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The map label for this gene is yabB [H]

Identifier: 23097497

GI number: 23097497

Start: 42851

End: 43591

Strand: Direct

Name: yabB [H]

Synonym: OB0042

Alternate gene names: 23097497

Gene position: 42851-43591 (Clockwise)

Preceding gene: 23097496

Following gene: 23097498

Centisome position: 1.18

GC content: 36.3

Gene sequence:

>741_bases
ATGGTAGAACTTTATGATGATGAACGAACAGATTATTTATTAGCAAATAATGAAATGAAGATAATTCAAAGTCCAACAGC
ATTTGCATTCTCTTTAGATGCTGTATTACTTGCTGATTTTGCATCGATTCCTAAAAAAAGAGGTGCGATATTAGATTTAT
GTACGGGGAATGGAGTGATTCCTTTACTGTTATCACGCAAAACAACAGCAAAGATCACAGGAGTGGAGATACAAGATCGC
ATCTATAGTATGGCTGAACGGAATGTGAAGTTAAATCAATTACAGTCACAATTACATATGATTCATGGAGATTTAAAAGA
AATGCAAGCAGTACTTGGACAAAGCAGTTTTGATATGGTTACCTGTAATCCACCTTATTTTAAAACCCCTTCCAAAACAG
AACATAATGTAAACGAACATTTAACGATTGCTCGACACGAAGTGCACTGTACCTTAGAGGATGTGGTACGCGCATGTAAA
TTACATGTACGTCCAGGTGGGAAAGTAGCAATGGTGCATCGTCCAGGCAGGTTAGTTGATATTATAGAGCTGTTTAGAAA
ATATAAAATTGAACCAAAACGAATCCAATTTATATATCCGAAGCAAGGGAAAGAGGCAAATATGCTATTGATCGAAGGAA
TTCGAGATGGAAAAGCAGACATAAAGATTTTACCGCCTCTATACATCTATGAAAGTGATGGAACCTATACGAAACAGGCG
GAGGAAATTATTTATGGATGA

Upstream 100 bases:

>100_bases
GTACTATGCAGGTGCAGTTGCTAAGAATAGTCAACTAATGTGGAGATAGCCCTTCTTCGTTTTTATGAAATCGAACAAGA
CAGGATAAAGAGGGATCACT

Downstream 100 bases:

>100_bases
ACAGCATTATGTTTATATATTACGTTGCCGTGATCAATCTTTATATACGGGATATACGAATAATCTAGAGCATCGTCTAC
AAATGCATGAAACGGGGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MVELYDDERTDYLLANNEMKIIQSPTAFAFSLDAVLLADFASIPKKRGAILDLCTGNGVIPLLLSRKTTAKITGVEIQDR
IYSMAERNVKLNQLQSQLHMIHGDLKEMQAVLGQSSFDMVTCNPPYFKTPSKTEHNVNEHLTIARHEVHCTLEDVVRACK
LHVRPGGKVAMVHRPGRLVDIIELFRKYKIEPKRIQFIYPKQGKEANMLLIEGIRDGKADIKILPPLYIYESDGTYTKQA
EEIIYG

Sequences:

>Translated_246_residues
MVELYDDERTDYLLANNEMKIIQSPTAFAFSLDAVLLADFASIPKKRGAILDLCTGNGVIPLLLSRKTTAKITGVEIQDR
IYSMAERNVKLNQLQSQLHMIHGDLKEMQAVLGQSSFDMVTCNPPYFKTPSKTEHNVNEHLTIARHEVHCTLEDVVRACK
LHVRPGGKVAMVHRPGRLVDIIELFRKYKIEPKRIQFIYPKQGKEANMLLIEGIRDGKADIKILPPLYIYESDGTYTKQA
EEIIYG
>Mature_246_residues
MVELYDDERTDYLLANNEMKIIQSPTAFAFSLDAVLLADFASIPKKRGAILDLCTGNGVIPLLLSRKTTAKITGVEIQDR
IYSMAERNVKLNQLQSQLHMIHGDLKEMQAVLGQSSFDMVTCNPPYFKTPSKTEHNVNEHLTIARHEVHCTLEDVVRACK
LHVRPGGKVAMVHRPGRLVDIIELFRKYKIEPKRIQFIYPKQGKEANMLLIEGIRDGKADIKILPPLYIYESDGTYTKQA
EEIIYG

Specific function: Unknown

COG id: COG4123

COG function: function code R; Predicted O-methyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS [H]

EC number: NA

Molecular weight: Translated: 27912; Mature: 27912

Theoretical pI: Translated: 7.99; Mature: 7.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVELYDDERTDYLLANNEMKIIQSPTAFAFSLDAVLLADFASIPKKRGAILDLCTGNGVI
CCEEECCCCCCEEEECCCEEEEECCCEEEEEHHHHHHHHHHHCCCCCCCEEEEECCCCEE
PLLLSRKTTAKITGVEIQDRIYSMAERNVKLNQLQSQLHMIHGDLKEMQAVLGQSSFDMV
EEEECCCCEEEEECEEHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEE
TCNPPYFKTPSKTEHNVNEHLTIARHEVHCTLEDVVRACKLHVRPGGKVAMVHRPGRLVD
ECCCCCCCCCCCCCCCCCCCEEEEEEEEEEEHHHHHHHHEEEECCCCCEEEEECCCCHHH
IIELFRKYKIEPKRIQFIYPKQGKEANMLLIEGIRDGKADIKILPPLYIYESDGTYTKQA
HHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCEEECCEEEEEECCCCCHHHH
EEIIYG
HHHHCC
>Mature Secondary Structure
MVELYDDERTDYLLANNEMKIIQSPTAFAFSLDAVLLADFASIPKKRGAILDLCTGNGVI
CCEEECCCCCCEEEECCCEEEEECCCEEEEEHHHHHHHHHHHCCCCCCCEEEEECCCCEE
PLLLSRKTTAKITGVEIQDRIYSMAERNVKLNQLQSQLHMIHGDLKEMQAVLGQSSFDMV
EEEECCCCEEEEECEEHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEE
TCNPPYFKTPSKTEHNVNEHLTIARHEVHCTLEDVVRACKLHVRPGGKVAMVHRPGRLVD
ECCCCCCCCCCCCCCCCCCCEEEEEEEEEEEHHHHHHHHEEEECCCCCEEEEECCCCHHH
IIELFRKYKIEPKRIQFIYPKQGKEANMLLIEGIRDGKADIKILPPLYIYESDGTYTKQA
HHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCEEECCEEEEEECCCCCHHHH
EEIIYG
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]