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The map label for this gene is 23097496

Identifier: 23097496

GI number: 23097496

Start: 42211

End: 42573

Strand: Direct

Name: 23097496

Synonym: OB0041

Alternate gene names: NA

Gene position: 42211-42573 (Clockwise)

Preceding gene: 23097495

Following gene: 23097497

Centisome position: 1.16

GC content: 33.06

Gene sequence:

>363_bases
GTGGGAAACAGAGAAATATTTGATCAGGTTTCCGACATGGAAAAGCAAATTGGAGAGCTATATGAACAGCTAGGAGATTT
AAAAGTAAAGTTAAGTGATTTACTGGAAGAAAATCATCGATTAGCACATGAAAATCATCATTTACGCCATCATCTAGAAG
AGTATAGACAAGATGGAGATACTGATTCAAAACAACCATTAAATGAAACAAAGAAAAAACATCATACTCTTCCTGGGGAA
GGATATGATAACTTAGCAAGATTGTATGAGGAAGGATTTCATATTTGTAACCTTGAATTTGGAAGTCCACGCAGAAATGA
AGATTGCATCTTTTGTTTAGATTTCTTTGATAAAACGAAATAA

Upstream 100 bases:

>100_bases
TTGAGTTACCTGAAAAAGATCGCGTGGTAGAATATACATTAGATGAATTAATTGAAGAAGGAATAGTTGCGCAAGCCACA
GAATGATGAGGTGAGTGGGC

Downstream 100 bases:

>100_bases
TACTATCTTAAGTAAGAAGGATATGATCTGATCTTTCTTGATAAGCATTTTACAGGGCTGTCTCTAGCTTAGTGATTACA
TTTTTTAGTAACGGGATGTT

Product: DNA replication intiation control protein YabA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MGNREIFDQVSDMEKQIGELYEQLGDLKVKLSDLLEENHRLAHENHHLRHHLEEYRQDGDTDSKQPLNETKKKHHTLPGE
GYDNLARLYEEGFHICNLEFGSPRRNEDCIFCLDFFDKTK

Sequences:

>Translated_120_residues
MGNREIFDQVSDMEKQIGELYEQLGDLKVKLSDLLEENHRLAHENHHLRHHLEEYRQDGDTDSKQPLNETKKKHHTLPGE
GYDNLARLYEEGFHICNLEFGSPRRNEDCIFCLDFFDKTK
>Mature_119_residues
GNREIFDQVSDMEKQIGELYEQLGDLKVKLSDLLEENHRLAHENHHLRHHLEEYRQDGDTDSKQPLNETKKKHHTLPGEG
YDNLARLYEEGFHICNLEFGSPRRNEDCIFCLDFFDKTK

Specific function: Involved in initiation control of chromosome replication

COG id: COG4467

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yabA family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YABA_OCEIH (Q8EU48)

Other databases:

- EMBL:   BA000028
- RefSeq:   NP_690962.1
- GeneID:   1015087
- GenomeReviews:   BA000028_GR
- KEGG:   oih:OB0041
- NMPDR:   fig|221109.1.peg.41
- HOGENOM:   HBG514867
- OMA:   VHYGSVR
- ProtClustDB:   PRK13169
- BioCyc:   OIHE221109:OB0041-MONOMER
- HAMAP:   MF_01159
- InterPro:   IPR010377
- PIRSF:   PIRSF021439

Pfam domain/function: PF06156 DUF972

EC number: NA

Molecular weight: Translated: 14240; Mature: 14109

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNREIFDQVSDMEKQIGELYEQLGDLKVKLSDLLEENHRLAHENHHLRHHLEEYRQDGD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TDSKQPLNETKKKHHTLPGEGYDNLARLYEEGFHICNLEFGSPRRNEDCIFCLDFFDKTK
CCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCEEEEECCCCCCC
>Mature Secondary Structure 
GNREIFDQVSDMEKQIGELYEQLGDLKVKLSDLLEENHRLAHENHHLRHHLEEYRQDGD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TDSKQPLNETKKKHHTLPGEGYDNLARLYEEGFHICNLEFGSPRRNEDCIFCLDFFDKTK
CCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12235376