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The map label for this gene is yaaH [H]

Identifier: 23097479

GI number: 23097479

Start: 28261

End: 29550

Strand: Reverse

Name: yaaH [H]

Synonym: OB0024

Alternate gene names: 23097479

Gene position: 29550-28261 (Counterclockwise)

Preceding gene: 23097480

Following gene: 23097474

Centisome position: 0.81

GC content: 39.15

Gene sequence:

>1290_bases
TTGCAAATTCACGTTGTGCAACAAGGAGATAGTGTATATCAAATTGCTAATACATACGAATCTTCCGTCGCTGATATTAT
TGAAGCAAATGATTTAACTTCTCCTAATGCACTTGTTATTGGGCAAGCACTTGTTATTCCAATTGTTGGCCAATTTTATT
TTGTTCAACCTGGTGATACGTTAACTTCTATTGCGAATCAATTTGGTTTTACCGTACAGGAAATTGCACGAATAAATGGC
ATATCAATAAATCAAACATTGTCTCCTGGTATGCGGATTTATATTCCACCGATTGAAAAACGCCCCATCACCTCTTATGC
TTATGTAGAACCCTTCGGTGATACAGTATCCCAAACACTAGAAACTGCTGCAGAAAATAGAACTCCATACTTAACCTACC
TTGCACTATTTAGTTATCAAGTAAACAGAGATGGAACATTGAAGGCTCCTCCAGCTGGCAATTTATTTCAAACAGCCAAC
GCAAATGATACAGCAATGGCAATGGTTATAACTAATTTGGAAGAGGGCGCGTTTAGTGATGAGCTCGGGCATATTATCGT
TACCGTAAGTGCTGTACAAAATACATTGCTAACGGAAATTATTAATACAGCACTTCAACAAGGTTTTAGAGACGTACATT
TTGATCTTGAATTTTTGCCGGGAGAAGATCGTGAAGCCTATAATCAATTTCTTCGAACTGCAAAAGCTCGCCTATCACAG
GAAGGCTTACTTGTTTCCACTGCGCTCGCACCTAAAACAAGTGATACGCAGTCTGGACAATGGTATGAAGCACATGACTA
TGCTGCACATGGAGAAATAGTAGATTTTGTTGTTCTTATGACGTATGAATGGGGATATAGCTACGGTCCTCCAATGGCGG
TTTCACCATTGAATTCGGTCCGTAATGTAATTGAATATGCCGTTTCGGCTATTCCACCGGAAAAGATATTAATGGGACAA
AATTTATATGGGTACGATTGGACACTCCCATTTGTAGAAGGTGGTGGACCAGCTCGAGCAGTGAGTCCACAACAAGCAAT
ACAAATTGCTATCGAAAATAATGCTGCTATTCAATTTGATCCGGTAGCTCAAGCACCTTTTTTCACATACACAGACAATT
CTGGAGCAAATCATGAAGTGTGGTTTGAGGATGCTCGATCGATACAAGGTAAATTCGATTTAATTCGTGAATTTAACTTG
CTTGGAATTGCTTATTGGAAGCTTGGGTTAGCCTTTCCGCAAAACTGGTTACTACTCAACGATCAATTTACCATCACCAA
ATTAGAATAA

Upstream 100 bases:

>100_bases
ATGGAATCCGTCATGGATGCAGATATATCTCCAATTTAGCATAATGCATTTACCCTCCTCATATAGATAGTTAGAGACTC
TATGTAAGGAGGTAGTTCCT

Downstream 100 bases:

>100_bases
GAGAACAAAAATGTAAATATTCGAGTCAATTTCATAACTGCTGAATTCAATCTAAAAGCGAACGTTTAGTGGTAATTATA
TTTAATGTTCGGATTACAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MQIHVVQQGDSVYQIANTYESSVADIIEANDLTSPNALVIGQALVIPIVGQFYFVQPGDTLTSIANQFGFTVQEIARING
ISINQTLSPGMRIYIPPIEKRPITSYAYVEPFGDTVSQTLETAAENRTPYLTYLALFSYQVNRDGTLKAPPAGNLFQTAN
ANDTAMAMVITNLEEGAFSDELGHIIVTVSAVQNTLLTEIINTALQQGFRDVHFDLEFLPGEDREAYNQFLRTAKARLSQ
EGLLVSTALAPKTSDTQSGQWYEAHDYAAHGEIVDFVVLMTYEWGYSYGPPMAVSPLNSVRNVIEYAVSAIPPEKILMGQ
NLYGYDWTLPFVEGGGPARAVSPQQAIQIAIENNAAIQFDPVAQAPFFTYTDNSGANHEVWFEDARSIQGKFDLIREFNL
LGIAYWKLGLAFPQNWLLLNDQFTITKLE

Sequences:

