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The map label for this gene is ygiQ [C]

Identifier: 22127376

GI number: 22127376

Start: 3884192

End: 3885004

Strand: Reverse

Name: ygiQ [C]

Synonym: y3502

Alternate gene names: 22127376

Gene position: 3885004-3884192 (Counterclockwise)

Preceding gene: 22127377

Following gene: 22127374

Centisome position: 84.44

GC content: 51.91

Gene sequence:

>813_bases
GTGGGCGGTTATTTGAAAATCGCACCAGAGCATACTGAGGAAGGGCCGCTTTCTAAAATGATGAAACCGGGTATGGGCAG
CTATCAGCGCTTCAAGGAACTGTTTGATACTTACTCGAAACAGGCCGGTAAAGAGCAGTATTTGATCCCTTATTTCATCT
CCGCACATCCGGGTACTGAAGATAAAGATATGGTGAACCTGGCGCTGTGGCTGAAGAAAAACCGCTTCCGATTGGATCAG
GTGCAAAATTTCTATCCGTCACCGTTGGCTAACTCGACCACCATGTATTACACCGGTAAGAACCCGTTGGCGAAAGTGGA
TTATAAAAGTGAAGAGGTGGTGGTTCCCAAAGGGGATCGTCAACGGCGGTTACATAAAGCATTACTGCGTTATCATGATC
CGGCTAACTGGCCGATGCTCCGCAGTGCGCTTGAAGATATGGGGCTGCAACATTTGATTGGCGCTCGTCGTGAATGCCTG
GTGCCGGCTCCGACCTTGGAAGAGCAGCGTGAGGCACGCCGTGCTCTGCGCCACCACACACCGGCACTGACCAAGCACAC
ATCGATCACCCGCCAGCGCCAGCCGAGTAATAGAGCACCCGCAGCCTCTGCTGGCAAGAAGGCTCCGACGGTGGCCAATG
GCACTTCTTCAGCGCACAGTACTTCTGCAAACCAAAGTACGTCTGCAAATCAAAGTACTTCTGCAGCCCACAGTACGCTC
GCAACCAAAAAATCAGCGGGTAAAACGGGCGTAAATAAAGCTGCGGTCAATAAGCCATCTGCCGGATCCAGAGGGAAAAA
CAGGCAGCATTAA

Upstream 100 bases:

>100_bases
GTGATTTGAAAGGGATCAAAAAGATCCTGATCGCCTCCGGCGTTCGCTACGATTTGGCAGTAGAAGATCCGCGTTATATC
AAAGAGTTGGCCAGCCACAT

Downstream 100 bases:

>100_bases
GGGGTTATTGCTGGCCTGAAATCAGCGGTCAGATCCGAAAACTTCCGGGTCTGGCCCCAGCCGTTTACCGCAATCCAGTT
TGGTAATTGCCAGCAACTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MGGYLKIAPEHTEEGPLSKMMKPGMGSYQRFKELFDTYSKQAGKEQYLIPYFISAHPGTEDKDMVNLALWLKKNRFRLDQ
VQNFYPSPLANSTTMYYTGKNPLAKVDYKSEEVVVPKGDRQRRLHKALLRYHDPANWPMLRSALEDMGLQHLIGARRECL
VPAPTLEEQREARRALRHHTPALTKHTSITRQRQPSNRAPAASAGKKAPTVANGTSSAHSTSANQSTSANQSTSAAHSTL
ATKKSAGKTGVNKAAVNKPSAGSRGKNRQH

Sequences:

>Translated_270_residues
MGGYLKIAPEHTEEGPLSKMMKPGMGSYQRFKELFDTYSKQAGKEQYLIPYFISAHPGTEDKDMVNLALWLKKNRFRLDQ
VQNFYPSPLANSTTMYYTGKNPLAKVDYKSEEVVVPKGDRQRRLHKALLRYHDPANWPMLRSALEDMGLQHLIGARRECL
VPAPTLEEQREARRALRHHTPALTKHTSITRQRQPSNRAPAASAGKKAPTVANGTSSAHSTSANQSTSANQSTSAAHSTL
ATKKSAGKTGVNKAAVNKPSAGSRGKNRQH
>Mature_269_residues
GGYLKIAPEHTEEGPLSKMMKPGMGSYQRFKELFDTYSKQAGKEQYLIPYFISAHPGTEDKDMVNLALWLKKNRFRLDQV
QNFYPSPLANSTTMYYTGKNPLAKVDYKSEEVVVPKGDRQRRLHKALLRYHDPANWPMLRSALEDMGLQHLIGARRECLV
PAPTLEEQREARRALRHHTPALTKHTSITRQRQPSNRAPAASAGKKAPTVANGTSSAHSTSANQSTSANQSTSAAHSTLA
TKKSAGKTGVNKAAVNKPSAGSRGKNRQH

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0313 family [H]

Homologues:

Organism=Escherichia coli, GI48994917, Length=212, Percent_Identity=80.188679245283, Blast_Score=360, Evalue=1e-101,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR020612
- InterPro:   IPR007197
- InterPro:   IPR013704
- InterPro:   IPR022946 [H]

Pfam domain/function: PF04055 Radical_SAM; PF08497 Radical_SAM_N [H]

EC number: NA

Molecular weight: Translated: 29904; Mature: 29773

Theoretical pI: Translated: 10.73; Mature: 10.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGYLKIAPEHTEEGPLSKMMKPGMGSYQRFKELFDTYSKQAGKEQYLIPYFISAHPGTE
CCCCEECCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCC
DKDMVNLALWLKKNRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKVDYKSEEVVVPKGDR
CHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCEECCCCCCEEECCCCHH
QRRLHKALLRYHDPANWPMLRSALEDMGLQHLIGARRECLVPAPTLEEQREARRALRHHT
HHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHCC
PALTKHTSITRQRQPSNRAPAASAGKKAPTVANGTSSAHSTSANQSTSANQSTSAAHSTL
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
ATKKSAGKTGVNKAAVNKPSAGSRGKNRQH
HHHHHCCCCCCCHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GGYLKIAPEHTEEGPLSKMMKPGMGSYQRFKELFDTYSKQAGKEQYLIPYFISAHPGTE
CCCEECCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCC
DKDMVNLALWLKKNRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKVDYKSEEVVVPKGDR
CHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCEECCCCCCEEECCCCHH
QRRLHKALLRYHDPANWPMLRSALEDMGLQHLIGARRECLVPAPTLEEQREARRALRHHT
HHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHCC
PALTKHTSITRQRQPSNRAPAASAGKKAPTVANGTSSAHSTSANQSTSANQSTSAAHSTL
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
ATKKSAGKTGVNKAAVNKPSAGSRGKNRQH
HHHHHCCCCCCCHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]