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The map label for this gene is ybaF [H]

Identifier: 23097604

GI number: 23097604

Start: 158015

End: 158812

Strand: Direct

Name: ybaF [H]

Synonym: OB0149

Alternate gene names: 23097604

Gene position: 158015-158812 (Clockwise)

Preceding gene: 23097603

Following gene: 23097605

Centisome position: 4.35

GC content: 37.09

Gene sequence:

>798_bases
ATGAATAATGCTTTAATTATTGGGCAATACGTTCCAGGCAACTCCATCGTGCATCGTTTAGATCCACGTACCAAAATAAC
GATCGTATTCTTTTTTGTTTTTATCGTGTTTTTTGCCAATAATGTTCCGAGTTACAGTTTATTAACGGTGTTTGCACTTT
TATGTATGTTTTCCTCACGAGTACCAATACGATTTGTCGCAAAAGGATTAATACCAGTTTGGTTTTTAATTGTTTTTACA
TTTATTCTACACTTATTCGTGACAAAGGAAGGTACGTTGCTTTTTGAGTTTTGGTTTATAGAAATCTATTCAGGTGGGCT
TATTCAAGGTTTTGCGATTTCTTTACGATTCTTTTTATTGATATTAGTAACGTCATTACTAACACTAACGACGACGCCTA
TTGAGATTACAGATGCTGTAGAAGATATGCTTGCCCCATTGAAAAAAGTAAGGTTTCCCGTACATGAACTAGCGTTAATG
ATGTCTATTTCATTGCGATTTATCCCAACGTTAATGCAAGAGACAGATAAAATCTCACGTGCACAAGCATCACGTGGTGT
TGACTTTCGTACAGGCCCGATTAAAGATCGTGTGATGGCGGTTATTCCTTTACTTGTTCCGTTATTTGTAAGTGCATTTA
AGCGTGCAGAAGAGCTTGCAATGGCGATGGAAGCACGCGGCTATCAAGGAGGCGAAGGTCGTAGTAAATTACGTGAACTA
ACGATTGGACCTAAGGATATTAGTATTATGGTTAGCTTTGCAATTGTCATAATAGCTTTATTCTTACTGAGAAAGTAG

Upstream 100 bases:

>100_bases
GATAAATACAATCATCGTTTTCATGATAATCTCATTTATCAAAACGAGTCTATTGTTGATATAGCTGCAGAGATGAAGCG
TCGATTGGACGGTGGTCAAC

Downstream 100 bases:

>100_bases
ATTAGGGAAAGAAAGAGGTTGAAGTAAGTGGAAAGATTAAAATGCACCGTATCGTATGATGGATCTGATTTTGCCGGATT
CCAAGTACAACCAGATCACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MNNALIIGQYVPGNSIVHRLDPRTKITIVFFFVFIVFFANNVPSYSLLTVFALLCMFSSRVPIRFVAKGLIPVWFLIVFT
FILHLFVTKEGTLLFEFWFIEIYSGGLIQGFAISLRFFLLILVTSLLTLTTTPIEITDAVEDMLAPLKKVRFPVHELALM
MSISLRFIPTLMQETDKISRAQASRGVDFRTGPIKDRVMAVIPLLVPLFVSAFKRAEELAMAMEARGYQGGEGRSKLREL
TIGPKDISIMVSFAIVIIALFLLRK

Sequences:

>Translated_265_residues
MNNALIIGQYVPGNSIVHRLDPRTKITIVFFFVFIVFFANNVPSYSLLTVFALLCMFSSRVPIRFVAKGLIPVWFLIVFT
FILHLFVTKEGTLLFEFWFIEIYSGGLIQGFAISLRFFLLILVTSLLTLTTTPIEITDAVEDMLAPLKKVRFPVHELALM
MSISLRFIPTLMQETDKISRAQASRGVDFRTGPIKDRVMAVIPLLVPLFVSAFKRAEELAMAMEARGYQGGEGRSKLREL
TIGPKDISIMVSFAIVIIALFLLRK
>Mature_265_residues
MNNALIIGQYVPGNSIVHRLDPRTKITIVFFFVFIVFFANNVPSYSLLTVFALLCMFSSRVPIRFVAKGLIPVWFLIVFT
FILHLFVTKEGTLLFEFWFIEIYSGGLIQGFAISLRFFLLILVTSLLTLTTTPIEITDAVEDMLAPLKKVRFPVHELALM
MSISLRFIPTLMQETDKISRAQASRGVDFRTGPIKDRVMAVIPLLVPLFVSAFKRAEELAMAMEARGYQGGEGRSKLREL
TIGPKDISIMVSFAIVIIALFLLRK

Specific function: Unknown

COG id: COG0619

COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003339 [H]

Pfam domain/function: PF02361 CbiQ [H]

EC number: NA

Molecular weight: Translated: 29933; Mature: 29933

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNALIIGQYVPGNSIVHRLDPRTKITIVFFFVFIVFFANNVPSYSLLTVFALLCMFSSR
CCCCEEEEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
VPIRFVAKGLIPVWFLIVFTFILHLFVTKEGTLLFEFWFIEIYSGGLIQGFAISLRFFLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHCCCCHHHHHHHHHHHHH
ILVTSLLTLTTTPIEITDAVEDMLAPLKKVRFPVHELALMMSISLRFIPTLMQETDKISR
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQASRGVDFRTGPIKDRVMAVIPLLVPLFVSAFKRAEELAMAMEARGYQGGEGRSKLREL
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
TIGPKDISIMVSFAIVIIALFLLRK
CCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNNALIIGQYVPGNSIVHRLDPRTKITIVFFFVFIVFFANNVPSYSLLTVFALLCMFSSR
CCCCEEEEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
VPIRFVAKGLIPVWFLIVFTFILHLFVTKEGTLLFEFWFIEIYSGGLIQGFAISLRFFLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHCCCCHHHHHHHHHHHHH
ILVTSLLTLTTTPIEITDAVEDMLAPLKKVRFPVHELALMMSISLRFIPTLMQETDKISR
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQASRGVDFRTGPIKDRVMAVIPLLVPLFVSAFKRAEELAMAMEARGYQGGEGRSKLREL
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
TIGPKDISIMVSFAIVIIALFLLRK
CCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]