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The map label for this gene is yeaV [H]

Identifier: 161501982

GI number: 161501982

Start: 744126

End: 745724

Strand: Reverse

Name: yeaV [H]

Synonym: OB0704

Alternate gene names: 161501982

Gene position: 745724-744126 (Counterclockwise)

Preceding gene: 23098161

Following gene: 23098148

Centisome position: 20.54

GC content: 37.71

Gene sequence:

>1599_bases
ATGATGAACAAACGTTTAATAGATTGGCCAACATTTATAGGAGCATTACTTATATTACTCACTGTGGTAATTCCGTTAAT
TTTATTTCCGAAAGCTGGCTCAGAAGTAATAAATTCTGCAAACCGATTTGTAACAGGTAACTTTGGTATCTTGTATCTCA
TCTTAGGATTGAGTGCTTTGATATTTATCTTATTCGTTGCTTTCAGTAGAAATGGCAGGATTAAACTAGGTGGAAGAGAC
GTAAAAAAAGAGTTTGGTACCTTTTCCTGGGCAGCGATGCTTTTCTCTGCAGGTATAGGTTCTAGTATTCTTTACTGGGC
AATGATTGAGTGGGCATTCTATTATCAGGGCCCACCATTTGGAATTACTCCCGAATCAGAAGAAGCAATCAATTGGGCGG
CATCCTATGGTATTTTCCACTGGGGACCAATAGCCTGGGCATTATACACATTACCCGCTTTACCTATCGCATATTTCTAT
TATGTTCGTAAAAAACCTGTATTGAAAATTAGTGAAGCTTCAAGACCTGTAATTGGTAAATATGCTGACGGCCCTCTAGG
GGTAATTATTGATATTTTATTTATCTTCGGTCTTCTAGGCGGTGCTGGAACGACGCTAGCCTTAGGTACGCCAATGATTG
CAGAAGGAATTAATCATTTAACGGGAATTCCTGTAACCCTTCCTTTACAAGCAATTATCATGATTATATGTACCGTTATT
TTTGCAATTAGTTCGTTTTCAGGGATTAATAAAGGAATCAAAAGACTAAGTGACTTAAACTTGTGGCTAGCTATTTTCAT
TCTCGCTTTTGTGTTTATTTTTGGACCGACGCTTTTCCTTAGTGAAATGACATTTACAAGCTTAGGAGTAATCGTTAATA
ACTTCTTCTCTATGGCTACATGGCTAGAACCAAAAGCAAATGTCCCAGGAGTTGAAGGTACTAATTTCCCTGAAAGTTGG
ACCGTCTTTTACTGGGCCTGGTGGCTTGTTTACGCTCCATTTGTCGGTTTATTCGTAGCGAGAATTTCTCGTGGTAGAAC
CATTAAAGAGATGATTCTCGGGACATTAATTTATGGAACGTTAGGTTGTGTATTGTTCTTTGGAATTCTTGGTAATTATG
GCTTATACCTACAGCTTTCCGGATCATTCGACGTTATTGGTTACATTAATGAATATAGTGCACCAGCAACGATTATTGCT
ATCCTTGATCAATTGCCACTAGCTTGGTTAGTAATCCCAATATTTACTGTTCTAGCAATTGTTTTCTTAGCTACAACATT
TGACTCAGCCTCTTATATTCTTGCTGCTGTAGCACAAAAACAAGTAACAAAAGGTGAGCCATTAAGATGGCATCGTTTGT
TCTGGGCATTCACGTTAATGATTTTACCTATGACACTTATGTTTATTGGCGGACTTGAAACACTACAAACCGCCAGTATT
GTTGCTGGTTTTCCTGTCATATTTATCATGATACTGTTAGCTTGGTCGTTCATGCGAGCTTCGACAAATGATTTAAACCA
AACAAAACAATCTAAATCAAGTTCTGCCATCATCGTTGATGTGGACAGAGATCAGAATCGTAAAGAAAAAAATAAATAA

Upstream 100 bases:

>100_bases
TTGGTATCGTAAATAATGTTTTGTAATTTAGTGAAGCACAAATCAGTGGATGATGTGTGTCGAGTAAAAGAAAAATAATG
AAACCATAGAAACGAGGTAA

Downstream 100 bases:

>100_bases
AGTAACAATCGGGCAATAAATGACCAAAAAGAAAAAGGGGTGGATGTTACCAGCCCCTTTTCCTGTTATTGAAGTTTATT
TTTCAAGCAATTTTAGTGAT

Product: choline transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 532; Mature: 532

Protein sequence:

>532_residues
MMNKRLIDWPTFIGALLILLTVVIPLILFPKAGSEVINSANRFVTGNFGILYLILGLSALIFILFVAFSRNGRIKLGGRD
VKKEFGTFSWAAMLFSAGIGSSILYWAMIEWAFYYQGPPFGITPESEEAINWAASYGIFHWGPIAWALYTLPALPIAYFY
YVRKKPVLKISEASRPVIGKYADGPLGVIIDILFIFGLLGGAGTTLALGTPMIAEGINHLTGIPVTLPLQAIIMIICTVI
FAISSFSGINKGIKRLSDLNLWLAIFILAFVFIFGPTLFLSEMTFTSLGVIVNNFFSMATWLEPKANVPGVEGTNFPESW
TVFYWAWWLVYAPFVGLFVARISRGRTIKEMILGTLIYGTLGCVLFFGILGNYGLYLQLSGSFDVIGYINEYSAPATIIA
ILDQLPLAWLVIPIFTVLAIVFLATTFDSASYILAAVAQKQVTKGEPLRWHRLFWAFTLMILPMTLMFIGGLETLQTASI
VAGFPVIFIMILLAWSFMRASTNDLNQTKQSKSSSAIIVDVDRDQNRKEKNK

Sequences:

>Translated_532_residues
MMNKRLIDWPTFIGALLILLTVVIPLILFPKAGSEVINSANRFVTGNFGILYLILGLSALIFILFVAFSRNGRIKLGGRD
VKKEFGTFSWAAMLFSAGIGSSILYWAMIEWAFYYQGPPFGITPESEEAINWAASYGIFHWGPIAWALYTLPALPIAYFY
YVRKKPVLKISEASRPVIGKYADGPLGVIIDILFIFGLLGGAGTTLALGTPMIAEGINHLTGIPVTLPLQAIIMIICTVI
FAISSFSGINKGIKRLSDLNLWLAIFILAFVFIFGPTLFLSEMTFTSLGVIVNNFFSMATWLEPKANVPGVEGTNFPESW
TVFYWAWWLVYAPFVGLFVARISRGRTIKEMILGTLIYGTLGCVLFFGILGNYGLYLQLSGSFDVIGYINEYSAPATIIA
ILDQLPLAWLVIPIFTVLAIVFLATTFDSASYILAAVAQKQVTKGEPLRWHRLFWAFTLMILPMTLMFIGGLETLQTASI
VAGFPVIFIMILLAWSFMRASTNDLNQTKQSKSSSAIIVDVDRDQNRKEKNK
>Mature_532_residues
MMNKRLIDWPTFIGALLILLTVVIPLILFPKAGSEVINSANRFVTGNFGILYLILGLSALIFILFVAFSRNGRIKLGGRD
VKKEFGTFSWAAMLFSAGIGSSILYWAMIEWAFYYQGPPFGITPESEEAINWAASYGIFHWGPIAWALYTLPALPIAYFY
YVRKKPVLKISEASRPVIGKYADGPLGVIIDILFIFGLLGGAGTTLALGTPMIAEGINHLTGIPVTLPLQAIIMIICTVI
FAISSFSGINKGIKRLSDLNLWLAIFILAFVFIFGPTLFLSEMTFTSLGVIVNNFFSMATWLEPKANVPGVEGTNFPESW
TVFYWAWWLVYAPFVGLFVARISRGRTIKEMILGTLIYGTLGCVLFFGILGNYGLYLQLSGSFDVIGYINEYSAPATIIA
ILDQLPLAWLVIPIFTVLAIVFLATTFDSASYILAAVAQKQVTKGEPLRWHRLFWAFTLMILPMTLMFIGGLETLQTASI
VAGFPVIFIMILLAWSFMRASTNDLNQTKQSKSSSAIIVDVDRDQNRKEKNK

Specific function: Unknown

COG id: COG1292

COG function: function code M; Choline-glycine betaine transporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BCCT transporter (TC 2.A.15) family [H]

Homologues:

Organism=Escherichia coli, GI1788102, Length=450, Percent_Identity=34.4444444444444, Blast_Score=298, Evalue=7e-82,
Organism=Escherichia coli, GI1786224, Length=479, Percent_Identity=32.5678496868476, Blast_Score=251, Evalue=6e-68,
Organism=Escherichia coli, GI1786506, Length=508, Percent_Identity=32.2834645669291, Blast_Score=241, Evalue=1e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000060
- InterPro:   IPR018093 [H]

Pfam domain/function: PF02028 BCCT [H]

EC number: NA

Molecular weight: Translated: 58931; Mature: 58931

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: PS01303 BCCT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNKRLIDWPTFIGALLILLTVVIPLILFPKAGSEVINSANRFVTGNFGILYLILGLSAL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEECCHHHHHHHHHHHHH
IFILFVAFSRNGRIKLGGRDVKKEFGTFSWAAMLFSAGIGSSILYWAMIEWAFYYQGPPF
HHHHHHHHCCCCEEEECCHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCC
GITPESEEAINWAASYGIFHWGPIAWALYTLPALPIAYFYYVRKKPVLKISEASRPVIGK
CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCC
YADGPLGVIIDILFIFGLLGGAGTTLALGTPMIAEGINHLTGIPVTLPLQAIIMIICTVI
CCCCHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
FAISSFSGINKGIKRLSDLNLWLAIFILAFVFIFGPTLFLSEMTFTSLGVIVNNFFSMAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLEPKANVPGVEGTNFPESWTVFYWAWWLVYAPFVGLFVARISRGRTIKEMILGTLIYGT
HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LGCVLFFGILGNYGLYLQLSGSFDVIGYINEYSAPATIIAILDQLPLAWLVIPIFTVLAI
HHHHHHHHHHCCCCEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VFLATTFDSASYILAAVAQKQVTKGEPLRWHRLFWAFTLMILPMTLMFIGGLETLQTASI
HHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
VAGFPVIFIMILLAWSFMRASTNDLNQTKQSKSSSAIIVDVDRDQNRKEKNK
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MMNKRLIDWPTFIGALLILLTVVIPLILFPKAGSEVINSANRFVTGNFGILYLILGLSAL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEECCHHHHHHHHHHHHH
IFILFVAFSRNGRIKLGGRDVKKEFGTFSWAAMLFSAGIGSSILYWAMIEWAFYYQGPPF
HHHHHHHHCCCCEEEECCHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCC
GITPESEEAINWAASYGIFHWGPIAWALYTLPALPIAYFYYVRKKPVLKISEASRPVIGK
CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCC
YADGPLGVIIDILFIFGLLGGAGTTLALGTPMIAEGINHLTGIPVTLPLQAIIMIICTVI
CCCCHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
FAISSFSGINKGIKRLSDLNLWLAIFILAFVFIFGPTLFLSEMTFTSLGVIVNNFFSMAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLEPKANVPGVEGTNFPESWTVFYWAWWLVYAPFVGLFVARISRGRTIKEMILGTLIYGT
HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LGCVLFFGILGNYGLYLQLSGSFDVIGYINEYSAPATIIAILDQLPLAWLVIPIFTVLAI
HHHHHHHHHHCCCCEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VFLATTFDSASYILAAVAQKQVTKGEPLRWHRLFWAFTLMILPMTLMFIGGLETLQTASI
HHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
VAGFPVIFIMILLAWSFMRASTNDLNQTKQSKSSSAIIVDVDRDQNRKEKNK
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]