYARVSTKDQNLNRQIKELENFGCDRIYREKQSGKNFDCPVYKEMRSKLRFGDVWVV
CEECCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEE
YDLS
EECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2997130 [H]