>Translated_429_residues
MQIHVVQQGDSVYQIANTYESSVADIIEANDLTSPNALVIGQALVIPIVGQFYFVQPGDTLTSIANQFGFTVQEIARING
ISINQTLSPGMRIYIPPIEKRPITSYAYVEPFGDTVSQTLETAAENRTPYLTYLALFSYQVNRDGTLKAPPAGNLFQTAN
ANDTAMAMVITNLEEGAFSDELGHIIVTVSAVQNTLLTEIINTALQQGFRDVHFDLEFLPGEDREAYNQFLRTAKARLSQ
EGLLVSTALAPKTSDTQSGQWYEAHDYAAHGEIVDFVVLMTYEWGYSYGPPMAVSPLNSVRNVIEYAVSAIPPEKILMGQ
NLYGYDWTLPFVEGGGPARAVSPQQAIQIAIENNAAIQFDPVAQAPFFTYTDNSGANHEVWFEDARSIQGKFDLIREFNL
LGIAYWKLGLAFPQNWLLLNDQFTITKLE
>Mature_429_residues
MQIHVVQQGDSVYQIANTYESSVADIIEANDLTSPNALVIGQALVIPIVGQFYFVQPGDTLTSIANQFGFTVQEIARING
ISINQTLSPGMRIYIPPIEKRPITSYAYVEPFGDTVSQTLETAAENRTPYLTYLALFSYQVNRDGTLKAPPAGNLFQTAN
ANDTAMAMVITNLEEGAFSDELGHIIVTVSAVQNTLLTEIINTALQQGFRDVHFDLEFLPGEDREAYNQFLRTAKARLSQ
EGLLVSTALAPKTSDTQSGQWYEAHDYAAHGEIVDFVVLMTYEWGYSYGPPMAVSPLNSVRNVIEYAVSAIPPEKILMGQ
NLYGYDWTLPFVEGGGPARAVSPQQAIQIAIENNAAIQFDPVAQAPFFTYTDNSGANHEVWFEDARSIQGKFDLIREFNL
LGIAYWKLGLAFPQNWLLLNDQFTITKLE

Specific function: May be required for the L-alanine-stimulated germination pathway [H]

COG id: COG3858

COG function: function code R; Predicted glycosyl hydrolase

Gene ontology:

Cell location: Spore wall (Probable). Note=Probably localized either on the surface of the outer spore membrane and/or in the inner spore coat [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 LysM repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011583
- InterPro:   IPR001223
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF00704 Glyco_hydro_18; PF01476 LysM [H]

EC number: NA

Molecular weight: Translated: 47478; Mature: 47478

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIHVVQQGDSVYQIANTYESSVADIIEANDLTSPNALVIGQALVIPIVGQFYFVQPGDT
CEEEEEECCCCEEHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHEEEEECEEEEECCCCH
LTSIANQFGFTVQEIARINGISINQTLSPGMRIYIPPIEKRPITSYAYVEPFGDTVSQTL
HHHHHHHHCCCHHHHHHHCCCEECCCCCCCCEEEECCCCCCCCCCEEEECCCHHHHHHHH
ETAAENRTPYLTYLALFSYQVNRDGTLKAPPAGNLFQTANANDTAMAMVITNLEEGAFSD
HHHHHCCCCCEEEEEEHHEEECCCCCEECCCCCCCEEECCCCCCEEEEEEECCCCCCCCC
ELGHIIVTVSAVQNTLLTEIINTALQQGFRDVHFDLEFLPGEDREAYNQFLRTAKARLSQ
CCCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCC
EGLLVSTALAPKTSDTQSGQWYEAHDYAAHGEIVDFVVLMTYEWGYSYGPPMAVSPLNSV
CCCEEEEECCCCCCCCCCCCCEECCCCCCCCHHHEEEEEEEEECCCCCCCCCEECCHHHH
RNVIEYAVSAIPPEKILMGQNLYGYDWTLPFVEGGGPARAVSPQQAIQIAIENNAAIQFD
HHHHHHHHHCCCHHHHEECCCCCCCEEEEEEEECCCCCCCCCHHHEEEEEEECCCEEEEC
PVAQAPFFTYTDNSGANHEVWFEDARSIQGKFDLIREFNLLGIAYWKLGLAFPQNWLLLN
CCCCCCEEEEECCCCCCCEEEEHHHHHCCCHHHHHHHHHHHEEEEHHHHHCCCCCEEEEC
DQFTITKLE
CCEEEEEEC
>Mature Secondary Structure
MQIHVVQQGDSVYQIANTYESSVADIIEANDLTSPNALVIGQALVIPIVGQFYFVQPGDT
CEEEEEECCCCEEHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHEEEEECEEEEECCCCH
LTSIANQFGFTVQEIARINGISINQTLSPGMRIYIPPIEKRPITSYAYVEPFGDTVSQTL
HHHHHHHHCCCHHHHHHHCCCEECCCCCCCCEEEECCCCCCCCCCEEEECCCHHHHHHHH
ETAAENRTPYLTYLALFSYQVNRDGTLKAPPAGNLFQTANANDTAMAMVITNLEEGAFSD
HHHHHCCCCCEEEEEEHHEEECCCCCEECCCCCCCEEECCCCCCEEEEEEECCCCCCCCC
ELGHIIVTVSAVQNTLLTEIINTALQQGFRDVHFDLEFLPGEDREAYNQFLRTAKARLSQ
CCCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCC
EGLLVSTALAPKTSDTQSGQWYEAHDYAAHGEIVDFVVLMTYEWGYSYGPPMAVSPLNSV
CCCEEEEECCCCCCCCCCCCCEECCCCCCCCHHHEEEEEEEEECCCCCCCCCEECCHHHH
RNVIEYAVSAIPPEKILMGQNLYGYDWTLPFVEGGGPARAVSPQQAIQIAIENNAAIQFD
HHHHHHHHHCCCHHHHEECCCCCCCEEEEEEEECCCCCCCCCHHHEEEEEEECCCEEEEC
PVAQAPFFTYTDNSGANHEVWFEDARSIQGKFDLIREFNLLGIAYWKLGLAFPQNWLLLN
CCCCCCEEEEECCCCCCCEEEEHHHHHCCCHHHHHHHHHHHEEEEHHHHHCCCCCEEEEC
DQFTITKLE
CCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377; 10419957 [H]