| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is glgA [H]
Identifier: 22127760
GI number: 22127760
Start: 4342187
End: 4343623
Strand: Direct
Name: glgA [H]
Synonym: y3889
Alternate gene names: 22127760
Gene position: 4342187-4343623 (Clockwise)
Preceding gene: 22127759
Following gene: 22127761
Centisome position: 94.38
GC content: 53.1
Gene sequence:
>1437_bases GTGATGATGAGGGTTTTACATGTATGTTCTGAGCTGTTCCCTTTACTAAAAACAGGCGGGTTGGCTGATGTTATCGGTGC TTTACCCGCAGCTCAGCTTGCCGAGGGGGCTGATGTGCGGATCATCTTGCCCGCCTTCCCGGATTTGCGTAGAGGGATCC CTGAGACCGTACTGGTCAGGGAGATTGACACTTTTGCGGGGCGGGTAGCATTACGCTATGGCCATTATCGGGGGATTGGC ATTTATCTGATTGATGCGCCAGCGCTCTATGATCGTGCGGGTAGCCCTTATCACGATGCTTCTTTATATGCCTATAGCGA TAACTATCTACGCTTTGCCTTGCTGGGATGGATGGCGTGCGAACTGGCTTGTGGCCTGGACGGTTACTGGCGTCCAGAGG TTGTCCATGCCCATGATTGGCACGCGGGATTAACCTGTGCTTATCTGGCTGCGCGTGGGCGGCCTGCACGATCGGTGTTT ACCGTCCATAATTTGGCTTATCAGGGGCTATTTTCTGCAGATCACTTATCTGAATTACACCTGCCCGCTGAGTTTTTCCA GATCTATGGGCTGGAGTTTTACGGGCAGATCTCTTATCTGAAAGCCGGGTTGTTCTTTGCCGACCATGTCACGACCGTCA GCCCGACCTATGCAAAAGAGATCACTCAGCCTGCTTTTGGCTATGGCATGGAGGGGTTGCTACAAGCATTGGCGCGTCAA GGCCGGTTGACGGGGATCCTGAACGGGGTCGACAGTGATATTTGGGATCCGCAGAGCGATACCTTGCTACCTACTCGTTA TGATGCGGAGAACCTGCAAGCAAAGGCCATCAATAAAACACATTTGCAAACGGCTATGGGTTTGCAACTGGCAGAAAATA AACCCATTTTTGCTGTTGTCAGTCGATTGACCGTCCAGAAAGGGTTGGATCTGGTATTGGAAGCACTGCCCGAATTACTG GCACTGGGGGGGCAGTTGGTCGTCTTGGGGAGCGGAGATGCCACGCTGCAAGAGGCATTTCTAGCCGCCGCAGCAGAGCA TTCTGGCCAGGTTGGGGTGCAAATAGGTTATCACGAGGCATTCTCTCATCGAATTATTGCCGGGTCGGATGTCATTCTGG TGCCCAGCCGCTTTGAACCCTGTGGGCTAACACAGTTGTATGGGTTGAAATATGGCACGTTGCCGCTGGTGCGACATACC GGTGGGCTGGCTGATACCGTGGTGGATTGCGCGTTGGAAAACCTGGCTGACGGCAGCGCTTCGGGATTTGTATTCAATGA ATGTGAGGCGCAAGCCTTAGTGAAGGCGATACGCCGTGCCTTTGTACTGTGGAGCAGGCCGAAGCATTGGCGTCACGTCC AGCGCCATGCGATGAGGCTCGACTTTGGTTGGCAACTTGCCGCCGTAGATTATTTGTCACTTTATCGACGTCTGTAA
Upstream 100 bases:
>100_bases TTGTTTTTCAAATTGGCGTCGATACAGGCCAGTCATTAGGGTGAAGGAAAGCAGCTAACACCACTGCAACTTCAGGTCAG AAGGGTATAAAAGAGCAGGA
Downstream 100 bases:
>100_bases TTGTTGAAACTGATAATTGTTGGAGCTGGTAATTGTTGGAGCTGGTAATCGTTGAAACTGGTAATTGTTAGCGCTCGTTA TTGTTGGCGCTCGTCATTGT
Product: glycogen synthase
Products: NA
Alternate protein names: Starch [bacterial glycogen] synthase [H]
Number of amino acids: Translated: 478; Mature: 478
Protein sequence:
>478_residues MMMRVLHVCSELFPLLKTGGLADVIGALPAAQLAEGADVRIILPAFPDLRRGIPETVLVREIDTFAGRVALRYGHYRGIG IYLIDAPALYDRAGSPYHDASLYAYSDNYLRFALLGWMACELACGLDGYWRPEVVHAHDWHAGLTCAYLAARGRPARSVF TVHNLAYQGLFSADHLSELHLPAEFFQIYGLEFYGQISYLKAGLFFADHVTTVSPTYAKEITQPAFGYGMEGLLQALARQ GRLTGILNGVDSDIWDPQSDTLLPTRYDAENLQAKAINKTHLQTAMGLQLAENKPIFAVVSRLTVQKGLDLVLEALPELL ALGGQLVVLGSGDATLQEAFLAAAAEHSGQVGVQIGYHEAFSHRIIAGSDVILVPSRFEPCGLTQLYGLKYGTLPLVRHT GGLADTVVDCALENLADGSASGFVFNECEAQALVKAIRRAFVLWSRPKHWRHVQRHAMRLDFGWQLAAVDYLSLYRRL
Sequences:
