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The map label for this gene is ycgA [H]

Identifier: 23098148

GI number: 23098148

Start: 728952

End: 730361

Strand: Reverse

Name: ycgA [H]

Synonym: OB0693

Alternate gene names: 23098148

Gene position: 730361-728952 (Counterclockwise)

Preceding gene: 161501982

Following gene: 23098147

Centisome position: 20.12

GC content: 35.6

Gene sequence:

>1410_bases
ATGGAGGACAAAAAAGATATTTCACAACAAAGAAAACATTCTAGATGGGTGATGCCTGATACGTATGTTATCCTGTTTTT
AGTATTGCTAGCAGCTTATATTGCGACATTTATTATTCCATCAGGTACTTTTGATCGAGAAAGTGTTGATGGTGTCGAAA
AGGTTATTCCTGGAACTTATCAGTCGACTGATGGAAATTCATTAGGTTTTCTAGATTTTTTCAACGCGATACAAACTGGT
ATGGTATCTTCTGCAGACATTATATTCTTAATATTGTTTACTGGTGGAATGTTTGAAATCATTGAACGTTCTGGAGCCTT
ACGGGGTGTGATTAATCAAGCTGTAAGACTTACTCGTGGAAATGAATTTTGGCTAATTGCAACTGTATCCACTATCTTTG
CACTCGTTGGAGCTGTCGGTGCAGTAGCAAATGCTGTAATTGCTTTTGTAATGGTTGGCGTCATTATTGCGAGAGCATTA
AAGCTTGATCCAATTGTTGCTATCGCTATAACGTTTGGAGCTAATTTCGTAGGATTTAGTGTTGGATTTTTAAATCCTTA
TACTGTTGGTATAGCACAAGATATTGCGGGGCTACCGCTATTTTCCGGAGCATTATTTCGAATAATTATATTTATCTTGA
TGCTAACAATAACAATTGCTTACACGTGGCGGTATGCAGAGAAAATCATGCAAAATAAAGAGATGAGTTTAATAGGAACA
TATGAAGCAGACGATGAGATGGACAGTTTAAATGCTCCTTTTACTACAAGGCATAAGTTATTATTAGGTTTTGTAACGCT
TAGTCTAGGCTTTTTCGTATACGGATCGATTCAACTAGAGTGGACAATAAATCATATGTCTGCATTCTTTATATTTATCT
CACTTGGTTCTGGGATTATTGCAGGAATGCATTATAATACTATAGCTGAAACATTTTTACATGGAGCTAGAAATCTTGTT
TATGGAGCACTAGTAGTAGGTTTAGCGAGATCAGTAATTGTTGTATTAGAAGAAGCAATGGTTATTGATACGATTGTATA
TGCATTATCCGTACCTCTTGAAAATTTATTACCAGTATTTTCTGCTATTGGTATGTTTATTTCGAATTCATTGCTTAACT
TTTTAGTCAATTCAGGTAGCGGACAAGCAATGATAGCAATGCCACTTCTATCTCCATTAGCTGACATGATTGGGGTAACT
AGACAAGTTGCTGTTCAATCTTATCAATTTGGGGATGGACTCACTAATTTAATCTTTCCTACGTCAGGAATTCTTATGGC
TAGTCTTGCTGTAGCTAAAGTACCTTATACAAAATGGCTAAAATGGGTATTCCCTCTATTTCTTATATGGCTAGTAATTG
CAATTATAGCTTTAATAATAGGAGTTCTCATTGAATGGGGTCCTATGTAG

Upstream 100 bases:

>100_bases
TGTCTTTTATTGAAAATAGTGATCAATACGATATAATTGAAAACTATATTTATGTATTTTTCTGATTTTAGTCTTTAAAT
ATTTACGTAGGAGGTAGGAT

Downstream 100 bases:

>100_bases
ACAGTAAAACACATCATTCCCATTAAAATATAATCATTCCTGAATAAATAGTTAGGTGTAATTACCTAATTATTTATTCA
AGCTAGTTGATATCCTTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MEDKKDISQQRKHSRWVMPDTYVILFLVLLAAYIATFIIPSGTFDRESVDGVEKVIPGTYQSTDGNSLGFLDFFNAIQTG
MVSSADIIFLILFTGGMFEIIERSGALRGVINQAVRLTRGNEFWLIATVSTIFALVGAVGAVANAVIAFVMVGVIIARAL
KLDPIVAIAITFGANFVGFSVGFLNPYTVGIAQDIAGLPLFSGALFRIIIFILMLTITIAYTWRYAEKIMQNKEMSLIGT
YEADDEMDSLNAPFTTRHKLLLGFVTLSLGFFVYGSIQLEWTINHMSAFFIFISLGSGIIAGMHYNTIAETFLHGARNLV
YGALVVGLARSVIVVLEEAMVIDTIVYALSVPLENLLPVFSAIGMFISNSLLNFLVNSGSGQAMIAMPLLSPLADMIGVT
RQVAVQSYQFGDGLTNLIFPTSGILMASLAVAKVPYTKWLKWVFPLFLIWLVIAIIALIIGVLIEWGPM

Sequences:

>Translated_469_residues
MEDKKDISQQRKHSRWVMPDTYVILFLVLLAAYIATFIIPSGTFDRESVDGVEKVIPGTYQSTDGNSLGFLDFFNAIQTG
MVSSADIIFLILFTGGMFEIIERSGALRGVINQAVRLTRGNEFWLIATVSTIFALVGAVGAVANAVIAFVMVGVIIARAL
KLDPIVAIAITFGANFVGFSVGFLNPYTVGIAQDIAGLPLFSGALFRIIIFILMLTITIAYTWRYAEKIMQNKEMSLIGT
YEADDEMDSLNAPFTTRHKLLLGFVTLSLGFFVYGSIQLEWTINHMSAFFIFISLGSGIIAGMHYNTIAETFLHGARNLV
YGALVVGLARSVIVVLEEAMVIDTIVYALSVPLENLLPVFSAIGMFISNSLLNFLVNSGSGQAMIAMPLLSPLADMIGVT
RQVAVQSYQFGDGLTNLIFPTSGILMASLAVAKVPYTKWLKWVFPLFLIWLVIAIIALIIGVLIEWGPM
>Mature_469_residues
MEDKKDISQQRKHSRWVMPDTYVILFLVLLAAYIATFIIPSGTFDRESVDGVEKVIPGTYQSTDGNSLGFLDFFNAIQTG
MVSSADIIFLILFTGGMFEIIERSGALRGVINQAVRLTRGNEFWLIATVSTIFALVGAVGAVANAVIAFVMVGVIIARAL
KLDPIVAIAITFGANFVGFSVGFLNPYTVGIAQDIAGLPLFSGALFRIIIFILMLTITIAYTWRYAEKIMQNKEMSLIGT
YEADDEMDSLNAPFTTRHKLLLGFVTLSLGFFVYGSIQLEWTINHMSAFFIFISLGSGIIAGMHYNTIAETFLHGARNLV
YGALVVGLARSVIVVLEEAMVIDTIVYALSVPLENLLPVFSAIGMFISNSLLNFLVNSGSGQAMIAMPLLSPLADMIGVT
RQVAVQSYQFGDGLTNLIFPTSGILMASLAVAKVPYTKWLKWVFPLFLIWLVIAIIALIIGVLIEWGPM

Specific function: Unknown

COG id: COG1288

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yfcC and H.influenzae HI_0594 [H]

Homologues:

Organism=Escherichia coli, GI87082082, Length=479, Percent_Identity=32.776617954071, Blast_Score=241, Evalue=6e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018387
- InterPro:   IPR018385 [H]

Pfam domain/function: PF03606 DcuC [H]

EC number: NA

Molecular weight: Translated: 51198; Mature: 51198

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDKKDISQQRKHSRWVMPDTYVILFLVLLAAYIATFIIPSGTFDRESVDGVEKVIPGTY
CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCC
QSTDGNSLGFLDFFNAIQTGMVSSADIIFLILFTGGMFEIIERSGALRGVINQAVRLTRG
CCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHCCC
NEFWLIATVSTIFALVGAVGAVANAVIAFVMVGVIIARALKLDPIVAIAITFGANFVGFS
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEHHCCHHHHEE
VGFLNPYTVGIAQDIAGLPLFSGALFRIIIFILMLTITIAYTWRYAEKIMQNKEMSLIGT
ECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC
YEADDEMDSLNAPFTTRHKLLLGFVTLSLGFFVYGSIQLEWTINHMSAFFIFISLGSGII
CCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHEEEEEEEEEEHHHHHHHHHHHHHCCCCE
AGMHYNTIAETFLHGARNLVYGALVVGLARSVIVVLEEAMVIDTIVYALSVPLENLLPVF
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
SAIGMFISNSLLNFLVNSGSGQAMIAMPLLSPLADMIGVTRQVAVQSYQFGDGLTNLIFP
HHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCC
TSGILMASLAVAKVPYTKWLKWVFPLFLIWLVIAIIALIIGVLIEWGPM
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEDKKDISQQRKHSRWVMPDTYVILFLVLLAAYIATFIIPSGTFDRESVDGVEKVIPGTY
CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCC
QSTDGNSLGFLDFFNAIQTGMVSSADIIFLILFTGGMFEIIERSGALRGVINQAVRLTRG
CCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHCCC
NEFWLIATVSTIFALVGAVGAVANAVIAFVMVGVIIARALKLDPIVAIAITFGANFVGFS
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEHHCCHHHHEE
VGFLNPYTVGIAQDIAGLPLFSGALFRIIIFILMLTITIAYTWRYAEKIMQNKEMSLIGT
ECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC
YEADDEMDSLNAPFTTRHKLLLGFVTLSLGFFVYGSIQLEWTINHMSAFFIFISLGSGII
CCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHEEEEEEEEEEHHHHHHHHHHHHHCCCCE
AGMHYNTIAETFLHGARNLVYGALVVGLARSVIVVLEEAMVIDTIVYALSVPLENLLPVF
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
SAIGMFISNSLLNFLVNSGSGQAMIAMPLLSPLADMIGVTRQVAVQSYQFGDGLTNLIFP
HHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCC
TSGILMASLAVAKVPYTKWLKWVFPLFLIWLVIAIIALIIGVLIEWGPM
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]