| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is glnP [H]
Identifier: 22127991
GI number: 22127991
Start: 4576991
End: 4577800
Strand: Reverse
Name: glnP [H]
Synonym: y4123
Alternate gene names: 22127991
Gene position: 4577800-4576991 (Counterclockwise)
Preceding gene: 22127992
Following gene: 22127989
Centisome position: 99.5
GC content: 50.25
Gene sequence:
>810_bases TTGAGGCTTGGGGTATGTGGCGTCAACAGCGAACCGTCGTCCGAGGGCACTGAGATGGATTTTACCATTATCGTTGATAA CTGGCGTTATCTGCTGTGGGGGACTTTCCCTGATGGCCCTCTGGGAGGGGCGGCATTGACCGTGGTGATCAGTATCATGG CTGGGGTAGCCTCAGCCGTATTAGGCACTGTGTTGGGCGTGGCATTGGCGATGTCCCGTGGTGTCTGGGCGGGAATATTG GCCGCTGTTTTGGGCTTATTCCGTGCGATTCCGGTGATTATGTTGATTTTTTGGACGTATTTCCTGCTACCGATCGTTTT TGGTGTGGATATACCTGAAATCACCACTGTGGTGTGTGCACTGGCGCTGATTGCTTCTGCTTATCTGGCTCATGCGGTAA AGGCCGGGATAATGGCTATTGGTGCCGGGCAGTGGCAAGCGGGGCTGTCGTTAGGTTTTAATCGCTGGCAGACCCTGTGG TTTATTGTATTGCCACAAGCGCTGCGCATGATGGTGCCGTCCTTTATTAATCAATGGATATCATTGATTAAAGATACATC GCTGGCTTATATCGTCGGAGTGAATGAGCTGACCTTTTTGGCTACACAGGTTAATAACCGCAGTATGGTTTACCCGATGG AAGTCTTTCTGTTTGTGGCATTGGTCTATTTTGTTTTATGTCTGGCGCTGGATCTACTGGCTAACGGCCTTAATCGCCGC TTTAGCCCACAGCATGCCATTAAAAACCAAAGCTCCATGGCACGTTCATGGCGCTGGTGGTGTAACAAGCTAACACTGCA ATCGAGTTAA
Upstream 100 bases:
>100_bases GAACTCTCCTATGCTTCCCGGCAGGTTGAAACTGAAACATTACGGACGTTTCAGGCATTCGGGGTTGCAACCCTATTGTA TATTTTCATCATCGCGCTAA
Downstream 100 bases:
>100_bases TTGATTATAGGCAGGCTAATTCATTACAGGTAAATTAATCGCGGGTGATATGCCAGCCTCTTTCCTTCCACAAATGAGGC AGTTGCTGAATATCCGTGAA
Product: amino acid ABC transport system permease
Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MRLGVCGVNSEPSSEGTEMDFTIIVDNWRYLLWGTFPDGPLGGAALTVVISIMAGVASAVLGTVLGVALAMSRGVWAGIL AAVLGLFRAIPVIMLIFWTYFLLPIVFGVDIPEITTVVCALALIASAYLAHAVKAGIMAIGAGQWQAGLSLGFNRWQTLW FIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVNELTFLATQVNNRSMVYPMEVFLFVALVYFVLCLALDLLANGLNRR FSPQHAIKNQSSMARSWRWWCNKLTLQSS
Sequences:
>Translated_269_residues MRLGVCGVNSEPSSEGTEMDFTIIVDNWRYLLWGTFPDGPLGGAALTVVISIMAGVASAVLGTVLGVALAMSRGVWAGIL AAVLGLFRAIPVIMLIFWTYFLLPIVFGVDIPEITTVVCALALIASAYLAHAVKAGIMAIGAGQWQAGLSLGFNRWQTLW FIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVNELTFLATQVNNRSMVYPMEVFLFVALVYFVLCLALDLLANGLNRR FSPQHAIKNQSSMARSWRWWCNKLTLQSS >Mature_269_residues MRLGVCGVNSEPSSEGTEMDFTIIVDNWRYLLWGTFPDGPLGGAALTVVISIMAGVASAVLGTVLGVALAMSRGVWAGIL AAVLGLFRAIPVIMLIFWTYFLLPIVFGVDIPEITTVVCALALIASAYLAHAVKAGIMAIGAGQWQAGLSLGFNRWQTLW FIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVNELTFLATQVNNRSMVYPMEVFLFVALVYFVLCLALDLLANGLNRR FSPQHAIKNQSSMARSWRWWCNKLTLQSS
Specific function: Part of the ABC transporter complex glnHMPQ involved in glutamine transport. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786873, Length=231, Percent_Identity=34.6320346320346, Blast_Score=114, Evalue=6e-27, Organism=Escherichia coli, GI1787030, Length=204, Percent_Identity=31.8627450980392, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1788226, Length=210, Percent_Identity=33.8095238095238, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI87082239, Length=209, Percent_Identity=31.1004784688995, Blast_Score=98, Evalue=5e-22, Organism=Escherichia coli, GI1787087, Length=225, Percent_Identity=25.7777777777778, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI48994930, Length=136, Percent_Identity=33.8235294117647, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1788646, Length=227, Percent_Identity=25.9911894273128, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1786874, Length=232, Percent_Identity=23.7068965517241, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1788645, Length=228, Percent_Identity=26.3157894736842, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 29466; Mature: 29466
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLGVCGVNSEPSSEGTEMDFTIIVDNWRYLLWGTFPDGPLGGAALTVVISIMAGVASAV CCEEECCCCCCCCCCCCCEEEEEEEECCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH LGTVLGVALAMSRGVWAGILAAVLGLFRAIPVIMLIFWTYFLLPIVFGVDIPEITTVVCA HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH LALIASAYLAHAVKAGIMAIGAGQWQAGLSLGFNRWQTLWFIVLPQALRMMVPSFINQWI HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLIKDTSLAYIVGVNELTFLATQVNNRSMVYPMEVFLFVALVYFVLCLALDLLANGLNRR HHHHCCCEEEEEECHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FSPQHAIKNQSSMARSWRWWCNKLTLQSS CCHHHHHCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRLGVCGVNSEPSSEGTEMDFTIIVDNWRYLLWGTFPDGPLGGAALTVVISIMAGVASAV CCEEECCCCCCCCCCCCCEEEEEEEECCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH LGTVLGVALAMSRGVWAGILAAVLGLFRAIPVIMLIFWTYFLLPIVFGVDIPEITTVVCA HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH LALIASAYLAHAVKAGIMAIGAGQWQAGLSLGFNRWQTLWFIVLPQALRMMVPSFINQWI HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLIKDTSLAYIVGVNELTFLATQVNNRSMVYPMEVFLFVALVYFVLCLALDLLANGLNRR HHHHCCCEEEEEECHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FSPQHAIKNQSSMARSWRWWCNKLTLQSS CCHHHHHCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7551042; 9384377 [H]