>Translated_478_residues MMMRVLHVCSELFPLLKTGGLADVIGALPAAQLAEGADVRIILPAFPDLRRGIPETVLVREIDTFAGRVALRYGHYRGIG IYLIDAPALYDRAGSPYHDASLYAYSDNYLRFALLGWMACELACGLDGYWRPEVVHAHDWHAGLTCAYLAARGRPARSVF TVHNLAYQGLFSADHLSELHLPAEFFQIYGLEFYGQISYLKAGLFFADHVTTVSPTYAKEITQPAFGYGMEGLLQALARQ GRLTGILNGVDSDIWDPQSDTLLPTRYDAENLQAKAINKTHLQTAMGLQLAENKPIFAVVSRLTVQKGLDLVLEALPELL ALGGQLVVLGSGDATLQEAFLAAAAEHSGQVGVQIGYHEAFSHRIIAGSDVILVPSRFEPCGLTQLYGLKYGTLPLVRHT GGLADTVVDCALENLADGSASGFVFNECEAQALVKAIRRAFVLWSRPKHWRHVQRHAMRLDFGWQLAAVDYLSLYRRL >Mature_478_residues MMMRVLHVCSELFPLLKTGGLADVIGALPAAQLAEGADVRIILPAFPDLRRGIPETVLVREIDTFAGRVALRYGHYRGIG IYLIDAPALYDRAGSPYHDASLYAYSDNYLRFALLGWMACELACGLDGYWRPEVVHAHDWHAGLTCAYLAARGRPARSVF TVHNLAYQGLFSADHLSELHLPAEFFQIYGLEFYGQISYLKAGLFFADHVTTVSPTYAKEITQPAFGYGMEGLLQALARQ GRLTGILNGVDSDIWDPQSDTLLPTRYDAENLQAKAINKTHLQTAMGLQLAENKPIFAVVSRLTVQKGLDLVLEALPELL ALGGQLVVLGSGDATLQEAFLAAAAEHSGQVGVQIGYHEAFSHRIIAGSDVILVPSRFEPCGLTQLYGLKYGTLPLVRHT GGLADTVVDCALENLADGSASGFVFNECEAQALVKAIRRAFVLWSRPKHWRHVQRHAMRLDFGWQLAAVDYLSLYRRL
Specific function: Synthesizes alpha-1,4-glucan chains using ADP-glucose [H]
COG id: COG0297
COG function: function code G; Glycogen synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789836, Length=476, Percent_Identity=71.4285714285714, Blast_Score=715, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011835 - InterPro: IPR001296 - InterPro: IPR013534 [H]
Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]
EC number: =2.4.1.21 [H]
Molecular weight: Translated: 52539; Mature: 52539
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMMRVLHVCSELFPLLKTGGLADVIGALPAAQLAEGADVRIILPAFPDLRRGIPETVLVR CHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHCCCCCEEEEECCCCHHHHCCCHHHHHH EIDTFAGRVALRYGHYRGIGIYLIDAPALYDRAGSPYHDASLYAYSDNYLRFALLGWMAC HHHHHHHHEEEEECCCCCEEEEEEECCHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHH ELACGLDGYWRPEVVHAHDWHAGLTCAYLAARGRPARSVFTVHNLAYQGLFSADHLSELH HHHHCCCCCCCCCEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHC LPAEFFQIYGLEFYGQISYLKAGLFFADHVTTVSPTYAKEITQPAFGYGMEGLLQALARQ CCHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHCCCHHHHHHHHHHC GRLTGILNGVDSDIWDPQSDTLLPTRYDAENLQAKAINKTHLQTAMGLQLAENKPIFAVV CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHCCEECCCCCHHHHH SRLTVQKGLDLVLEALPELLALGGQLVVLGSGDATLQEAFLAAAAEHSGQVGVQIGYHEA HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEHHHH FSHRIIAGSDVILVPSRFEPCGLTQLYGLKYGTLPLVRHTGGLADTVVDCALENLADGSA HCCEEEECCCEEEECCCCCCCCCHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCC SGFVFNECEAQALVKAIRRAFVLWSRPKHWRHVQRHAMRLDFGWQLAAVDYLSLYRRL CCCEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MMMRVLHVCSELFPLLKTGGLADVIGALPAAQLAEGADVRIILPAFPDLRRGIPETVLVR CHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHCCCCCEEEEECCCCHHHHCCCHHHHHH EIDTFAGRVALRYGHYRGIGIYLIDAPALYDRAGSPYHDASLYAYSDNYLRFALLGWMAC HHHHHHHHEEEEECCCCCEEEEEEECCHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHH ELACGLDGYWRPEVVHAHDWHAGLTCAYLAARGRPARSVFTVHNLAYQGLFSADHLSELH HHHHCCCCCCCCCEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHC LPAEFFQIYGLEFYGQISYLKAGLFFADHVTTVSPTYAKEITQPAFGYGMEGLLQALARQ CCHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHCCCHHHHHHHHHHC GRLTGILNGVDSDIWDPQSDTLLPTRYDAENLQAKAINKTHLQTAMGLQLAENKPIFAVV CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHCCEECCCCCHHHHH SRLTVQKGLDLVLEALPELLALGGQLVVLGSGDATLQEAFLAAAAEHSGQVGVQIGYHEA HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEHHHH FSHRIIAGSDVILVPSRFEPCGLTQLYGLKYGTLPLVRHTGGLADTVVDCALENLADGSA HCCEEEECCCEEEECCCCCCCCCHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCC SGFVFNECEAQALVKAIRRAFVLWSRPKHWRHVQRHAMRLDFGWQLAAVDYLSLYRRL CCCEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA